RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	HEM14	P40012	539 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	YFL040W	P43562	540 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	COX16	P47081	118 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	SEH1	P53011	349 aa	Known RBP	1.44	□□□□□ -2.18
RLM1	YPL089C	BIO4	P53630	237 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	YNL050C	P53952	270 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	SUR7	P54003	302 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	RRN5	Q02983	363 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	YMR027W	Q04371	470 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	FSH2	Q05015	223 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	YLL007C	Q07799	665 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	RRT8	Q08219	342 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	TAF10	Q12030	206 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	ATP16	Q12165	160 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	HMS1	Q12398	434 aa		1.44	□□□□□ -2.18
RLM1	YPL089C	MIR1	P23641	311 aa	Known RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	LDS1	P31379	325 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	RPT5	P33297	434 aa	Known RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	SWD2	P36104	329 aa	Predicted RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	YHR035W	P38769	630 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	PET100	P38958	111 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	SMC2	P38989	1170 aa	Known RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	MIG3	P39943	394 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	AIM10	P39965	576 aa	Known RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	SCC4	P40090	624 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	YER186C	P40101	306 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	SLM1	P40485	686 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	MOB2	P43563	287 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	FMP33	P46998	180 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	AIM23	P47015	356 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	MPP6	P53725	186 aa	Predicted RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	YET2	Q04210	160 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	CSI1	Q04368	295 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	PAL1	Q05518	499 aa	Known RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	BSC6	Q08280	497 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	RRG7	Q08774	242 aa	Predicted RBP	1.43	□□□□□ -2.18
RLM1	YPL089C	YPQ1	Q12010	308 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	SFM1	Q12314	213 aa		1.43	□□□□□ -2.18
RLM1	YPL089C	TDH1	P00360	332 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	FRS2	P15625	503 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	ISY1	P21374	235 aa	Predicted RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	AAT2	P23542	418 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	SPR1	P32603	445 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	TPO5	P36029	618 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SWD3	P38123	315 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	BAT1	P38891	393 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	PEX22	P39718	180 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	KEL2	P50090	882 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	YGR266W	P53326	701 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	VAC7	P53950	1165 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	PRP38	Q00723	242 aa	Predicted RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	SLT2	Q00772	484 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SED5	Q01590	340 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SKI8	Q02793	397 aa	Predicted RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	YLR012C	Q07927	99 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	RDL2	Q08742	149 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	ERP3	Q12403	225 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	PRP46	Q12417	451 aa	Predicted RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	RPL24A	P04449	155 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	UNG1	P12887	359 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SPS100	P13130	326 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	CTA1	P15202	515 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	CDC50	P25656	391 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	URA10	P30402	227 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	COT1	P32798	439 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	KTI12	P34253	313 aa	Known RBP	1.42	□□□□□ -2.18
RLM1	YPL089C	YKL063C	P35725	167 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	COS9	P36034	407 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	CTM1	P38818	585 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	PFS1	P38872	237 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	RCY1	P39531	840 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	AGP3	P43548	558 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	PMT4	P46971	762 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SDT1	P53078	280 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	CDH1	P53197	566 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SPP2	Q02521	185 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	ATC1	Q04005	294 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	SNX41	Q04053	625 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	YLR177W	Q06251	628 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	APC9	Q12107	265 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	HRT3	Q12347	344 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	PRM4	Q12498	284 aa		1.42	□□□□□ -2.18
RLM1	YPL089C	ATP6	P00854	259 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	STE7	P06784	515 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	PRB1	P09232	635 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	RPL31A	P0C2H8	113 aa	Known RBP	1.41	□□□□□ -2.18
RLM1	YPL089C	ERD1	P16151	362 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	ZRC1	P20107	442 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	YSR3	P23501	404 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	RVS161	P25343	265 aa	Known RBP	1.41	□□□□□ -2.18
RLM1	YPL089C	NUP2	P32499	720 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	MCH2	P36032	473 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	OM14	P38325	134 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	TIM17	P39515	158 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	UTP18	P40362	594 aa	Predicted RBP	1.41	□□□□□ -2.18
RLM1	YPL089C	MRX5	P47007	382 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	YJR054W	P47114	497 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	YPL077C	Q02831	240 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	SCS7	Q03529	384 aa		1.41	□□□□□ -2.18
RLM1	YPL089C	FAR10	Q06001	478 aa		1.41	□□□□□ -2.18

Retrieved 100 of 5,963 RNA–protein pairs in 85.2 ms