RNA–Protein interactions for RNA: YGR074W

SMD1, Transcript of Core Sm protein Sm D1, yeastyeast

Gene SMD1, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD1YGR074W SKG6P32900 734 aaPredicted RBP1.76□□□□□ -2.13
SMD1YGR074W YUH1P35127 236 aa1.76□□□□□ -2.13
SMD1YGR074W YKL063CP35725 167 aa1.76□□□□□ -2.13
SMD1YGR074W YKL162CP36052 402 aa1.76□□□□□ -2.13
SMD1YGR074W ECM34P38728 170 aa1.76□□□□□ -2.13
SMD1YGR074W CTM1P38818 585 aa1.76□□□□□ -2.13
SMD1YGR074W GCD14P46959 383 aaPredicted RBP1.76□□□□□ -2.13
SMD1YGR074W YJR054WP47114 497 aa1.76□□□□□ -2.13
SMD1YGR074W YGL262WP53054 175 aa1.76□□□□□ -2.13
SMD1YGR074W RPN14P53196 417 aa1.76□□□□□ -2.13
SMD1YGR074W YGR015CP53208 328 aa1.76□□□□□ -2.13
SMD1YGR074W VHT1P53241 593 aa1.76□□□□□ -2.13
SMD1YGR074W RPL21AQ02753 160 aaKnown RBP1.76□□□□□ -2.13
SMD1YGR074W YPL077CQ02831 240 aa1.76□□□□□ -2.13
SMD1YGR074W MRX11Q03079 207 aa1.76□□□□□ -2.13
SMD1YGR074W CSI1Q04368 295 aa1.76□□□□□ -2.13
SMD1YGR074W ASR1Q06834 288 aa1.76□□□□□ -2.13
SMD1YGR074W YLR012CQ07927 99 aa1.76□□□□□ -2.13
SMD1YGR074W TMC1Q08422 150 aaPredicted RBP1.76□□□□□ -2.13
SMD1YGR074W RPN8Q08723 338 aaKnown RBP1.76□□□□□ -2.13
SMD1YGR074W YPL245WQ12179 454 aaKnown RBP1.76□□□□□ -2.13
SMD1YGR074W MCT1Q12283 360 aa1.76□□□□□ -2.13
SMD1YGR074W RPN6Q12377 434 aa1.76□□□□□ -2.13
SMD1YGR074W SPS100P13130 326 aa1.75□□□□□ -2.13
SMD1YGR074W MRPL20P22354 195 aaPredicted RBP1.75□□□□□ -2.13
SMD1YGR074W YSR3P23501 404 aa1.75□□□□□ -2.13
SMD1YGR074W SPS19P32573 292 aaKnown RBP1.75□□□□□ -2.13
SMD1YGR074W SPR1P32603 445 aa1.75□□□□□ -2.13
SMD1YGR074W DTR1P38125 572 aa1.75□□□□□ -2.13
SMD1YGR074W SHE1P38200 338 aa1.75□□□□□ -2.13
SMD1YGR074W SHE3P38272 425 aaKnown RBP1.75□□□□□ -2.13
SMD1YGR074W PET100P38958 111 aa1.75□□□□□ -2.13
SMD1YGR074W AGP3P43548 558 aa1.75□□□□□ -2.13
SMD1YGR074W PMT4P46971 762 aa1.75□□□□□ -2.13
SMD1YGR074W YPS5P53057 165 aa1.75□□□□□ -2.13
SMD1YGR074W SHE10P53075 577 aa1.75□□□□□ -2.13
SMD1YGR074W YGL185CP53100 379 aa1.75□□□□□ -2.13
SMD1YGR074W BIO4P53630 237 aa1.75□□□□□ -2.13
SMD1YGR074W TPS1Q00764 495 aaKnown RBP1.75□□□□□ -2.13
SMD1YGR074W MRPS16Q02608 121 aa1.75□□□□□ -2.13
SMD1YGR074W ATC1Q04005 294 aa1.75□□□□□ -2.13
SMD1YGR074W ECM18Q04623 453 aa1.75□□□□□ -2.13
SMD1YGR074W MHR1Q06630 226 aa1.75□□□□□ -2.13
SMD1YGR074W MMT2Q08970 484 aa1.75□□□□□ -2.13
SMD1YGR074W TAF10Q12030 206 aa1.75□□□□□ -2.13
SMD1YGR074W VIK1Q12045 647 aa1.75□□□□□ -2.13
SMD1YGR074W SLM3Q12093 417 aa1.75□□□□□ -2.13
SMD1YGR074W POM33Q12164 279 aa1.75□□□□□ -2.13
SMD1YGR074W YPR064WQ12492 139 aa1.75□□□□□ -2.13
SMD1YGR074W FMP16Q12497 93 aa1.75□□□□□ -2.13
