RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C ECM19Q06011 112 aa1.59□□□□□ -2.16
ASM4YDL088C PEX27Q08580 376 aa1.59□□□□□ -2.16
ASM4YDL088C MAS1P10507 462 aa1.58□□□□□ -2.16
ASM4YDL088C MSS116P15424 664 aaKnown RBP1.58□□□□□ -2.16
ASM4YDL088C ATG12P38316 186 aa1.58□□□□□ -2.16
ASM4YDL088C RCK1P38622 512 aa1.58□□□□□ -2.16
ASM4YDL088C PEX18P38855 283 aa1.58□□□□□ -2.16
ASM4YDL088C SMC2P38989 1170 aaKnown RBP1.58□□□□□ -2.16
ASM4YDL088C LCP5P40079 357 aaPredicted RBP1.58□□□□□ -2.16
ASM4YDL088C LOH1P47055 219 aa1.58□□□□□ -2.16
ASM4YDL088C RET3P53600 189 aa1.58□□□□□ -2.16
ASM4YDL088C YPL080CQ02826 108 aa1.58□□□□□ -2.16
ASM4YDL088C CSI1Q04368 295 aa1.58□□□□□ -2.16
ASM4YDL088C YMR310CQ04867 317 aaPredicted RBP1.58□□□□□ -2.16
ASM4YDL088C PFK27Q12471 397 aaPredicted RBP1.58□□□□□ -2.16
ASM4YDL088C DFM1Q12743 341 aaKnown RBP1.58□□□□□ -2.16
ASM4YDL088C STE3P06783 470 aa1.57□□□□□ -2.16
ASM4YDL088C MET2P08465 486 aa1.57□□□□□ -2.16
ASM4YDL088C DBR1P24309 405 aaKnown RBP1.57□□□□□ -2.16
ASM4YDL088C RPB9P27999 122 aa1.57□□□□□ -2.16
ASM4YDL088C MKK1P32490 508 aa1.57□□□□□ -2.16
ASM4YDL088C YMR134WP40207 237 aa1.57□□□□□ -2.16
ASM4YDL088C CDC40P40968 455 aaPredicted RBP1.57□□□□□ -2.16
ASM4YDL088C MIC19P43594 170 aa1.57□□□□□ -2.16
ASM4YDL088C FMP48P53233 369 aa1.57□□□□□ -2.16
ASM4YDL088C LST7P53237 242 aa1.57□□□□□ -2.16
ASM4YDL088C VOA1P53262 265 aa1.57□□□□□ -2.16
ASM4YDL088C TIM11P81449 96 aaPredicted RBP1.57□□□□□ -2.16
ASM4YDL088C RRN5Q02983 363 aa1.57□□□□□ -2.16
ASM4YDL088C SPO19Q03029 223 aa1.57□□□□□ -2.16
ASM4YDL088C RRG8Q06109 277 aa1.57□□□□□ -2.16
ASM4YDL088C YLR413WQ06689 675 aa1.57□□□□□ -2.16
ASM4YDL088C RPN8Q08723 338 aaKnown RBP1.57□□□□□ -2.16
ASM4YDL088C GAL7P08431 366 aa1.56□□□□□ -2.16
ASM4YDL088C GAL3P13045 520 aa1.56□□□□□ -2.16
ASM4YDL088C SNF6P18888 332 aa1.56□□□□□ -2.16
ASM4YDL088C SAR1P20606 190 aaKnown RBP1.56□□□□□ -2.16
ASM4YDL088C SAG1P20840 650 aa1.56□□□□□ -2.16
ASM4YDL088C YPS1P32329 569 aa1.56□□□□□ -2.16
ASM4YDL088C HSH155P49955 971 aaKnown RBP1.56□□□□□ -2.16
ASM4YDL088C NUP84P52891 726 aa1.56□□□□□ -2.16
ASM4YDL088C YGL114WP53134 725 aa1.56□□□□□ -2.16
ASM4YDL088C YNL146WP53906 100 aa1.56□□□□□ -2.16
ASM4YDL088C AIM33Q04516 312 aa1.56□□□□□ -2.16
ASM4YDL088C ERV41Q04651 352 aa1.56□□□□□ -2.16
ASM4YDL088C GTO3Q04806 366 aa1.56□□□□□ -2.16
ASM4YDL088C KAP95Q06142 861 aaKnown RBP1.56□□□□□ -2.16
ASM4YDL088C VAC14Q06708 880 aa1.56□□□□□ -2.16
ASM4YDL088C CLP1Q08685 445 aaPredicted RBP1.56□□□□□ -2.16
ASM4YDL088C YDR262WQ12331 272 aa1.56□□□□□ -2.16
ASM4YDL088C FSH3Q99369 266 aa1.56□□□□□ -2.16
