RNA–Protein interactions for RNA: YLR260W

LCB5, Transcript of Minor sphingoid long-chain base kinase, yeastyeast

Gene LCB5, Length 2,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB5YLR260W SLD7Q08457 257 aa3.32□□□□□ -1.88
LCB5YLR260W DIA2Q08496 732 aaPredicted RBP3.32□□□□□ -1.88
LCB5YLR260W PEX27Q08580 376 aa3.32□□□□□ -1.88
LCB5YLR260W RKM5Q12367 367 aa3.32□□□□□ -1.88
LCB5YLR260W SEY1Q99287 776 aa3.32□□□□□ -1.88
LCB5YLR260W RPL24BP24000 155 aaKnown RBP3.32□□□□□ -1.88
LCB5YLR260W DCC1P25559 380 aa3.32□□□□□ -1.88
LCB5YLR260W GMH1P36125 273 aa3.32□□□□□ -1.88
LCB5YLR260W YPK3P38070 525 aa3.32□□□□□ -1.88
LCB5YLR260W QDR3P38227 689 aa3.32□□□□□ -1.88
LCB5YLR260W SPC97P38863 823 aa3.32□□□□□ -1.88
LCB5YLR260W CTK3P46963 296 aaPredicted RBP3.32□□□□□ -1.88
LCB5YLR260W RIM8P53179 542 aa3.32□□□□□ -1.88
LCB5YLR260W FHN1P53279 174 aa3.32□□□□□ -1.88
LCB5YLR260W MRPL22P53881 309 aa3.32□□□□□ -1.88
LCB5YLR260W MTQ1P53944 314 aa3.32□□□□□ -1.88
LCB5YLR260W NUP100Q02629 959 aa3.32□□□□□ -1.88
LCB5YLR260W YMR178WQ03219 274 aaKnown RBP3.32□□□□□ -1.88
LCB5YLR260W IZH1Q03419 316 aa3.32□□□□□ -1.88
LCB5YLR260W YMR114CQ04471 368 aaKnown RBP3.32□□□□□ -1.88
LCB5YLR260W MDM30Q05930 598 aa3.32□□□□□ -1.88
LCB5YLR260W RGC1Q06108 1083 aaKnown RBP3.32□□□□□ -1.88
LCB5YLR260W YOL159CQ08300 171 aa3.32□□□□□ -1.88
LCB5YLR260W YLL056CQ12177 298 aa3.32□□□□□ -1.88
LCB5YLR260W YLR108CQ12259 485 aa3.32□□□□□ -1.88
LCB5YLR260W NOT5Q12514 560 aaPredicted RBP3.32□□□□□ -1.88
LCB5YLR260W YER175W-AQ8TGU4 54 aa3.32□□□□□ -1.88
LCB5YLR260W YBR056W-AI2HB52 66 aa3.31□□□□□ -1.88
LCB5YLR260W THP2O13539 261 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W ADH2P00331 348 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W SUC2P00724 532 aa3.31□□□□□ -1.88
LCB5YLR260W RIP1P08067 215 aa3.31□□□□□ -1.88
LCB5YLR260W TUB1P09733 447 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W SNF6P18888 332 aa3.31□□□□□ -1.88
LCB5YLR260W FEN2P25621 512 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W CDC20P26309 610 aa3.31□□□□□ -1.88
LCB5YLR260W NRP1P32770 719 aaKnown RBP RIP-Chip data3.31□□□□□ -1.88not detected
LCB5YLR260W SPO23P33757 523 aa3.31□□□□□ -1.88
LCB5YLR260W SNU114P36048 1008 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W OLA1P38219 394 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W SDH8P38345 138 aa3.31□□□□□ -1.88
LCB5YLR260W UIP3P39547 235 aa3.31□□□□□ -1.88
LCB5YLR260W NDC80P40460 691 aa3.31□□□□□ -1.88
LCB5YLR260W ICE2P40499 491 aa3.31□□□□□ -1.88
LCB5YLR260W BUD13P46947 266 aaPredicted RBP3.31□□□□□ -1.88
LCB5YLR260W YGL117WP53133 265 aa3.31□□□□□ -1.88
LCB5YLR260W NRM1P53718 249 aa3.31□□□□□ -1.88
