RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C RBD2Q12270 262 aa3.39□□□□□ -1.87
USB1YLR132C TEL1P38110 2787 aa3.39□□□□□ -1.87
USB1YLR132C STE3P06783 470 aa3.38□□□□□ -1.87
USB1YLR132C RPS18AP0CX55 146 aaKnown RBP3.38□□□□□ -1.87
USB1YLR132C RPS18BP0CX56 146 aaPredicted RBP3.38□□□□□ -1.87
USB1YLR132C DBR1P24309 405 aaKnown RBP3.38□□□□□ -1.87
USB1YLR132C RPL16AP26784 199 aaKnown RBP3.38□□□□□ -1.87
USB1YLR132C FUN26P31381 517 aa3.38□□□□□ -1.87
USB1YLR132C NUP2P32499 720 aa3.38□□□□□ -1.87
USB1YLR132C SPO23P33757 523 aa3.38□□□□□ -1.87
USB1YLR132C LSM12P38828 187 aaKnown RBP3.38□□□□□ -1.87
USB1YLR132C MIG3P39943 394 aa3.38□□□□□ -1.87
USB1YLR132C GAB1P41733 394 aa3.38□□□□□ -1.87
USB1YLR132C EGT2P42835 1041 aa3.38□□□□□ -1.87
USB1YLR132C LIF1P53150 421 aa3.38□□□□□ -1.87
USB1YLR132C HST1P53685 503 aa3.38□□□□□ -1.87
USB1YLR132C REX2P54964 269 aaKnown RBP3.38□□□□□ -1.87
USB1YLR132C YDR286CQ05530 114 aa3.38□□□□□ -1.87
USB1YLR132C ARR1Q06596 294 aa3.38□□□□□ -1.87
USB1YLR132C TMC1Q08422 150 aaPredicted RBP3.38□□□□□ -1.87
USB1YLR132C STF1P01098 86 aa3.37□□□□□ -1.87
USB1YLR132C ATG18P43601 500 aa3.37□□□□□ -1.87
USB1YLR132C ADD37Q03233 198 aa3.37□□□□□ -1.87
USB1YLR132C YET2Q04210 160 aa3.37□□□□□ -1.87
USB1YLR132C AIM33Q04516 312 aa3.37□□□□□ -1.87
USB1YLR132C YOL075CQ08234 1294 aa3.37□□□□□ -1.87
USB1YLR132C YDL199CQ12407 687 aa3.37□□□□□ -1.87
USB1YLR132C STE7P06784 515 aa3.36□□□□□ -1.87
USB1YLR132C CDC50P25656 391 aa3.36□□□□□ -1.87
USB1YLR132C VAM7P32912 316 aa3.36□□□□□ -1.87
USB1YLR132C MYO3P36006 1272 aa3.36□□□□□ -1.87
USB1YLR132C DRE2P36152 348 aa3.36□□□□□ -1.87
USB1YLR132C RBG1P39729 369 aa3.36□□□□□ -1.87
USB1YLR132C LCP5P40079 357 aaPredicted RBP3.36□□□□□ -1.87
USB1YLR132C MOB1P40484 314 aa3.36□□□□□ -1.87
USB1YLR132C FYV8P46949 817 aaKnown RBP3.36□□□□□ -1.87
USB1YLR132C EFM3P47163 339 aa3.36□□□□□ -1.87
USB1YLR132C BNS1P50084 137 aa3.36□□□□□ -1.87
USB1YLR132C LSB1P53281 241 aa3.36□□□□□ -1.87
USB1YLR132C PDR16P53860 351 aaKnown RBP3.36□□□□□ -1.87
USB1YLR132C YNL146WP53906 100 aa3.36□□□□□ -1.87
USB1YLR132C MHR1Q06630 226 aa3.36□□□□□ -1.87
USB1YLR132C PML1Q07930 204 aaPredicted RBP3.36□□□□□ -1.87
USB1YLR132C PSY3Q12318 242 aa3.36□□□□□ -1.87
USB1YLR132C HIF1Q12373 385 aa3.36□□□□□ -1.87
USB1YLR132C IRA2P19158 3079 aa3.36□□□□□ -1.87
USB1YLR132C YLL053CP0CD98 152 aa3.35□□□□□ -1.87
USB1YLR132C SAG1P20840 650 aa3.35□□□□□ -1.87
USB1YLR132C KRR1P25586 316 aaPredicted RBP3.35□□□□□ -1.87
USB1YLR132C DEP1P31385 405 aa3.35□□□□□ -1.87
USB1YLR132C RME1P32338 300 aaKnown RBP3.35□□□□□ -1.87
USB1YLR132C YKR015CP36111 568 aa3.35□□□□□ -1.87
USB1YLR132C YER186CP40101 306 aa3.35□□□□□ -1.87
USB1YLR132C SMP3Q04174 516 aa3.35□□□□□ -1.87
USB1YLR132C APC5Q08683 685 aa3.35□□□□□ -1.87
USB1YLR132C SFG1Q12507 346 aa3.35□□□□□ -1.87
USB1YLR132C RGS2Q99188 309 aa3.35□□□□□ -1.87
USB1YLR132C PDR18P53756 1333 aa3.35□□□□□ -1.87
USB1YLR132C HEM4P06174 275 aa3.34□□□□□ -1.87
USB1YLR132C TPM1P17536 199 aaKnown RBP3.34□□□□□ -1.87
USB1YLR132C ARF2P19146 181 aaKnown RBP3.34□□□□□ -1.87
USB1YLR132C HXT2P23585 541 aa3.34□□□□□ -1.87
USB1YLR132C GIT1P25346 518 aa3.34□□□□□ -1.87
USB1YLR132C LDS1P31379 325 aa3.34□□□□□ -1.87
USB1YLR132C IES6P32617 166 aa3.34□□□□□ -1.87
USB1YLR132C ANR2P36090 516 aaPredicted RBP3.34□□□□□ -1.87
USB1YLR132C TVP38P36164 337 aa3.34□□□□□ -1.87
USB1YLR132C OM14P38325 134 aa3.34□□□□□ -1.87
USB1YLR132C HMF1P40037 129 aaKnown RBP3.34□□□□□ -1.87
USB1YLR132C YHC3P47040 408 aa3.34□□□□□ -1.87
USB1YLR132C YJR030CP47101 745 aa3.34□□□□□ -1.87
USB1YLR132C ABM1P47146 123 aa3.34□□□□□ -1.87
USB1YLR132C YLR152CP54072 576 aa3.34□□□□□ -1.87
USB1YLR132C SKI8Q02793 397 aaPredicted RBP3.34□□□□□ -1.87
USB1YLR132C YLH47Q06493 454 aa3.34□□□□□ -1.87
USB1YLR132C YPR078CQ06813 372 aa3.34□□□□□ -1.87
USB1YLR132C GAT3Q07928 141 aa3.34□□□□□ -1.87
USB1YLR132C YDL109CQ12103 647 aa3.34□□□□□ -1.87
USB1YLR132C APC2Q12440 853 aa3.34□□□□□ -1.87
USB1YLR132C LAA1P39526 2014 aa3.34□□□□□ -1.88
USB1YLR132C CKI1P20485 582 aa3.33□□□□□ -1.88
USB1YLR132C GRR1P24814 1151 aa3.33□□□□□ -1.88
USB1YLR132C HXT1P32465 570 aa3.33□□□□□ -1.88
USB1YLR132C BUD2P33314 1104 aa3.33□□□□□ -1.88
USB1YLR132C COS9P36034 407 aa3.33□□□□□ -1.88
USB1YLR132C POP2P39008 433 aa3.33□□□□□ -1.88
USB1YLR132C PTI1P39927 425 aaPredicted RBP3.33□□□□□ -1.88
USB1YLR132C YGL114WP53134 725 aa3.33□□□□□ -1.88
USB1YLR132C LST7P53237 242 aa3.33□□□□□ -1.88
USB1YLR132C HAL1Q01766 294 aa3.33□□□□□ -1.88
USB1YLR132C MSC3Q05812 728 aa3.33□□□□□ -1.88
USB1YLR132C SEN1Q00416 2231 aaKnown RBP3.32□□□□□ -1.88
USB1YLR132C ZRC1P20107 442 aa3.32□□□□□ -1.88
USB1YLR132C SPR1P32603 445 aa3.32□□□□□ -1.88
USB1YLR132C SOL2P37262 315 aa3.32□□□□□ -1.88
USB1YLR132C GPI18P38211 433 aa3.32□□□□□ -1.88
USB1YLR132C YHL026CP38740 315 aa3.32□□□□□ -1.88
USB1YLR132C BAT1P38891 393 aaKnown RBP3.32□□□□□ -1.88
USB1YLR132C ALP1P38971 573 aa3.32□□□□□ -1.88
USB1YLR132C YMR134WP40207 237 aa3.32□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 24.9 ms