ASM4YDL088C FAR1P21268 830 aa1.55□□□□□ -2.16
ASM4YDL088C DAL81P21657 970 aa1.55□□□□□ -2.16
ASM4YDL088C HXT2P23585 541 aa1.55□□□□□ -2.16
ASM4YDL088C INO2P26798 304 aa1.55□□□□□ -2.16
ASM4YDL088C YBL081WP38180 368 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C RFT1P38206 574 aaPredicted RBP1.55□□□□□ -2.16
ASM4YDL088C SWC5P38326 303 aa1.55□□□□□ -2.16
ASM4YDL088C PRP39P39682 629 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C RRG9P40156 214 aa1.55□□□□□ -2.16
ASM4YDL088C YHC3P47040 408 aa1.55□□□□□ -2.16
ASM4YDL088C YGL118CP53132 145 aa1.55□□□□□ -2.16
ASM4YDL088C YDR222WQ04925 415 aa1.55□□□□□ -2.16
ASM4YDL088C STE23Q06010 1027 aa1.55□□□□□ -2.16
ASM4YDL088C CUR1Q06469 252 aa1.55□□□□□ -2.16
ASM4YDL088C DIB1Q06819 143 aaPredicted RBP1.55□□□□□ -2.16
ASM4YDL088C RUD3Q12234 484 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C RGS2Q99188 309 aa1.55□□□□□ -2.16
ASM4YDL088C MHP1P43638 1398 aa1.55□□□□□ -2.16
ASM4YDL088C SSA3P09435 649 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C UGA1P17649 471 aa1.55□□□□□ -2.16
ASM4YDL088C YUH1P35127 236 aa1.55□□□□□ -2.16
ASM4YDL088C IST2P38250 946 aa1.55□□□□□ -2.16
ASM4YDL088C PEX32P38292 413 aa1.55□□□□□ -2.16
ASM4YDL088C END3P39013 349 aa1.55□□□□□ -2.16
ASM4YDL088C AIM20P40451 204 aa1.55□□□□□ -2.16
ASM4YDL088C ECO1P43605 281 aa1.55□□□□□ -2.16
ASM4YDL088C GCD14P46959 383 aaPredicted RBP1.55□□□□□ -2.16
ASM4YDL088C EMC2P47133 292 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C GTO1P48239 356 aa1.55□□□□□ -2.16
ASM4YDL088C RIB4P50861 169 aaPredicted RBP1.55□□□□□ -2.16
ASM4YDL088C MPP6P53725 186 aaPredicted RBP1.55□□□□□ -2.16
ASM4YDL088C DBP6P53734 629 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C ABZ2Q03266 374 aa1.55□□□□□ -2.16
ASM4YDL088C CAB5Q03941 241 aa1.55□□□□□ -2.16
ASM4YDL088C UBX2Q04228 584 aa1.55□□□□□ -2.16
ASM4YDL088C ECM18Q04623 453 aa1.55□□□□□ -2.16
ASM4YDL088C RNH1Q04740 348 aa1.55□□□□□ -2.16
ASM4YDL088C TAF10Q12030 206 aa1.55□□□□□ -2.16
ASM4YDL088C GLE1Q12315 538 aa1.55□□□□□ -2.16
ASM4YDL088C AIM45Q12480 344 aaKnown RBP1.55□□□□□ -2.16
ASM4YDL088C DCP1Q12517 231 aaPredicted RBP1.55□□□□□ -2.16
ASM4YDL088C YLL053CP0CD98 152 aa1.54□□□□□ -2.16
ASM4YDL088C CTA1P15202 515 aa1.54□□□□□ -2.16
ASM4YDL088C MRPL20P22354 195 aaPredicted RBP1.54□□□□□ -2.16
ASM4YDL088C RPL5P26321 297 aaKnown RBP1.54□□□□□ -2.16
ASM4YDL088C COY1P34237 679 aa1.54□□□□□ -2.16
ASM4YDL088C RPC25P35718 212 aa1.54□□□□□ -2.16
ASM4YDL088C ATG7P38862 630 aa1.54□□□□□ -2.16
ASM4YDL088C ALP1P38971 573 aa1.54□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms