RNA–Protein interactions for RNA: YFR034C

PHO4, Transcript of Basic helix-loop-helix (bHLH) transcription factor of the myc-family, yeastyeast

Gene PHO4, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHO4YFR034C MDH3P32419 343 aaKnown RBP RIP-Chip data11.72□□□□□ -0.53not detected
PHO4YFR034C EMP70P32802 667 aa11.72□□□□□ -0.53
PHO4YFR034C GPX1P36014 167 aa11.72□□□□□ -0.53
PHO4YFR034C SHR5P41912 237 aa11.72□□□□□ -0.53
PHO4YFR034C SFH5P47008 294 aa11.72□□□□□ -0.53
PHO4YFR034C EKI1Q03764 534 aa11.72□□□□□ -0.53
PHO4YFR034C PAL1Q05518 499 aaKnown RBP11.72□□□□□ -0.53
PHO4YFR034C YPL199CQ08954 240 aa11.72□□□□□ -0.53
PHO4YFR034C YPR1Q12458 312 aa11.72□□□□□ -0.53
PHO4YFR034C FAS1P07149 2051 aaKnown RBP11.71□□□□□ -0.53
PHO4YFR034C PUT3P25502 979 aaPredicted RBP11.71□□□□□ -0.53
PHO4YFR034C HOM6P31116 359 aaKnown RBP11.71□□□□□ -0.53
PHO4YFR034C PMT2P31382 759 aa11.71□□□□□ -0.53
PHO4YFR034C TRS65P32893 560 aa11.71□□□□□ -0.53
PHO4YFR034C SLC1P33333 303 aa11.71□□□□□ -0.53
PHO4YFR034C TMA19P35691 167 aaKnown RBP11.71□□□□□ -0.53
PHO4YFR034C SHE2P36068 246 aaKnown RBP RIP-Chip data11.71□□□□□ -0.53not detected
PHO4YFR034C CHK1P38147 527 aa11.71□□□□□ -0.53
PHO4YFR034C MTC4P38335 694 aaKnown RBP11.71□□□□□ -0.53
PHO4YFR034C YHR210CP38893 341 aa11.71□□□□□ -0.53
PHO4YFR034C FET3P38993 636 aa11.71□□□□□ -0.53
PHO4YFR034C PHO90P39535 881 aa11.71□□□□□ -0.53
PHO4YFR034C SNO3P43544 222 aa11.71□□□□□ -0.53
PHO4YFR034C OGG1P53397 376 aaPredicted RBP11.71□□□□□ -0.53
PHO4YFR034C COQ10Q08058 207 aa11.71□□□□□ -0.53
PHO4YFR034C YOL073CQ08232 322 aa11.71□□□□□ -0.53
PHO4YFR034C QCR7P00128 127 aa11.7□□□□□ -0.54
PHO4YFR034C PHO4P07270 312 aaKnown RBP11.7□□□□□ -0.54
PHO4YFR034C NCP1P16603 691 aaKnown RBP11.7□□□□□ -0.54
PHO4YFR034C DBF2P22204 572 aa11.7□□□□□ -0.54
PHO4YFR034C ACH1P32316 526 aa11.7□□□□□ -0.54
PHO4YFR034C DOA4P32571 926 aa11.7□□□□□ -0.54
PHO4YFR034C VPS17P32913 551 aa11.7□□□□□ -0.54
PHO4YFR034C CCZ1P38273 704 aa11.7□□□□□ -0.54
PHO4YFR034C YNL208WP40159 199 aaKnown RBP11.7□□□□□ -0.54
PHO4YFR034C PMT6P42934 759 aa11.7□□□□□ -0.54
PHO4YFR034C PMT5P52867 743 aa11.7□□□□□ -0.54
PHO4YFR034C TPN1P53099 579 aa11.7□□□□□ -0.54
PHO4YFR034C ERV29P53337 310 aa11.7□□□□□ -0.54
PHO4YFR034C MPP6P53725 186 aaPredicted RBP11.7□□□□□ -0.54
PHO4YFR034C RHO5P53879 331 aaKnown RBP11.7□□□□□ -0.54
PHO4YFR034C HLR1Q04429 423 aa11.7□□□□□ -0.54
PHO4YFR034C YMR252CQ04814 134 aa11.7□□□□□ -0.54
PHO4YFR034C SEI1Q06058 285 aa11.7□□□□□ -0.54
PHO4YFR034C YPR109WQ06104 294 aa11.7□□□□□ -0.54
PHO4YFR034C RRP9Q06506 573 aaKnown RBP11.7□□□□□ -0.54
PHO4YFR034C MRPL35Q06678 367 aa11.7□□□□□ -0.54
PHO4YFR034C RDR1Q08904 546 aa11.7□□□□□ -0.54
