RNA–Protein interactions for RNA: YPL016W

SWI1, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeastyeast

Gene SWI1, Length 3,945 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI1YPL016W CDC36P06100 191 aaPredicted RBP3.46□□□□□ -1.86
SWI1YPL016W PUT4P15380 627 aa3.46□□□□□ -1.86
SWI1YPL016W SPO16P17122 198 aa3.46□□□□□ -1.86
SWI1YPL016W UTR1P21373 530 aa3.46□□□□□ -1.86
SWI1YPL016W KKQ8P36004 724 aa3.46□□□□□ -1.86
SWI1YPL016W PRM2P40534 656 aa3.46□□□□□ -1.86
SWI1YPL016W GAB1P41733 394 aa3.46□□□□□ -1.86
SWI1YPL016W GLR1P41921 483 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W NRG1Q03125 231 aa3.46□□□□□ -1.86
SWI1YPL016W RBS1Q05672 457 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W ARP2P32381 391 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W AEP1P32493 518 aa3.46□□□□□ -1.86
SWI1YPL016W SHE3P38272 425 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W SHG1P38337 142 aa3.46□□□□□ -1.86
SWI1YPL016W BIT2P38346 545 aa3.46□□□□□ -1.86
SWI1YPL016W RAD55P38953 406 aa3.46□□□□□ -1.86
SWI1YPL016W YAL037WP39728 267 aa3.46□□□□□ -1.86
SWI1YPL016W RSP5P39940 809 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W ATM1P40416 690 aa3.46□□□□□ -1.86
SWI1YPL016W RGD2P43556 714 aa3.46□□□□□ -1.86
SWI1YPL016W AVT4P50944 713 aa3.46□□□□□ -1.86
SWI1YPL016W SLX9P53251 210 aaPredicted RBP3.46□□□□□ -1.86
SWI1YPL016W YGR117CP53270 476 aa3.46□□□□□ -1.86
SWI1YPL016W YAP1802P53309 568 aa3.46□□□□□ -1.86
SWI1YPL016W NCE103P53615 221 aa3.46□□□□□ -1.86
SWI1YPL016W PKR1Q03880 122 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W ATG41Q12048 136 aa3.46□□□□□ -1.86
SWI1YPL016W HOS1Q12214 470 aa3.46□□□□□ -1.86
SWI1YPL016W CMR1Q12510 522 aaKnown RBP3.46□□□□□ -1.86
SWI1YPL016W MOD5P07884 428 aa3.45□□□□□ -1.86
SWI1YPL016W LRE1P25579 583 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W KAR4P25583 335 aa3.45□□□□□ -1.86
SWI1YPL016W PDC2P32896 925 aa3.45□□□□□ -1.86
SWI1YPL016W MBA1P38300 278 aa3.45□□□□□ -1.86
SWI1YPL016W MPS3P47069 682 aa3.45□□□□□ -1.86
SWI1YPL016W SCY1P53009 804 aa3.45□□□□□ -1.86
SWI1YPL016W ART5P53244 586 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W LSM7P53905 115 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W YAP6Q03935 383 aa3.45□□□□□ -1.86
SWI1YPL016W GMC1Q04399 608 aa3.45□□□□□ -1.86
SWI1YPL016W BSC6Q08280 497 aa3.45□□□□□ -1.86
SWI1YPL016W YOR059CQ08448 450 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W YDR056CQ12025 205 aa3.45□□□□□ -1.86
SWI1YPL016W YLL058WQ12198 575 aa3.45□□□□□ -1.86
SWI1YPL016W CAR1P00812 333 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W MES1P00958 751 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W SAM2P19358 384 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W URA10P30402 227 aa3.45□□□□□ -1.86
