RNA–Protein interactions for RNA: YBR221C

PDB1, Transcript of E1 beta subunit of the pyruvate dehydrogenase (PDH) complex, yeastyeast

Gene PDB1, Length 1,101 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDB1YBR221C JLP1Q12358 412 aa5.17□□□□□ -1.58
PDB1YBR221C ASP3-2P0CX77 362 aa5.16□□□□□ -1.58
PDB1YBR221C ASP3-3P0CX78 362 aa5.16□□□□□ -1.58
PDB1YBR221C ASP3-4P0CX79 362 aa5.16□□□□□ -1.58
PDB1YBR221C ASP3-1P0CZ17 362 aa5.16□□□□□ -1.58
PDB1YBR221C ZWF1P11412 505 aaKnown RBP5.16□□□□□ -1.58
PDB1YBR221C DPM1P14020 267 aaKnown RBP5.16□□□□□ -1.58
PDB1YBR221C AIM17P23180 465 aaKnown RBP5.16□□□□□ -1.58
PDB1YBR221C MXR2P25566 168 aa5.16□□□□□ -1.58
PDB1YBR221C CDC20P26309 610 aa5.16□□□□□ -1.58
PDB1YBR221C CNE1P27825 502 aa5.16□□□□□ -1.58
PDB1YBR221C YKL097CP34245 136 aa5.16□□□□□ -1.58
PDB1YBR221C SWD2P36104 329 aaPredicted RBP5.16□□□□□ -1.58
PDB1YBR221C PRS2P38620 318 aaKnown RBP5.16□□□□□ -1.58
PDB1YBR221C STP2P38704 541 aa5.16□□□□□ -1.58
PDB1YBR221C TDA11P38854 504 aa5.16□□□□□ -1.58
PDB1YBR221C FMP52P40008 231 aa5.16□□□□□ -1.58
PDB1YBR221C PHM8P40025 321 aa5.16□□□□□ -1.58
PDB1YBR221C POP1P41812 875 aa5.16□□□□□ -1.58
PDB1YBR221C QRI1P43123 477 aaKnown RBP5.16□□□□□ -1.58
PDB1YBR221C YJR011CP47086 261 aaPredicted RBP5.16□□□□□ -1.58
PDB1YBR221C YJR111CP47148 283 aaKnown RBP5.16□□□□□ -1.58
PDB1YBR221C MGA1P53050 456 aa5.16□□□□□ -1.58
PDB1YBR221C BUD17P53727 317 aa5.16□□□□□ -1.58
PDB1YBR221C IBD2P53892 351 aa5.16□□□□□ -1.58
PDB1YBR221C SNO1Q03144 224 aa5.16□□□□□ -1.58
PDB1YBR221C YDR209CQ03480 137 aa5.16□□□□□ -1.58
PDB1YBR221C NUP53Q03790 475 aa5.16□□□□□ -1.58
PDB1YBR221C DYN3Q04949 312 aa5.16□□□□□ -1.58
PDB1YBR221C YPR127WQ06494 345 aa5.16□□□□□ -1.58
PDB1YBR221C ASR1Q06834 288 aa5.16□□□□□ -1.58
PDB1YBR221C YOR387CQ08910 206 aa5.16□□□□□ -1.58
PDB1YBR221C YPQ1Q12010 308 aa5.16□□□□□ -1.58
PDB1YBR221C YOR114WQ12219 294 aa5.16□□□□□ -1.58
PDB1YBR221C SET6Q12529 373 aa5.16□□□□□ -1.58
PDB1YBR221C RPL12AP0CX53 165 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C RPL12BP0CX54 165 aa5.15□□□□□ -1.59
PDB1YBR221C PET54P10834 293 aa5.15□□□□□ -1.59
PDB1YBR221C SLM5P25345 492 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C HCM1P25364 564 aa5.15□□□□□ -1.59
PDB1YBR221C CDC5P32562 705 aa5.15□□□□□ -1.59
PDB1YBR221C STE14P32584 239 aa5.15□□□□□ -1.59
PDB1YBR221C TIP20P33891 701 aa5.15□□□□□ -1.59
PDB1YBR221C SHE3P38272 425 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C YHL026CP38740 315 aa5.15□□□□□ -1.59
PDB1YBR221C BDH1P39714 382 aa5.15□□□□□ -1.59
PDB1YBR221C YER079WP40052 210 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C PRE6P40303 254 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C LAS21P40367 830 aa5.15□□□□□ -1.59
