RNA–Protein interactions for RNA: YNR006W

VPS27, Transcript of Endosomal protein that forms a complex with Hse1p, yeastyeast

Gene VPS27, Length 1,869 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS27YNR006W VPS74Q06385 345 aa3.45□□□□□ -1.86
VPS27YNR006W ASR1Q06834 288 aa3.45□□□□□ -1.86
VPS27YNR006W YKL183C-AQ3E765 70 aa3.45□□□□□ -1.86
VPS27YNR006W RAD9P14737 1309 aa3.44□□□□□ -1.86
VPS27YNR006W MATALPHA2P0CY08 210 aa3.44□□□□□ -1.86
VPS27YNR006W HMLALPHA2P0CY09 210 aa3.44□□□□□ -1.86
VPS27YNR006W MRP1P10662 321 aaKnown RBP3.44□□□□□ -1.86
VPS27YNR006W REV1P12689 985 aa3.44□□□□□ -1.86
VPS27YNR006W URE2P23202 354 aaKnown RBP3.44□□□□□ -1.86
VPS27YNR006W SIP2P34164 415 aaKnown RBP3.44□□□□□ -1.86
VPS27YNR006W YNK1P36010 153 aaKnown RBP3.44□□□□□ -1.86
VPS27YNR006W YHR035WP38769 630 aa3.44□□□□□ -1.86
VPS27YNR006W DDI1P40087 428 aa3.44□□□□□ -1.86
VPS27YNR006W DSN1P40568 576 aa3.44□□□□□ -1.86
VPS27YNR006W GDS1P41913 522 aa3.44□□□□□ -1.86
VPS27YNR006W NBP1P52919 319 aaPredicted RBP3.44□□□□□ -1.86
VPS27YNR006W YNL181WP53878 407 aa3.44□□□□□ -1.86
VPS27YNR006W RSC9Q03124 581 aa3.44□□□□□ -1.86
VPS27YNR006W BCH1Q05029 724 aa3.44□□□□□ -1.86
VPS27YNR006W RTT103Q05543 409 aa3.44□□□□□ -1.86
VPS27YNR006W SRO7Q12038 1033 aa3.44□□□□□ -1.86
VPS27YNR006W CMC2Q3E7A4 109 aa3.44□□□□□ -1.86
VPS27YNR006W NCB2Q92317 146 aa3.44□□□□□ -1.86
VPS27YNR006W HIS1P00498 297 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W PEX2P32800 271 aa3.43□□□□□ -1.86
VPS27YNR006W TAF14P35189 244 aa3.43□□□□□ -1.86
VPS27YNR006W CHK1P38147 527 aa3.43□□□□□ -1.86
VPS27YNR006W MRX3P38172 270 aa3.43□□□□□ -1.86
VPS27YNR006W PRS2P38620 318 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W CWC23P52868 283 aaPredicted RBP3.43□□□□□ -1.86
VPS27YNR006W POP6P53218 158 aa3.43□□□□□ -1.86
VPS27YNR006W GIM5Q04493 163 aa3.43□□□□□ -1.86
VPS27YNR006W YCL012CQ8J0M4 134 aa3.43□□□□□ -1.86
VPS27YNR006W HIR3P47171 1648 aa3.43□□□□□ -1.86
VPS27YNR006W STE18P18852 110 aa3.43□□□□□ -1.86
VPS27YNR006W SAM2P19358 384 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W YKL187CP34231 750 aa3.43□□□□□ -1.86
VPS27YNR006W TES1P41903 349 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W YRB1P41920 201 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W YJR030CP47101 745 aa3.43□□□□□ -1.86
VPS27YNR006W LIF1P53150 421 aa3.43□□□□□ -1.86
VPS27YNR006W IDP3P53982 420 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W SEC13Q04491 297 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W YDR222WQ04925 415 aa3.43□□□□□ -1.86
VPS27YNR006W YMR226CQ05016 267 aaKnown RBP3.43□□□□□ -1.86
VPS27YNR006W ECI1Q05871 280 aa3.43□□□□□ -1.86
VPS27YNR006W YLR012CQ07927 99 aa3.43□□□□□ -1.86
VPS27YNR006W POM33Q12164 279 aa3.43□□□□□ -1.86
