RNA–Protein interactions for RNA: YOR068C

VAM10, Transcript of Protein involved in vacuole morphogenesis, yeast

Gene VAM10, Length 345 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAM10	YOR068C	BBP1	Q12365	385 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	AGC1	Q12482	902 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	SFG1	Q12507	346 aa		3.15	□□□□□ -1.91
VAM10	YOR068C	TAF2	P23255	1407 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	MRP1	P10662	321 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	PMR1	P13586	950 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	CKI1	P20485	582 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	SEC14	P24280	304 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	RNA15	P25299	296 aa	Predicted RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	CPR4	P25334	318 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	RPS5	P26783	225 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	ITR2	P30606	609 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	YPS1	P32329	569 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	GSP1	P32835	219 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	GSP2	P32836	220 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	SKT5	P34226	696 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	UPS2	P35200	230 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	YNK1	P36010	153 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	SRL3	P36167	246 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	ZTA1	P38230	334 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	IML3	P38265	245 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	SHE3	P38272	425 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	MIC12	P38341	106 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	BIG1	P38813	335 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	RGI1	P40043	161 aa	Predicted RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	YIL060W	P40519	144 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	YJR111C	P47148	283 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	PYK2	P52489	506 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	SCW4	P53334	386 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	CWC27	Q02770	301 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	EKI1	Q03764	534 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	AIM33	Q04516	312 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	PEX10	Q05568	337 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	HCR1	Q05775	265 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	DXO1	Q06349	442 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	YDL218W	Q07629	317 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	SAM4	Q08985	325 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	PKH2	Q12236	1081 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	RGT2	Q12300	763 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	WTM1	Q12363	437 aa	Known RBP	3.14	□□□□□ -1.91
VAM10	YOR068C	ARP6	Q12509	438 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	YKL068W-A	Q3E826	78 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	UBA3	Q99344	299 aa		3.14	□□□□□ -1.91
VAM10	YOR068C	RPP0	P05317	312 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	PEP4	P07267	405 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	PUT1	P09368	476 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	COS2	P0CX12	379 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	COS3	P0CX13	379 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	PET54	P10834	293 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	MAS2	P11914	482 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	HPR1	P17629	752 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	SNT1	P25357	1226 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	PUT3	P25502	979 aa	Predicted RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	YIM1	P28625	365 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	RIM1	P32445	135 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	SUI1	P32911	108 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	RPS1A	P33442	255 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	PRS4	P38063	326 aa	Predicted RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	DUG2	P38149	878 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	TCM62	P38228	572 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	SPC97	P38863	823 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	NPT1	P39683	429 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	YAT2	P40017	923 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	ERG28	P40030	148 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	FCY21	P40039	528 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	YNL194C	P40169	301 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	YIL152W	P40455	235 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	YIR016W	P40572	265 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	CDC40	P40968	455 aa	Predicted RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	YFH7	P43591	353 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	SCD6	P45978	349 aa	Known RBP RIP-Chip data	3.13	□□□□□ -1.91	not detected
VAM10	YOR068C	YAR1	P46683	200 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	YJR054W	P47114	497 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	TRM112	P53738	135 aa	Predicted RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	YNL140C	P53910	189 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	YPL080C	Q02826	108 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	PLP1	Q04004	230 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	ADH6	Q04894	360 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	GLO2	Q05584	274 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	ECI1	Q05871	280 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	YLR031W	Q07978	186 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	TMS1	Q12116	473 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	RRP42	Q12277	265 aa	Predicted RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	PAA1	Q12447	191 aa	Known RBP	3.13	□□□□□ -1.91
VAM10	YOR068C	YCL001W-B	Q96VH2	84 aa		3.13	□□□□□ -1.91
VAM10	YOR068C	COX2	P00410	251 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	CDC28	P00546	298 aa	Known RBP	3.12	□□□□□ -1.91
VAM10	YOR068C	CAR1	P00812	333 aa	Known RBP	3.12	□□□□□ -1.91
VAM10	YOR068C	RPL25	P04456	142 aa	Known RBP	3.12	□□□□□ -1.91
VAM10	YOR068C	DST1	P07273	309 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	POX1	P13711	748 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	YMR31	P19955	123 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	TYR1	P20049	452 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	MRPS28	P21771	286 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	HXT2	P23585	541 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	ELO2	P25358	347 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	RRT12	P25381	491 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	TRR1	P29509	319 aa	Known RBP	3.12	□□□□□ -1.91
VAM10	YOR068C	NDC1	P32500	655 aa		3.12	□□□□□ -1.91
VAM10	YOR068C	TMT1	P32643	299 aa		3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 30.3 ms