PDB1YBR221C BMT5P40493 336 aa5.15□□□□□ -1.59
PDB1YBR221C YGR201CP42936 225 aa5.15□□□□□ -1.59
PDB1YBR221C YGR210CP42942 411 aa5.15□□□□□ -1.59
PDB1YBR221C YFR020WP43600 232 aa5.15□□□□□ -1.59
PDB1YBR221C TRS85P46944 698 aa5.15□□□□□ -1.59
PDB1YBR221C YJR030CP47101 745 aa5.15□□□□□ -1.59
PDB1YBR221C ADO1P47143 340 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C MIC26P50087 233 aa5.15□□□□□ -1.59
PDB1YBR221C VEL1P53058 206 aa5.15□□□□□ -1.59
PDB1YBR221C MKC7P53379 596 aa5.15□□□□□ -1.59
PDB1YBR221C YPR003CP53394 754 aa5.15□□□□□ -1.59
PDB1YBR221C YNR066CP53752 436 aa5.15□□□□□ -1.59
PDB1YBR221C KTR5P53966 522 aaPredicted RBP5.15□□□□□ -1.59
PDB1YBR221C TRM82Q03774 444 aa5.15□□□□□ -1.59
PDB1YBR221C PRM6Q04705 352 aa5.15□□□□□ -1.59
PDB1YBR221C WHI4Q07655 649 aaKnown RBP5.15□□□□□ -1.59
PDB1YBR221C RRP42Q12277 265 aaPredicted RBP5.15□□□□□ -1.59
PDB1YBR221C BBP1Q12365 385 aa5.15□□□□□ -1.59
PDB1YBR221C RKM5Q12367 367 aa5.15□□□□□ -1.59
PDB1YBR221C RPN6Q12377 434 aa5.15□□□□□ -1.59
PDB1YBR221C GAL10P04397 699 aa5.14□□□□□ -1.59
PDB1YBR221C DST1P07273 309 aa5.14□□□□□ -1.59
PDB1YBR221C TRP4P07285 380 aaPredicted RBP5.14□□□□□ -1.59
PDB1YBR221C SSC1P0CS90 654 aaKnown RBP5.14□□□□□ -1.59
PDB1YBR221C COS2P0CX12 379 aa5.14□□□□□ -1.59
PDB1YBR221C COS3P0CX13 379 aa5.14□□□□□ -1.59
PDB1YBR221C DBF2P22204 572 aa5.14□□□□□ -1.59
PDB1YBR221C AMD2P22580 549 aa5.14□□□□□ -1.59
PDB1YBR221C AAT2P23542 418 aaKnown RBP5.14□□□□□ -1.59
PDB1YBR221C LAC1P28496 418 aa5.14□□□□□ -1.59
PDB1YBR221C EHD3P28817 500 aa5.14□□□□□ -1.59
PDB1YBR221C MDH3P32419 343 aaKnown RBP RIP-Chip data5.14□□□□□ -1.59not detected
PDB1YBR221C AIM3P38266 947 aaKnown RBP5.14□□□□□ -1.59
PDB1YBR221C DBP8P38719 431 aa5.14□□□□□ -1.59
PDB1YBR221C CSM2P40465 213 aa5.14□□□□□ -1.59
PDB1YBR221C TAD2P47058 250 aa5.14□□□□□ -1.59
PDB1YBR221C GTR2P53290 341 aa5.14□□□□□ -1.59
PDB1YBR221C OKP1P53298 406 aa5.14□□□□□ -1.59
PDB1YBR221C NUP49Q02199 472 aa5.14□□□□□ -1.59
PDB1YBR221C NAT4Q04751 285 aa5.14□□□□□ -1.59
PDB1YBR221C RAD34Q06665 692 aa5.14□□□□□ -1.59
PDB1YBR221C MFG1Q07684 458 aa5.14□□□□□ -1.59
PDB1YBR221C RIB2Q12362 591 aaKnown RBP5.14□□□□□ -1.59
PDB1YBR221C DCN1Q12395 269 aa5.14□□□□□ -1.59
PDB1YBR221C Q0144Q9ZZW2 109 aa5.14□□□□□ -1.59
PDB1YBR221C CDC8P00572 216 aa5.13□□□□□ -1.59
PDB1YBR221C RPL28P02406 149 aaKnown RBP5.13□□□□□ -1.59
PDB1YBR221C OPI3P05375 206 aa5.13□□□□□ -1.59
PDB1YBR221C CHO1P08456 276 aa5.13□□□□□ -1.59
PDB1YBR221C GCY1P14065 312 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
PDB1YBR221C ACB1P31787 87 aa5.13□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 19.5 ms