VPS27YNR006W RPN6Q12377 434 aa3.43□□□□□ -1.86
VPS27YNR006W XRN1P22147 1528 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W RPP0P05317 312 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W RPL42AP0CX27 106 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W RPL42BP0CX28 106 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W CBF1P17106 351 aa3.42□□□□□ -1.86
VPS27YNR006W SLY1P22213 666 aa3.42□□□□□ -1.86
VPS27YNR006W ITR2P30606 609 aa3.42□□□□□ -1.86
VPS27YNR006W PHA2P32452 334 aa3.42□□□□□ -1.86
VPS27YNR006W ATO2P32907 282 aa3.42□□□□□ -1.86
VPS27YNR006W YKL063CP35725 167 aa3.42□□□□□ -1.86
VPS27YNR006W VPS21P36017 210 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W YNL194CP40169 301 aa3.42□□□□□ -1.86
VPS27YNR006W JLP2P40206 208 aa3.42□□□□□ -1.86
VPS27YNR006W WWM1P43582 211 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W JHD2P47156 728 aaPredicted RBP3.42□□□□□ -1.86
VPS27YNR006W MST27P53176 234 aa3.42□□□□□ -1.86
VPS27YNR006W ZRG17P53735 605 aa3.42□□□□□ -1.86
VPS27YNR006W DIA1P54005 336 aa3.42□□□□□ -1.86
VPS27YNR006W SLM3Q12093 417 aa3.42□□□□□ -1.86
VPS27YNR006W YRA1Q12159 226 aaKnown RBP3.42□□□□□ -1.86
VPS27YNR006W MTF1P14908 341 aaKnown RBP3.41□□□□□ -1.86
VPS27YNR006W YMR31P19955 123 aa3.41□□□□□ -1.86
VPS27YNR006W POF1P25576 258 aa3.41□□□□□ -1.86
VPS27YNR006W CSE1P33307 960 aa3.41□□□□□ -1.86
VPS27YNR006W YPC1P38298 316 aa3.41□□□□□ -1.86
VPS27YNR006W ERG10P41338 398 aaKnown RBP3.41□□□□□ -1.86
VPS27YNR006W PMT4P46971 762 aa3.41□□□□□ -1.86
VPS27YNR006W TAD2P47058 250 aa3.41□□□□□ -1.86
VPS27YNR006W CDH1P53197 566 aa3.41□□□□□ -1.86
VPS27YNR006W CPD1P53314 239 aa3.41□□□□□ -1.86
VPS27YNR006W NOP19P53317 196 aaPredicted RBP3.41□□□□□ -1.86
VPS27YNR006W MUM3Q08750 479 aa3.41□□□□□ -1.86
VPS27YNR006W CSM4Q08955 156 aa3.41□□□□□ -1.86
VPS27YNR006W YDR157WA0A023PZE8 133 aa3.41□□□□□ -1.86
VPS27YNR006W POX1P13711 748 aa3.41□□□□□ -1.86
VPS27YNR006W KAR9P32526 644 aa3.41□□□□□ -1.86
VPS27YNR006W EGD2P38879 174 aaKnown RBP3.41□□□□□ -1.86
VPS27YNR006W THO1P40040 218 aaKnown RBP3.41□□□□□ -1.86
VPS27YNR006W AZF1P41696 914 aa3.41□□□□□ -1.86
VPS27YNR006W YNL040WP53960 456 aaPredicted RBP3.41□□□□□ -1.86
VPS27YNR006W YMR181CQ03231 154 aa3.41□□□□□ -1.86
VPS27YNR006W SNX41Q04053 625 aa3.41□□□□□ -1.86
VPS27YNR006W ORM2Q06144 216 aa3.41□□□□□ -1.86
VPS27YNR006W ABP140Q08641 628 aaKnown RBP3.41□□□□□ -1.86
VPS27YNR006W IZH4Q99393 312 aa3.41□□□□□ -1.86
VPS27YNR006W ILV1P00927 576 aaKnown RBP3.4□□□□□ -1.87
VPS27YNR006W REP1P03871 373 aa3.4□□□□□ -1.87
VPS27YNR006W RPL27AP0C2H6 136 aaKnown RBP3.4□□□□□ -1.87
VPS27YNR006W RPL27BP0C2H7 136 aaKnown RBP3.4□□□□□ -1.87
VPS27YNR006W YBR121C-AP0C5L4 52 aa3.4□□□□□ -1.87
VPS27YNR006W YER190C-BP0CX94 160 aa3.4□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms