RNA–Protein interactions for RNA: YPR103W

PRE2, Transcript of Beta 5 subunit of the 20S proteasome, yeastyeast

Gene PRE2, Length 864 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE2YPR103W RPL21BQ12672 160 aaKnown RBP4.38□□□□□ -1.71
PRE2YPR103W YCF1P39109 1515 aaKnown RBP4.37□□□□□ -1.71
PRE2YPR103W MSS116P15424 664 aaKnown RBP4.37□□□□□ -1.71
PRE2YPR103W VMA5P31412 392 aaKnown RBP4.37□□□□□ -1.71
PRE2YPR103W ECT1P33412 323 aa4.37□□□□□ -1.71
PRE2YPR103W BMT2P38278 337 aa4.37□□□□□ -1.71
PRE2YPR103W CHL4P38907 458 aa4.37□□□□□ -1.71
PRE2YPR103W YFR018CP43599 363 aa4.37□□□□□ -1.71
PRE2YPR103W RMI1Q02685 241 aa4.37□□□□□ -1.71
PRE2YPR103W RVB1Q03940 463 aaKnown RBP4.37□□□□□ -1.71
PRE2YPR103W GCD2P12754 651 aaPredicted RBP4.36□□□□□ -1.71
PRE2YPR103W DTR1P38125 572 aa4.36□□□□□ -1.71
PRE2YPR103W MRP21P38175 177 aa4.36□□□□□ -1.71
PRE2YPR103W MNN9P39107 395 aaKnown RBP4.36□□□□□ -1.71
PRE2YPR103W PEX22P39718 180 aa4.36□□□□□ -1.71
PRE2YPR103W YFL040WP43562 540 aa4.36□□□□□ -1.71
PRE2YPR103W YGL262WP53054 175 aa4.36□□□□□ -1.71
PRE2YPR103W RNH201P53942 307 aa4.36□□□□□ -1.71
PRE2YPR103W FOL3Q12676 427 aaPredicted RBP4.36□□□□□ -1.71
PRE2YPR103W REP1P03871 373 aa4.35□□□□□ -1.71
PRE2YPR103W CBP6P07253 162 aaPredicted RBP4.35□□□□□ -1.71
PRE2YPR103W SMP1P38128 452 aa4.35□□□□□ -1.71
PRE2YPR103W FET3P38993 636 aa4.35□□□□□ -1.71
PRE2YPR103W INA22P40576 216 aa4.35□□□□□ -1.71
PRE2YPR103W STB1P42845 420 aa4.35□□□□□ -1.71
PRE2YPR103W TPC1P53257 314 aa4.35□□□□□ -1.71
PRE2YPR103W UTP25P40498 721 aaKnown RBP4.34□□□□□ -1.71
PRE2YPR103W LOC1P43586 204 aaPredicted RBP4.34□□□□□ -1.71
PRE2YPR103W TPS1Q00764 495 aaKnown RBP4.34□□□□□ -1.71
PRE2YPR103W RPL21AQ02753 160 aaKnown RBP4.34□□□□□ -1.71
PRE2YPR103W MRX11Q03079 207 aa4.34□□□□□ -1.71
PRE2YPR103W YMR111CQ04461 462 aaPredicted RBP4.34□□□□□ -1.71
PRE2YPR103W FAR10Q06001 478 aa4.34□□□□□ -1.71
PRE2YPR103W SRO7Q12038 1033 aa4.34□□□□□ -1.71
PRE2YPR103W PSK1P31374 1356 aa4.34□□□□□ -1.71
PRE2YPR103W SSK2P53599 1579 aa4.33□□□□□ -1.72
PRE2YPR103W SPS100P13130 326 aa4.33□□□□□ -1.72
PRE2YPR103W DBP3P20447 523 aaKnown RBP4.33□□□□□ -1.72
PRE2YPR103W RBK1P25332 333 aa4.33□□□□□ -1.72
PRE2YPR103W ACB1P31787 87 aa4.33□□□□□ -1.72
PRE2YPR103W CDC40P40968 455 aaPredicted RBP4.33□□□□□ -1.72
PRE2YPR103W URA10P30402 227 aa4.32□□□□□ -1.72
PRE2YPR103W SHE3P38272 425 aaKnown RBP4.32□□□□□ -1.72
PRE2YPR103W SEO1P39709 593 aa4.32□□□□□ -1.72
PRE2YPR103W MKC7P53379 596 aa4.32□□□□□ -1.72
PRE2YPR103W HCH1P53834 153 aa4.32□□□□□ -1.72
PRE2YPR103W APC2Q12440 853 aa4.32□□□□□ -1.72
PRE2YPR103W YOL085CQ99345 113 aa4.32□□□□□ -1.72
