RNA–Protein interactions for RNA: snR56

snR56, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR56, Length 88 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR56snR56 YDR541CQ03049 344 aa0.74□□□□□ -2.29
snR56snR56 RDS3Q06835 107 aaPredicted RBP0.74□□□□□ -2.29
snR56snR56 TY3A-GQ12173 290 aa0.74□□□□□ -2.29
snR56snR56 TY3A-IQ99219 290 aa0.74□□□□□ -2.29
snR56snR56 YOL163WP0CF20 169 aa0.73□□□□□ -2.29
snR56snR56 DAP2P18962 818 aa0.73□□□□□ -2.29
snR56snR56 VAM7P32912 316 aa0.73□□□□□ -2.29
snR56snR56 AQR1P53943 586 aa0.73□□□□□ -2.29
snR56snR56 RRB1Q04225 511 aaKnown RBP0.73□□□□□ -2.29
snR56snR56 ERB1Q04660 807 aaKnown RBP0.73□□□□□ -2.29
snR56snR56 YOR012WQ12351 137 aa0.73□□□□□ -2.29
snR56snR56 TRM10Q12400 293 aa0.73□□□□□ -2.29
snR56snR56 PDE2P06776 526 aa0.72□□□□□ -2.29
snR56snR56 CDC42P19073 191 aa0.72□□□□□ -2.29
snR56snR56 PRE7P23724 241 aaKnown RBP0.72□□□□□ -2.29
snR56snR56 CSE1P33307 960 aa0.72□□□□□ -2.29
snR56snR56 PCH2P38126 564 aa0.72□□□□□ -2.29
snR56snR56 DSE1P40077 573 aa0.72□□□□□ -2.29
snR56snR56 YMR166CQ03829 368 aa0.72□□□□□ -2.29
snR56snR56 YLR287CQ05881 355 aa0.72□□□□□ -2.29
snR56snR56 TIM22Q12328 207 aa0.72□□□□□ -2.29
snR56snR56 SCO1P23833 295 aa0.71□□□□□ -2.3
snR56snR56 EPL1P43572 832 aa0.71□□□□□ -2.3
snR56snR56 MIG2P53035 382 aa0.71□□□□□ -2.3
snR56snR56 YKL187CP34231 750 aa0.7□□□□□ -2.3
snR56snR56 MNL1P38888 796 aa0.7□□□□□ -2.3
snR56snR56 SDS23P53172 527 aa0.7□□□□□ -2.3
snR56snR56 TPC1P53257 314 aa0.7□□□□□ -2.3
snR56snR56 MEH1Q02205 184 aa0.7□□□□□ -2.3
snR56snR56 SPP381P38282 291 aaPredicted RBP0.69□□□□□ -2.3
snR56snR56 NDE1P40215 560 aa0.69□□□□□ -2.3
snR56snR56 PIR5P46999 287 aa0.69□□□□□ -2.3
snR56snR56 LSG1P53145 640 aaKnown RBP0.69□□□□□ -2.3
snR56snR56 RPL26AP05743 127 aaKnown RBP0.68□□□□□ -2.3
snR56snR56 YAK1P14680 807 aa0.68□□□□□ -2.3
snR56snR56 LSM4P40070 187 aaKnown RBP0.68□□□□□ -2.3
snR56snR56 YJR146WP47174 117 aa0.68□□□□□ -2.3
snR56snR56 UFD1P53044 361 aa0.68□□□□□ -2.3
snR56snR56 RPL26BP53221 127 aaKnown RBP0.68□□□□□ -2.3
snR56snR56 YGR111WP53265 400 aa0.68□□□□□ -2.3
snR56snR56 MDM1Q01846 1127 aa0.68□□□□□ -2.3
snR56snR56 YOL075CQ08234 1294 aa0.68□□□□□ -2.3
snR56snR56 ERP3Q12403 225 aa0.68□□□□□ -2.3
snR56snR56 KAP104P38217 918 aaKnown RBP0.67□□□□□ -2.3
snR56snR56 LCB2P40970 561 aa0.67□□□□□ -2.3
snR56snR56 YNL320WP42840 284 aa0.67□□□□□ -2.3
snR56snR56 YJL027CP47063 138 aaPredicted RBP0.67□□□□□ -2.3
snR56snR56 RPN6Q12377 434 aa0.67□□□□□ -2.3
snR56snR56 SRP72P38688 640 aaKnown RBP0.66□□□□□ -2.3
snR56snR56 LYS12P40495 371 aaKnown RBP0.66□□□□□ -2.3