SMD1YGR074W SSK22P25390 1331 aaPredicted RBP1.74□□□□□ -2.13
SMD1YGR074W RPL31AP0C2H8 113 aaKnown RBP1.74□□□□□ -2.13
SMD1YGR074W HSP26P15992 214 aaKnown RBP RIP-Chip data1.74□□□□□ -2.13not detected
SMD1YGR074W PCL1P24867 279 aa1.74□□□□□ -2.13
SMD1YGR074W ZIP1P31111 875 aa1.74□□□□□ -2.13
SMD1YGR074W PDC2P32896 925 aa1.74□□□□□ -2.13
SMD1YGR074W GGC1P38988 300 aa1.74□□□□□ -2.13
SMD1YGR074W SOP4P39543 234 aaPredicted RBP1.74□□□□□ -2.13
SMD1YGR074W HEM14P40012 539 aa1.74□□□□□ -2.13
SMD1YGR074W FAR10Q06001 478 aa1.74□□□□□ -2.13
SMD1YGR074W APC9Q12107 265 aa1.74□□□□□ -2.13
SMD1YGR074W RRP36Q12481 300 aaPredicted RBP1.74□□□□□ -2.13
SMD1YGR074W LAG2Q92325 660 aa1.74□□□□□ -2.13
SMD1YGR074W BI3Q9ZZW7 517 aa1.74□□□□□ -2.13
SMD1YGR074W INO80P53115 1489 aa1.74□□□□□ -2.13
SMD1YGR074W CCH1P50077 2039 aa1.73□□□□□ -2.13
SMD1YGR074W TDH3P00359 332 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SMD1YGR074W MRP1P10662 321 aaKnown RBP1.73□□□□□ -2.13
SMD1YGR074W MRPL6P32904 214 aa1.73□□□□□ -2.13
SMD1YGR074W CBF5P33322 483 aaKnown RBP RIP-Chip data1.73□□□□□ -2.13not detected
SMD1YGR074W YKL187CP34231 750 aa1.73□□□□□ -2.13
SMD1YGR074W MCH2P36032 473 aa1.73□□□□□ -2.13
SMD1YGR074W RPC37P36121 282 aa1.73□□□□□ -2.13
SMD1YGR074W UTH1P36135 365 aa1.73□□□□□ -2.13
SMD1YGR074W TAE1P38340 232 aa1.73□□□□□ -2.13
SMD1YGR074W SMC2P38989 1170 aaKnown RBP1.73□□□□□ -2.13
SMD1YGR074W RCY1P39531 840 aa1.73□□□□□ -2.13
SMD1YGR074W YIL054WP40524 105 aa1.73□□□□□ -2.13
SMD1YGR074W COG7P53195 279 aa1.73□□□□□ -2.13
SMD1YGR074W CPD1P53314 239 aa1.73□□□□□ -2.13
SMD1YGR074W YLR152CP54072 576 aa1.73□□□□□ -2.13
SMD1YGR074W SPP2Q02521 185 aa1.73□□□□□ -2.13
SMD1YGR074W RMI1Q02685 241 aa1.73□□□□□ -2.13
SMD1YGR074W RRN5Q02983 363 aa1.73□□□□□ -2.13
SMD1YGR074W ADD37Q03233 198 aa1.73□□□□□ -2.13
SMD1YGR074W YMR209CQ03648 457 aa1.73□□□□□ -2.13
SMD1YGR074W VHS1Q03785 461 aa1.73□□□□□ -2.13
SMD1YGR074W UTP15Q04305 513 aaKnown RBP1.73□□□□□ -2.13
SMD1YGR074W GMC1Q04399 608 aa1.73□□□□□ -2.13
SMD1YGR074W KAP95Q06142 861 aaKnown RBP1.73□□□□□ -2.13
SMD1YGR074W BTS1Q12051 335 aa1.73□□□□□ -2.13
SMD1YGR074W PRP46Q12417 451 aaPredicted RBP1.73□□□□□ -2.13
SMD1YGR074W ATP6P00854 259 aa1.72□□□□□ -2.13
SMD1YGR074W CBP6P07253 162 aaPredicted RBP1.72□□□□□ -2.13
SMD1YGR074W MRPS9P38120 278 aa1.72□□□□□ -2.13
SMD1YGR074W CHL4P38907 458 aa1.72□□□□□ -2.13
SMD1YGR074W YER184CP39961 794 aa1.72□□□□□ -2.13
SMD1YGR074W YFL012WP43580 148 aa1.72□□□□□ -2.13
SMD1YGR074W FMP48P53233 369 aa1.72□□□□□ -2.13
SMD1YGR074W YNR066CP53752 436 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 87.1 ms