PRE2YPR103W TAF2P23255 1407 aa4.31□□□□□ -1.72
PRE2YPR103W CAR2P07991 424 aaKnown RBP4.31□□□□□ -1.72
PRE2YPR103W ECM18Q04623 453 aa4.31□□□□□ -1.72
PRE2YPR103W VAC14Q06708 880 aa4.31□□□□□ -1.72
PRE2YPR103W YLR012CQ07927 99 aa4.31□□□□□ -1.72
PRE2YPR103W BSC6Q08280 497 aa4.31□□□□□ -1.72
PRE2YPR103W RDL2Q08742 149 aaKnown RBP4.31□□□□□ -1.72
PRE2YPR103W PCL7P40186 285 aa4.3□□□□□ -1.72
PRE2YPR103W PMT4P46971 762 aa4.3□□□□□ -1.72
PRE2YPR103W OKP1P53298 406 aa4.3□□□□□ -1.72
PRE2YPR103W PIN3Q06449 215 aa4.3□□□□□ -1.72
PRE2YPR103W RPN8Q08723 338 aaKnown RBP4.3□□□□□ -1.72
PRE2YPR103W RAX2Q12465 1220 aa4.3□□□□□ -1.72
PRE2YPR103W BGL2P15703 313 aaKnown RBP4.29□□□□□ -1.72
PRE2YPR103W MEI5P32489 222 aa4.29□□□□□ -1.72
PRE2YPR103W RAD23P32628 398 aaKnown RBP4.29□□□□□ -1.72
PRE2YPR103W MRPL40P36534 297 aa4.29□□□□□ -1.72
PRE2YPR103W RCK1P38622 512 aa4.29□□□□□ -1.72
PRE2YPR103W KTR6P54070 446 aa4.29□□□□□ -1.72
PRE2YPR103W ERV25P54837 211 aaKnown RBP4.29□□□□□ -1.72
PRE2YPR103W RRG8Q06109 277 aa4.29□□□□□ -1.72
PRE2YPR103W DCP1Q12517 231 aaPredicted RBP4.29□□□□□ -1.72
PRE2YPR103W LTE1P07866 1435 aa4.29□□□□□ -1.72
PRE2YPR103W SKI3P17883 1432 aaKnown RBP4.29□□□□□ -1.72
PRE2YPR103W MET5P47169 1442 aa4.29□□□□□ -1.72
PRE2YPR103W MYO2P19524 1574 aaKnown RBP4.28□□□□□ -1.72
PRE2YPR103W TPI1P00942 248 aaKnown RBP4.28□□□□□ -1.72
PRE2YPR103W ASP3-2P0CX77 362 aa4.28□□□□□ -1.72
PRE2YPR103W ASP3-3P0CX78 362 aa4.28□□□□□ -1.72
PRE2YPR103W ASP3-4P0CX79 362 aa4.28□□□□□ -1.72
PRE2YPR103W ASP3-1P0CZ17 362 aa4.28□□□□□ -1.72
PRE2YPR103W ITR2P30606 609 aa4.28□□□□□ -1.72
PRE2YPR103W DSE1P40077 573 aa4.28□□□□□ -1.72
PRE2YPR103W GCD14P46959 383 aaPredicted RBP4.28□□□□□ -1.72
PRE2YPR103W VEL1P53058 206 aa4.28□□□□□ -1.72
PRE2YPR103W YPL080CQ02826 108 aa4.28□□□□□ -1.72
PRE2YPR103W UBX2Q04228 584 aa4.28□□□□□ -1.72
PRE2YPR103W MIM1Q08176 113 aa4.28□□□□□ -1.72
PRE2YPR103W MMT2Q08970 484 aa4.28□□□□□ -1.72
PRE2YPR103W SAM4Q08985 325 aaKnown RBP4.28□□□□□ -1.72
PRE2YPR103W YDR018CQ12185 396 aa4.28□□□□□ -1.72
PRE2YPR103W TIR4Q12218 487 aaPredicted RBP4.28□□□□□ -1.72
PRE2YPR103W LDB17Q12342 491 aa4.28□□□□□ -1.72
PRE2YPR103W CBF5P33322 483 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PRE2YPR103W YKL071WP36086 256 aa4.27□□□□□ -1.73
PRE2YPR103W PET8P38921 284 aa4.27□□□□□ -1.73
PRE2YPR103W RRT13P40042 185 aa4.27□□□□□ -1.73
PRE2YPR103W VOA1P53262 265 aa4.27□□□□□ -1.73
PRE2YPR103W API2Q04413 109 aa4.27□□□□□ -1.73
PRE2YPR103W MRX9Q07349 420 aaKnown RBP4.27□□□□□ -1.73
PRE2YPR103W YPR1Q12458 312 aa4.27□□□□□ -1.73
PRE2YPR103W CTA1P15202 515 aa4.26□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 25.4 ms