LCB5YLR260W TEX1P53851 422 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W RIM13Q03792 727 aa3.31□□□□□ -1.88
LCB5YLR260W SPC24Q04477 213 aa3.31□□□□□ -1.88
LCB5YLR260W YML096WQ04489 525 aa3.31□□□□□ -1.88
LCB5YLR260W AIM45Q12480 344 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W COX1P00401 534 aa3.31□□□□□ -1.88
LCB5YLR260W STE18P18852 110 aa3.31□□□□□ -1.88
LCB5YLR260W AEP1P32493 518 aa3.31□□□□□ -1.88
LCB5YLR260W STE14P32584 239 aa3.31□□□□□ -1.88
LCB5YLR260W RAD5P32849 1169 aaPredicted RBP3.31□□□□□ -1.88
LCB5YLR260W PDR3P33200 976 aa3.31□□□□□ -1.88
LCB5YLR260W AST1P35183 429 aa3.31□□□□□ -1.88
LCB5YLR260W PRS4P38063 326 aaPredicted RBP3.31□□□□□ -1.88
LCB5YLR260W ICS2P38284 255 aa3.31□□□□□ -1.88
LCB5YLR260W VHC1P38329 1120 aa3.31□□□□□ -1.88
LCB5YLR260W UBA4P38820 440 aa3.31□□□□□ -1.88
LCB5YLR260W ERV46P39727 415 aa3.31□□□□□ -1.88
LCB5YLR260W GAB1P41733 394 aa3.31□□□□□ -1.88
LCB5YLR260W PTR3P43606 678 aa3.31□□□□□ -1.88
LCB5YLR260W ATG27P46989 271 aa3.31□□□□□ -1.88
LCB5YLR260W YJL163CP46996 555 aa3.31□□□□□ -1.88
LCB5YLR260W BNA3P47039 444 aaKnown RBP3.31□□□□□ -1.88
LCB5YLR260W MSY1P48527 492 aa3.31□□□□□ -1.88
LCB5YLR260W YGL159WP53110 370 aa3.31□□□□□ -1.88
LCB5YLR260W SWC4P53201 476 aa3.31□□□□□ -1.88
LCB5YLR260W GTF1P53260 183 aaPredicted RBP3.31□□□□□ -1.88
LCB5YLR260W COG2P53271 262 aa3.31□□□□□ -1.88
LCB5YLR260W RRN9P53437 365 aa3.31□□□□□ -1.88
LCB5YLR260W MRS2Q01926 470 aa3.31□□□□□ -1.88
LCB5YLR260W MSC1Q03104 513 aa3.31□□□□□ -1.88
LCB5YLR260W YMR209CQ03648 457 aa3.31□□□□□ -1.88
LCB5YLR260W DCR2Q05924 578 aa3.31□□□□□ -1.88
LCB5YLR260W SPO77Q06134 477 aa3.31□□□□□ -1.88
LCB5YLR260W YOR338WQ99326 363 aa3.31□□□□□ -1.88
LCB5YLR260W YPT1P01123 206 aaKnown RBP3.3□□□□□ -1.88
LCB5YLR260W YLL053CP0CD98 152 aa3.3□□□□□ -1.88
LCB5YLR260W SPT15P13393 240 aaKnown RBP3.3□□□□□ -1.88
LCB5YLR260W FBA1P14540 359 aaKnown RBP3.3□□□□□ -1.88
LCB5YLR260W SIN4P32259 974 aa3.3□□□□□ -1.88
LCB5YLR260W MSS1P32559 526 aaPredicted RBP3.3□□□□□ -1.88
LCB5YLR260W BMT2P38278 337 aa3.3□□□□□ -1.88
LCB5YLR260W AME1P38313 324 aa3.3□□□□□ -1.88
LCB5YLR260W MIC12P38341 106 aa3.3□□□□□ -1.88
LCB5YLR260W RRP3P38712 501 aaKnown RBP3.3□□□□□ -1.88
LCB5YLR260W MBB1P39534 108 aa3.3□□□□□ -1.88
LCB5YLR260W ERG28P40030 148 aa3.3□□□□□ -1.88
LCB5YLR260W THO1P40040 218 aaKnown RBP3.3□□□□□ -1.88
LCB5YLR260W YMR134WP40207 237 aa3.3□□□□□ -1.88
LCB5YLR260W SNL1P40548 159 aa3.3□□□□□ -1.88
LCB5YLR260W YFL012WP43580 148 aa3.3□□□□□ -1.88
LCB5YLR260W YDL186WP48568 277 aa3.3□□□□□ -1.88
LCB5YLR260W VMA10P48836 114 aaKnown RBP3.3□□□□□ -1.88
LCB5YLR260W MTL1P53214 551 aa3.3□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 58.9 ms