RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W RPL18AP0CX49 186 aaKnown RBP1.64□□□□□ -2.15
VPS52YDR484W RPL18BP0CX50 186 aaKnown RBP1.64□□□□□ -2.15
VPS52YDR484W IME2P32581 645 aa1.64□□□□□ -2.15
VPS52YDR484W SRB2P34162 210 aa1.64□□□□□ -2.15
VPS52YDR484W YMR262WP38430 313 aa1.64□□□□□ -2.15
VPS52YDR484W RCK1P38622 512 aa1.64□□□□□ -2.15
VPS52YDR484W SLM1P40485 686 aa1.64□□□□□ -2.15
VPS52YDR484W UTP25P40498 721 aaKnown RBP1.64□□□□□ -2.15
VPS52YDR484W YIL059CP40520 121 aa1.64□□□□□ -2.15
VPS52YDR484W COS4P43542 379 aa1.64□□□□□ -2.15
VPS52YDR484W MGR3Q04472 501 aa1.64□□□□□ -2.15
VPS52YDR484W BI3Q9ZZW7 517 aa1.64□□□□□ -2.15
VPS52YDR484W CDC37P06101 506 aaKnown RBP1.63□□□□□ -2.15
VPS52YDR484W SPS100P13130 326 aa1.63□□□□□ -2.15
VPS52YDR484W TPM1P17536 199 aaKnown RBP1.63□□□□□ -2.15
VPS52YDR484W TRX1P22217 103 aaKnown RBP1.63□□□□□ -2.15
VPS52YDR484W AGA2P32781 87 aa1.63□□□□□ -2.15
VPS52YDR484W DSE1P40077 573 aa1.63□□□□□ -2.15
VPS52YDR484W ASG7P46993 209 aa1.63□□□□□ -2.15
VPS52YDR484W IRC4Q03036 179 aa1.63□□□□□ -2.15
VPS52YDR484W UBX2Q04228 584 aa1.63□□□□□ -2.15
VPS52YDR484W TRM10Q12400 293 aa1.63□□□□□ -2.15
VPS52YDR484W ERD1P16151 362 aa1.62□□□□□ -2.15
VPS52YDR484W YHR035WP38769 630 aa1.62□□□□□ -2.15
VPS52YDR484W INA22P40576 216 aa1.62□□□□□ -2.15
VPS52YDR484W YGL118CP53132 145 aa1.62□□□□□ -2.15
VPS52YDR484W CAX4P53223 239 aa1.62□□□□□ -2.15
VPS52YDR484W RFM1Q12192 310 aa1.62□□□□□ -2.15
VPS52YDR484W MRPL20P22354 195 aaPredicted RBP1.62□□□□□ -2.15
VPS52YDR484W RPB9P27999 122 aa1.62□□□□□ -2.15
VPS52YDR484W YPS1P32329 569 aa1.62□□□□□ -2.15
VPS52YDR484W YNR066CP53752 436 aa1.62□□□□□ -2.15
VPS52YDR484W STE23Q06010 1027 aa1.62□□□□□ -2.15
VPS52YDR484W MIM1Q08176 113 aa1.62□□□□□ -2.15
VPS52YDR484W VIK1Q12045 647 aa1.62□□□□□ -2.15
VPS52YDR484W TFC7Q12415 435 aa1.62□□□□□ -2.15
VPS52YDR484W PRP46Q12417 451 aaPredicted RBP1.62□□□□□ -2.15
VPS52YDR484W PET18P25362 215 aa1.61□□□□□ -2.15
VPS52YDR484W INO2P26798 304 aa1.61□□□□□ -2.15
VPS52YDR484W ZRT1P32804 376 aa1.61□□□□□ -2.15
VPS52YDR484W ASP1P38986 381 aaPredicted RBP1.61□□□□□ -2.15
VPS52YDR484W END3P39013 349 aa1.61□□□□□ -2.15
VPS52YDR484W SSO2P39926 295 aa1.61□□□□□ -2.15
VPS52YDR484W CAB5Q03941 241 aa1.61□□□□□ -2.15
VPS52YDR484W SNX41Q04053 625 aa1.61□□□□□ -2.15
VPS52YDR484W YLR297WQ05899 129 aa1.61□□□□□ -2.15
VPS52YDR484W SAM4Q08985 325 aaKnown RBP1.61□□□□□ -2.15
VPS52YDR484W UTP23Q12339 254 aaKnown RBP1.61□□□□□ -2.15
VPS52YDR484W CBP2P03874 630 aaPredicted RBP1.6□□□□□ -2.15
VPS52YDR484W HPR1P17629 752 aaKnown RBP1.6□□□□□ -2.15
VPS52YDR484W CSE1P33307 960 aa1.6□□□□□ -2.15
VPS52YDR484W PET8P38921 284 aa1.6□□□□□ -2.15
VPS52YDR484W SOP4P39543 234 aaPredicted RBP1.6□□□□□ -2.15
VPS52YDR484W PES4P39684 611 aa1.6□□□□□ -2.15
VPS52YDR484W SPO73P40031 143 aa1.6□□□□□ -2.15
VPS52YDR484W AIM20P40451 204 aa1.6□□□□□ -2.15
VPS52YDR484W YFL040WP43562 540 aa1.6□□□□□ -2.15
VPS52YDR484W RPN14P53196 417 aa1.6□□□□□ -2.15
VPS52YDR484W YPL080CQ02826 108 aa1.6□□□□□ -2.15
VPS52YDR484W VPS20Q04272 221 aa1.6□□□□□ -2.15
VPS52YDR484W CSI1Q04368 295 aa1.6□□□□□ -2.15
VPS52YDR484W ERP3Q12403 225 aa1.6□□□□□ -2.15
VPS52YDR484W YPR096CO13587 100 aa1.6□□□□□ -2.15
VPS52YDR484W MSS116P15424 664 aaKnown RBP1.6□□□□□ -2.15
VPS52YDR484W IFM1P25038 676 aa1.6□□□□□ -2.15
VPS52YDR484W KRR1P25586 316 aaPredicted RBP1.6□□□□□ -2.15
VPS52YDR484W VPH2P32341 215 aa1.6□□□□□ -2.15
VPS52YDR484W SUR1P33300 382 aa1.6□□□□□ -2.15
VPS52YDR484W SWC5P38326 303 aa1.6□□□□□ -2.15
VPS52YDR484W EDC2P40023 145 aaPredicted RBP1.6□□□□□ -2.15
VPS52YDR484W OKP1P53298 406 aa1.6□□□□□ -2.15
VPS52YDR484W RTC5Q12108 567 aaKnown RBP1.6□□□□□ -2.15
VPS52YDR484W YPR1Q12458 312 aa1.6□□□□□ -2.15
VPS52YDR484W LAG2Q92325 660 aa1.6□□□□□ -2.15
VPS52YDR484W STF1P01098 86 aa1.59□□□□□ -2.15
VPS52YDR484W YKL162CP36052 402 aa1.59□□□□□ -2.15
VPS52YDR484W AIM29P36154 155 aa1.59□□□□□ -2.15
VPS52YDR484W ECM14P38836 430 aa1.59□□□□□ -2.15
VPS52YDR484W BUD13P46947 266 aaPredicted RBP1.59□□□□□ -2.15
VPS52YDR484W YOR292CQ08743 309 aa1.59□□□□□ -2.15
VPS52YDR484W YPL264CQ08980 353 aa1.59□□□□□ -2.15
VPS52YDR484W YPR063CQ12160 140 aa1.59□□□□□ -2.15
VPS52YDR484W PAA1Q12447 191 aaKnown RBP1.59□□□□□ -2.15
VPS52YDR484W IZH4Q99393 312 aa1.59□□□□□ -2.15
VPS52YDR484W TDH3P00359 332 aaKnown RBP RIP-Chip data1.58□□□□□ -2.16not detected
VPS52YDR484W MRPL6P32904 214 aa1.58□□□□□ -2.16
VPS52YDR484W MCH2P36032 473 aa1.58□□□□□ -2.16
VPS52YDR484W YDR089WP38966 869 aa1.58□□□□□ -2.16
VPS52YDR484W LOH1P47055 219 aa1.58□□□□□ -2.16
VPS52YDR484W SWC4P53201 476 aa1.58□□□□□ -2.16
VPS52YDR484W YGR266WP53326 701 aa1.58□□□□□ -2.16
VPS52YDR484W DIA1P54005 336 aa1.58□□□□□ -2.16
VPS52YDR484W SEC13Q04491 297 aaKnown RBP1.58□□□□□ -2.16
VPS52YDR484W ARC18Q05933 178 aaKnown RBP1.58□□□□□ -2.16
VPS52YDR484W SGT2Q12118 346 aaKnown RBP1.58□□□□□ -2.16
VPS52YDR484W DCP1Q12517 231 aaPredicted RBP1.58□□□□□ -2.16
VPS52YDR484W RPS23AP0CX29 145 aaKnown RBP1.58□□□□□ -2.16
VPS52YDR484W RPS23BP0CX30 145 aa1.58□□□□□ -2.16
VPS52YDR484W GCD2P12754 651 aaPredicted RBP1.58□□□□□ -2.16
VPS52YDR484W SAR1P20606 190 aaKnown RBP1.58□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 68.3 ms