SWI1YPL016W BUR6P40096 142 aa3.45□□□□□ -1.86
SWI1YPL016W OPT1P40897 799 aa3.45□□□□□ -1.86
SWI1YPL016W YCH1P42937 148 aa3.45□□□□□ -1.86
SWI1YPL016W IRC7P43623 340 aa3.45□□□□□ -1.86
SWI1YPL016W YJR149WP47177 404 aa3.45□□□□□ -1.86
SWI1YPL016W RIB4P50861 169 aaPredicted RBP3.45□□□□□ -1.86
SWI1YPL016W TRS130Q03660 1102 aa3.45□□□□□ -1.86
SWI1YPL016W ATG16Q03818 150 aa3.45□□□□□ -1.86
SWI1YPL016W RNH202Q05635 350 aa3.45□□□□□ -1.86
SWI1YPL016W ATG5Q12380 294 aa3.45□□□□□ -1.86
SWI1YPL016W YNR034W-AQ3E841 98 aa3.45□□□□□ -1.86
SWI1YPL016W RHO2P06781 192 aa3.45□□□□□ -1.86
SWI1YPL016W SGA1P08019 549 aa3.45□□□□□ -1.86
SWI1YPL016W YPR170W-BP0C5R9 85 aa3.45□□□□□ -1.86
SWI1YPL016W RPB5P20434 215 aa3.45□□□□□ -1.86
SWI1YPL016W RPS1BP23248 255 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W YPT7P32939 208 aa3.45□□□□□ -1.86
SWI1YPL016W RPS1AP33442 255 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W POP7P38291 140 aa3.45□□□□□ -1.86
SWI1YPL016W YBR197CP38306 217 aa3.45□□□□□ -1.86
SWI1YPL016W IES5P40060 125 aa3.45□□□□□ -1.86
SWI1YPL016W YIL108WP40483 696 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W VMA21P41806 77 aa3.45□□□□□ -1.86
SWI1YPL016W AIM23P47015 356 aa3.45□□□□□ -1.86
SWI1YPL016W UBP8P50102 471 aa3.45□□□□□ -1.86
SWI1YPL016W SOL1P50278 321 aa3.45□□□□□ -1.86
SWI1YPL016W SMM1P53720 384 aaKnown RBP3.45□□□□□ -1.86
SWI1YPL016W TDA1Q03533 586 aa3.45□□□□□ -1.86
SWI1YPL016W PFK27Q12471 397 aaPredicted RBP3.45□□□□□ -1.86
SWI1YPL016W CTF3Q12748 733 aa3.45□□□□□ -1.86
SWI1YPL016W YGR161W-CQ3E744 92 aa3.45□□□□□ -1.86
SWI1YPL016W FUR4P05316 633 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W ATP4P05626 244 aa3.44□□□□□ -1.86
SWI1YPL016W ERG20P08524 352 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W CDC34P14682 295 aa3.44□□□□□ -1.86
SWI1YPL016W KIN82P25341 720 aa3.44□□□□□ -1.86
SWI1YPL016W PET18P25362 215 aa3.44□□□□□ -1.86
SWI1YPL016W YCR061WP25639 631 aa3.44□□□□□ -1.86
SWI1YPL016W MRP17P28778 131 aa3.44□□□□□ -1.86
SWI1YPL016W ALY1P36117 915 aa3.44□□□□□ -1.86
SWI1YPL016W YBR241CP38142 488 aa3.44□□□□□ -1.86
SWI1YPL016W FSH1P38777 243 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W PFS1P38872 237 aa3.44□□□□□ -1.86
SWI1YPL016W EAF5P39995 279 aa3.44□□□□□ -1.86
SWI1YPL016W LSM4P40070 187 aaKnown RBP3.44□□□□□ -1.86
SWI1YPL016W PUS6P53294 404 aa3.44□□□□□ -1.86
SWI1YPL016W CYT2Q00873 224 aa3.44□□□□□ -1.86
SWI1YPL016W CDD1Q06549 142 aa3.44□□□□□ -1.86
SWI1YPL016W NDD1Q08887 554 aa3.44□□□□□ -1.86
SWI1YPL016W RKI1Q12189 258 aa3.44□□□□□ -1.86
SWI1YPL016W MSB2P32334 1306 aa3.44□□□□□ -1.86
SWI1YPL016W TRP4P07285 380 aaPredicted RBP3.44□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 37.5 ms