RNA–Protein interactions for RNA: YMR075W

RCO1, Transcript of Essential component of the Rpd3S histone deacetylase complex, yeast

Gene RCO1, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RCO1	YMR075W	IFM1	P25038	676 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	ANP1	P32629	500 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	YSC83	P32792	385 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	TIP20	P33891	701 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	ZRT3	P34240	503 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	AIM29	P36154	155 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	ASC1	P38011	319 aa	Known RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	IST2	P38250	946 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	KRE29	P40026	464 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	SPO73	P40031	143 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	YIA6	P40556	373 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	RPL10	P41805	221 aa	Known RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	YFR054C	P43622	192 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	CIN2	P46670	268 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	RPE1	P46969	238 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	YJR141W	P47172	347 aa	Predicted RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	BAT2	P47176	376 aa	Known RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	TOM22	P49334	152 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	FMP48	P53233	369 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	EOS1	P53938	366 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	SMD1	Q02260	146 aa	Predicted RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	SMP3	Q04174	516 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	YDR341C	Q05506	607 aa	Known RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	SPH1	Q06160	661 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	YLH47	Q06493	454 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	ALE1	Q08548	619 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	PRP46	Q12417	451 aa	Predicted RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	DCP1	Q12517	231 aa	Predicted RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	TFB5	Q3E7C1	72 aa	Predicted RBP	0.24	□□□□□ -2.37
RCO1	YMR075W	FSH3	Q99369	266 aa		0.24	□□□□□ -2.37
RCO1	YMR075W	GEX1	P25596	615 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	URA7	P28274	579 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	ACB1	P31787	87 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YPS1	P32329	569 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	CDC13	P32797	924 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	YKL187C	P34231	750 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	DBP7	P36120	742 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	VTC1	P40046	129 aa	RIP-Chip data	0.23	□□□□□ -2.37	not detected
RCO1	YMR075W	TOS2	P50078	622 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	SEH1	P53011	349 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	COG7	P53195	279 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	COS1	P53822	381 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	ALG9	P53868	555 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	BUR2	Q05949	395 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YLL007C	Q07799	665 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	CLP1	Q08685	445 aa	Predicted RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	SAM4	Q08985	325 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	SGT2	Q12118	346 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	RNH203	Q12338	110 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YPR1	Q12458	312 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	NBL1	Q3E7Y6	73 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	IZH4	Q99393	312 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YOL163W	P0CF20	169 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	RPS23A	P0CX29	145 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	RPS23B	P0CX30	145 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	MSS116	P15424	664 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	THR4	P16120	514 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	PHO80	P20052	293 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	IMP1	P28627	190 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	VMA5	P31412	392 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	NIP1	P32497	812 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	CYM1	P32898	989 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	CLB6	P32943	380 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	SUR1	P33300	382 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	FRM2	P37261	193 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	SPP381	P38282	291 aa	Predicted RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	PHO89	P38361	574 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	MLH1	P38920	769 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YER188W	P40103	239 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YIL012W	P40551	113 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	RPA34	P47006	233 aa	Predicted RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	YHC3	P47040	408 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	PRP24	P49960	444 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	YGL114W	P53134	725 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	SWC4	P53201	476 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	BIO4	P53630	237 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YNL040W	P53960	456 aa	Predicted RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	SVL3	Q03088	825 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	PRM15	Q03262	622 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	TRM82	Q03774	444 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	CAB5	Q03941	241 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	TAF11	Q04226	346 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	AIM33	Q04516	312 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	SUE1	Q06524	206 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	NDL1	Q06568	189 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	PLB3	Q08108	686 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	SPE3	Q12074	293 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	MCT1	Q12283	360 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	GPM3	Q12326	303 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	UTP23	Q12339	254 aa	Known RBP	0.23	□□□□□ -2.37
RCO1	YMR075W	TRM10	Q12400	293 aa		0.23	□□□□□ -2.37
RCO1	YMR075W	YMR316C-A	I2HB70	103 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	REP1	P03871	373 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	ADH3	P07246	375 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	ARO3	P14843	370 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	KRE1	P17260	313 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	COX10	P21592	462 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	MNE1	P24720	663 aa		0.22	□□□□□ -2.37
RCO1	YMR075W	BMH1	P29311	267 aa	Known RBP	0.22	□□□□□ -2.37
RCO1	YMR075W	ERG9	P29704	444 aa		0.22	□□□□□ -2.37

Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms