RNA–Protein interactions for RNA: YFR054C

YFR054C, Transcript of Dubious open reading frame, yeastyeast

Gene YFR054C, Length 579 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YFR054CYFR054C VHT1P53241 593 aa2.46□□□□□ -2.02
YFR054CYFR054C GIS2P53849 153 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
YFR054CYFR054C HAL1Q01766 294 aa2.46□□□□□ -2.02
YFR054CYFR054C SNX41Q04053 625 aa2.46□□□□□ -2.02
YFR054CYFR054C CSI1Q04368 295 aa2.46□□□□□ -2.02
YFR054CYFR054C GPN3Q06543 272 aa2.46□□□□□ -2.02
YFR054CYFR054C MCH1Q07376 486 aa2.46□□□□□ -2.02
YFR054CYFR054C APC9Q12107 265 aa2.46□□□□□ -2.02
YFR054CYFR054C TFC7Q12415 435 aa2.46□□□□□ -2.02
YFR054CYFR054C FMP16Q12497 93 aa2.46□□□□□ -2.02
YFR054CYFR054C RPL24AP04449 155 aaKnown RBP2.45□□□□□ -2.02
YFR054CYFR054C SPS100P13130 326 aa2.45□□□□□ -2.02
YFR054CYFR054C LDB16P25587 256 aa2.45□□□□□ -2.02
YFR054CYFR054C SPR1P32603 445 aa2.45□□□□□ -2.02
YFR054CYFR054C PDC2P32896 925 aa2.45□□□□□ -2.02
YFR054CYFR054C SHE1P38200 338 aa2.45□□□□□ -2.02
YFR054CYFR054C SHE3P38272 425 aaKnown RBP2.45□□□□□ -2.02
YFR054CYFR054C PET100P38958 111 aa2.45□□□□□ -2.02
YFR054CYFR054C BIO4P53630 237 aa2.45□□□□□ -2.02
YFR054CYFR054C SED5Q01590 340 aa2.45□□□□□ -2.02
YFR054CYFR054C YPL077CQ02831 240 aa2.45□□□□□ -2.02
YFR054CYFR054C MRX11Q03079 207 aa2.45□□□□□ -2.02
YFR054CYFR054C MHR1Q06630 226 aa2.45□□□□□ -2.02
YFR054CYFR054C ASR1Q06834 288 aa2.45□□□□□ -2.02
YFR054CYFR054C MMT2Q08970 484 aa2.45□□□□□ -2.02
YFR054CYFR054C YPL245WQ12179 454 aaKnown RBP2.45□□□□□ -2.02
YFR054CYFR054C PSK1P31374 1356 aa2.45□□□□□ -2.02
YFR054CYFR054C ILV1P00927 576 aaKnown RBP2.44□□□□□ -2.02
YFR054CYFR054C EPT1P22140 391 aa2.44□□□□□ -2.02
YFR054CYFR054C PCL1P24867 279 aa2.44□□□□□ -2.02
YFR054CYFR054C CBF5P33322 483 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
YFR054CYFR054C YUH1P35127 236 aa2.44□□□□□ -2.02
YFR054CYFR054C YKL063CP35725 167 aa2.44□□□□□ -2.02
YFR054CYFR054C SOP4P39543 234 aaPredicted RBP2.44□□□□□ -2.02
YFR054CYFR054C AGP3P43548 558 aa2.44□□□□□ -2.02
YFR054CYFR054C YPS5P53057 165 aa2.44□□□□□ -2.02
YFR054CYFR054C VEL1P53058 206 aa2.44□□□□□ -2.02
YFR054CYFR054C SHE10P53075 577 aa2.44□□□□□ -2.02
YFR054CYFR054C YLR152CP54072 576 aa2.44□□□□□ -2.02
YFR054CYFR054C MRPS16Q02608 121 aa2.44□□□□□ -2.02
YFR054CYFR054C RPL21AQ02753 160 aaKnown RBP2.44□□□□□ -2.02
YFR054CYFR054C FAR10Q06001 478 aa2.44□□□□□ -2.02
YFR054CYFR054C POM33Q12164 279 aa2.44□□□□□ -2.02
YFR054CYFR054C PRP46Q12417 451 aaPredicted RBP2.44□□□□□ -2.02
YFR054CYFR054C SAL1D6W196 494 aa2.43□□□□□ -2.02
YFR054CYFR054C RPL31AP0C2H8 113 aaKnown RBP2.43□□□□□ -2.02
YFR054CYFR054C VPS1P21576 704 aaKnown RBP2.43□□□□□ -2.02
YFR054CYFR054C MRPL20P22354 195 aaPredicted RBP2.43□□□□□ -2.02
YFR054CYFR054C YSR3P23501 404 aa2.43□□□□□ -2.02
YFR054CYFR054C IFM1P25038 676 aa2.43□□□□□ -2.02
YFR054CYFR054C SPS19P32573 292 aaKnown RBP2.43□□□□□ -2.02
YFR054CYFR054C SKG6P32900 734 aaPredicted RBP2.43□□□□□ -2.02
YFR054CYFR054C CHL4P38907 458 aa2.43□□□□□ -2.02
YFR054CYFR054C RCY1P39531 840 aa2.43□□□□□ -2.02
YFR054CYFR054C YGL262WP53054 175 aa2.43□□□□□ -2.02
YFR054CYFR054C TPS1Q00764 495 aaKnown RBP2.43□□□□□ -2.02
YFR054CYFR054C SPP2Q02521 185 aa2.43□□□□□ -2.02
YFR054CYFR054C RMI1Q02685 241 aa2.43□□□□□ -2.02
YFR054CYFR054C ATC1Q04005 294 aa2.43□□□□□ -2.02
YFR054CYFR054C KAP95Q06142 861 aaKnown RBP2.43□□□□□ -2.02
YFR054CYFR054C YPR064WQ12492 139 aa2.43□□□□□ -2.02
YFR054CYFR054C SSK22P25390 1331 aaPredicted RBP2.42□□□□□ -2.02
YFR054CYFR054C TDH3P00359 332 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YFR054CYFR054C ATP6P00854 259 aa2.42□□□□□ -2.02
YFR054CYFR054C HSP26P15992 214 aaKnown RBP RIP-Chip data2.42□□□□□ -2.02not detected
YFR054CYFR054C HPR1P17629 752 aaKnown RBP2.42□□□□□ -2.02
YFR054CYFR054C MCH2P36032 473 aa2.42□□□□□ -2.02
YFR054CYFR054C RPC37P36121 282 aa2.42□□□□□ -2.02
YFR054CYFR054C ECM34P38728 170 aa2.42□□□□□ -2.02
YFR054CYFR054C GGC1P38988 300 aa2.42□□□□□ -2.02
YFR054CYFR054C ALD5P40047 520 aaKnown RBP2.42□□□□□ -2.02
YFR054CYFR054C SCS7Q03529 384 aa2.42□□□□□ -2.02
YFR054CYFR054C YOR376WQ08900 122 aa2.42□□□□□ -2.02
YFR054CYFR054C VIK1Q12045 647 aa2.42□□□□□ -2.02
YFR054CYFR054C LAG2Q92325 660 aa2.42□□□□□ -2.02
YFR054CYFR054C FRS2P15625 503 aaKnown RBP2.41□□□□□ -2.02
YFR054CYFR054C YOX1P34161 385 aa2.41□□□□□ -2.02
YFR054CYFR054C YKL187CP34231 750 aa2.41□□□□□ -2.02
YFR054CYFR054C UTH1P36135 365 aa2.41□□□□□ -2.02
YFR054CYFR054C TAE1P38340 232 aa2.41□□□□□ -2.02
YFR054CYFR054C RCK1P38622 512 aa2.41□□□□□ -2.02
YFR054CYFR054C TIS11P47977 285 aa2.41□□□□□ -2.02
YFR054CYFR054C UBC13P52490 153 aa2.41□□□□□ -2.02
YFR054CYFR054C RRN5Q02983 363 aa2.41□□□□□ -2.02
YFR054CYFR054C ADD37Q03233 198 aa2.41□□□□□ -2.02
YFR054CYFR054C GMC1Q04399 608 aa2.41□□□□□ -2.02
YFR054CYFR054C BI3Q9ZZW7 517 aa2.41□□□□□ -2.02
YFR054CYFR054C CBP6P07253 162 aaPredicted RBP2.4□□□□□ -2.03
YFR054CYFR054C NOP1P15646 327 aaKnown RBP2.4□□□□□ -2.03
YFR054CYFR054C GCG1P32656 232 aaKnown RBP2.4□□□□□ -2.03
YFR054CYFR054C MRPL27P36526 146 aaPredicted RBP2.4□□□□□ -2.03
YFR054CYFR054C RFT1P38206 574 aaPredicted RBP2.4□□□□□ -2.03
YFR054CYFR054C SDS24P38314 527 aa2.4□□□□□ -2.03
YFR054CYFR054C PET8P38921 284 aa2.4□□□□□ -2.03
YFR054CYFR054C SMC2P38989 1170 aaKnown RBP2.4□□□□□ -2.03
YFR054CYFR054C SLM1P40485 686 aa2.4□□□□□ -2.03
YFR054CYFR054C GDS1P41913 522 aa2.4□□□□□ -2.03
YFR054CYFR054C FMP33P46998 180 aa2.4□□□□□ -2.03
YFR054CYFR054C SDS23P53172 527 aa2.4□□□□□ -2.03
YFR054CYFR054C TPC1P53257 314 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 35.7 ms