PHO4YFR034C MCP1Q12106 302 aa11.7□□□□□ -0.54
PHO4YFR034C TIR4Q12218 487 aaPredicted RBP11.7□□□□□ -0.54
PHO4YFR034C RLM1Q12224 676 aa11.7□□□□□ -0.54
PHO4YFR034C PRP46Q12417 451 aaPredicted RBP11.7□□□□□ -0.54
PHO4YFR034C MRP1P10662 321 aaKnown RBP11.69□□□□□ -0.54
PHO4YFR034C MSN4P33749 630 aa11.69□□□□□ -0.54
PHO4YFR034C ANR2P36090 516 aaPredicted RBP11.69□□□□□ -0.54
PHO4YFR034C VBA2P38358 474 aaKnown RBP11.69□□□□□ -0.54
PHO4YFR034C YHR180WP38868 163 aa11.69□□□□□ -0.54
PHO4YFR034C YKE4P40544 346 aa11.69□□□□□ -0.54
PHO4YFR034C YFR054CP43622 192 aa11.69□□□□□ -0.54
PHO4YFR034C HRT1Q08273 121 aa11.69□□□□□ -0.54
PHO4YFR034C SET6Q12529 373 aa11.69□□□□□ -0.54
PHO4YFR034C ARF1P11076 181 aaKnown RBP11.68□□□□□ -0.54
PHO4YFR034C STE12P13574 688 aa11.68□□□□□ -0.54
PHO4YFR034C BOS1P25385 244 aa11.68□□□□□ -0.54
PHO4YFR034C HIS7P33734 552 aaKnown RBP11.68□□□□□ -0.54
PHO4YFR034C MTH1P35198 433 aa11.68□□□□□ -0.54
PHO4YFR034C MLH1P38920 769 aa11.68□□□□□ -0.54
PHO4YFR034C YJL193WP39542 402 aa11.68□□□□□ -0.54
PHO4YFR034C DUG1P43616 481 aaKnown RBP11.68□□□□□ -0.54
PHO4YFR034C SAY1P53324 424 aa11.68□□□□□ -0.54
PHO4YFR034C MRPL1Q04599 285 aa11.68□□□□□ -0.54
PHO4YFR034C TPO3Q06451 622 aa11.68□□□□□ -0.54
PHO4YFR034C BTS1Q12051 335 aa11.68□□□□□ -0.54
PHO4YFR034C YLR125WQ12138 136 aa11.68□□□□□ -0.54
PHO4YFR034C YOS9Q99220 542 aa11.68□□□□□ -0.54
PHO4YFR034C TAD3Q9URQ3 322 aa11.68□□□□□ -0.54
PHO4YFR034C COX9P07255 59 aa11.67□□□□□ -0.54
PHO4YFR034C RPS18AP0CX55 146 aaKnown RBP11.67□□□□□ -0.54
PHO4YFR034C RPS18BP0CX56 146 aaPredicted RBP11.67□□□□□ -0.54
PHO4YFR034C CDC26P14724 124 aa11.67□□□□□ -0.54
PHO4YFR034C PAD1P33751 242 aaKnown RBP RIP-Chip data11.67□□□□□ -0.54not detected
PHO4YFR034C ASK10P48361 1146 aa11.67□□□□□ -0.54
PHO4YFR034C MRPL13Q02204 264 aa11.67□□□□□ -0.54
PHO4YFR034C PLB2Q03674 706 aa11.67□□□□□ -0.54
PHO4YFR034C RBS1Q05672 457 aaKnown RBP11.67□□□□□ -0.54
PHO4YFR034C AIM6Q07716 390 aa11.67□□□□□ -0.54
PHO4YFR034C YOR378WQ08902 515 aa11.67□□□□□ -0.54
PHO4YFR034C YOR283WQ12040 230 aaKnown RBP11.67□□□□□ -0.54
PHO4YFR034C PAR32Q12515 295 aaKnown RBP11.67□□□□□ -0.54
PHO4YFR034C HOP09932 586 aa11.66□□□□□ -0.54
PHO4YFR034C HOM3P10869 527 aa11.66□□□□□ -0.54
PHO4YFR034C GAS1P22146 559 aaKnown RBP11.66□□□□□ -0.54
PHO4YFR034C CWH43P25618 953 aa11.66□□□□□ -0.54
PHO4YFR034C HSP150P32478 413 aa11.66□□□□□ -0.54
PHO4YFR034C PAU2P32612 120 aa11.66□□□□□ -0.54
PHO4YFR034C ALG3P38179 458 aa11.66□□□□□ -0.54
PHO4YFR034C NAS2P40555 220 aa11.66□□□□□ -0.54
PHO4YFR034C BAP3P41815 604 aa11.66□□□□□ -0.54
PHO4YFR034C RPE1P46969 238 aa11.66□□□□□ -0.54
PHO4YFR034C LCL3P53153 274 aa11.66□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 38.7 ms