snR56snR56 SUE1Q06524 206 aa0.66□□□□□ -2.3
snR56snR56 IPK1Q06667 281 aa0.66□□□□□ -2.3
snR56snR56 PMT4P46971 762 aa0.65□□□□□ -2.31
snR56snR56 LST7P53237 242 aa0.65□□□□□ -2.31
snR56snR56 TSR2Q06672 205 aaKnown RBP0.65□□□□□ -2.31
snR56snR56 SCM3Q12334 223 aa0.65□□□□□ -2.31
snR56snR56 MHP1P43638 1398 aa0.65□□□□□ -2.31
snR56snR56 EFB1P32471 206 aaKnown RBP0.64□□□□□ -2.31
snR56snR56 SPH1Q06160 661 aa0.64□□□□□ -2.31
snR56snR56 HIS3P06633 220 aa0.63□□□□□ -2.31
snR56snR56 EDC2P40023 145 aaPredicted RBP0.63□□□□□ -2.31
snR56snR56 ZIM17P42844 174 aa0.63□□□□□ -2.31
snR56snR56 RET3P53600 189 aa0.63□□□□□ -2.31
snR56snR56 MIM1Q08176 113 aa0.63□□□□□ -2.31
snR56snR56 DCI1Q08558 271 aa0.63□□□□□ -2.31
snR56snR56 DCP1Q12517 231 aaPredicted RBP0.63□□□□□ -2.31
snR56snR56 ATG7P38862 630 aa0.62□□□□□ -2.31
snR56snR56 LTV1P34078 463 aa0.61□□□□□ -2.31
snR56snR56 YPR078CQ06813 372 aa0.61□□□□□ -2.31
snR56snR56 RRG1Q12167 365 aaPredicted RBP0.61□□□□□ -2.31
snR56snR56 RPN5Q12250 445 aaKnown RBP0.61□□□□□ -2.31
snR56snR56 PRR2Q12310 699 aa0.61□□□□□ -2.31
snR56snR56 RRT12P25381 491 aa0.6□□□□□ -2.31
snR56snR56 GRE3P38715 327 aaKnown RBP RIP-Chip data0.6□□□□□ -2.31not detected
snR56snR56 LCP5P40079 357 aaPredicted RBP0.6□□□□□ -2.31
snR56snR56 EBS1Q03466 884 aaKnown RBP0.6□□□□□ -2.31
snR56snR56 ISA2Q12425 185 aa0.6□□□□□ -2.31
snR56snR56 YHL044WP38727 235 aa0.59□□□□□ -2.31
snR56snR56 CBP2P03874 630 aaPredicted RBP0.58□□□□□ -2.32
snR56snR56 YJR141WP47172 347 aaPredicted RBP0.58□□□□□ -2.32
snR56snR56 CSM3Q04659 317 aa0.58□□□□□ -2.32
snR56snR56 RTC5Q12108 567 aaKnown RBP0.58□□□□□ -2.32
snR56snR56 YPL150WQ12152 901 aa0.58□□□□□ -2.32
snR56snR56 RPS16AP0CX51 143 aaKnown RBP0.57□□□□□ -2.32
snR56snR56 RPS16BP0CX52 143 aaKnown RBP0.57□□□□□ -2.32
snR56snR56 MDH1P17505 334 aaKnown RBP RIP-Chip data0.57□□□□□ -2.32not detected
snR56snR56 DBR1P24309 405 aaKnown RBP0.57□□□□□ -2.32
snR56snR56 OSH6Q02201 448 aa0.57□□□□□ -2.32
snR56snR56 INM2Q05533 292 aa0.57□□□□□ -2.32
snR56snR56 PFK27Q12471 397 aaPredicted RBP0.57□□□□□ -2.32
snR56snR56 CDC31P06704 161 aaKnown RBP0.56□□□□□ -2.32
snR56snR56 ZWF1P11412 505 aaKnown RBP0.56□□□□□ -2.32
snR56snR56 MSK1P32048 576 aa0.56□□□□□ -2.32
snR56snR56 MRPS5P33759 307 aa0.56□□□□□ -2.32
snR56snR56 MPE1P35728 441 aaKnown RBP0.56□□□□□ -2.32
snR56snR56 FUR1P18562 216 aaKnown RBP0.55□□□□□ -2.32
snR56snR56 VPS1P21576 704 aaKnown RBP0.55□□□□□ -2.32
snR56snR56 SPO77Q06134 477 aa0.55□□□□□ -2.32
snR56snR56 SRN2Q99176 213 aa0.55□□□□□ -2.32
snR56snR56 DPM1P14020 267 aaKnown RBP0.54□□□□□ -2.32
Retrieved 100 of 5,963 RNA–protein pairs in 85 ms