RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeastyeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP82YJL061W YDR262WQ12331 272 aa1.79□□□□□ -2.12
NUP82YJL061W TRX1P22217 103 aaKnown RBP1.78□□□□□ -2.12
NUP82YJL061W ZIP1P31111 875 aa1.78□□□□□ -2.12
NUP82YJL061W VMA5P31412 392 aaKnown RBP1.78□□□□□ -2.12
NUP82YJL061W DTR1P38125 572 aa1.78□□□□□ -2.12
NUP82YJL061W TAF6P53040 516 aa1.78□□□□□ -2.12
NUP82YJL061W YGR067CP53243 804 aa1.78□□□□□ -2.12
NUP82YJL061W API2Q04413 109 aa1.78□□□□□ -2.12
NUP82YJL061W RPN6Q12377 434 aa1.78□□□□□ -2.12
NUP82YJL061W CTA1P15202 515 aa1.78□□□□□ -2.13
NUP82YJL061W ITR2P30606 609 aa1.78□□□□□ -2.13
NUP82YJL061W ACB1P31787 87 aa1.78□□□□□ -2.13
NUP82YJL061W RAD23P32628 398 aaKnown RBP1.78□□□□□ -2.13
NUP82YJL061W SRB2P34162 210 aa1.78□□□□□ -2.13
NUP82YJL061W YFR018CP43599 363 aa1.78□□□□□ -2.13
NUP82YJL061W PXR1P53335 271 aaPredicted RBP1.78□□□□□ -2.13
NUP82YJL061W SCS7Q03529 384 aa1.78□□□□□ -2.13
NUP82YJL061W RVB1Q03940 463 aaKnown RBP1.78□□□□□ -2.13
NUP82YJL061W MGR3Q04472 501 aa1.78□□□□□ -2.13
NUP82YJL061W BUR2Q05949 395 aa1.78□□□□□ -2.13
NUP82YJL061W TAF10Q12030 206 aa1.78□□□□□ -2.13
NUP82YJL061W TIP20P33891 701 aa1.77□□□□□ -2.13
NUP82YJL061W KTI12P34253 313 aaKnown RBP1.77□□□□□ -2.13
NUP82YJL061W HIT1P46973 164 aa1.77□□□□□ -2.13
NUP82YJL061W FAR10Q06001 478 aa1.77□□□□□ -2.13
NUP82YJL061W SPH1Q06160 661 aa1.77□□□□□ -2.13
NUP82YJL061W YAL067W-AQ8TGK6 75 aa1.77□□□□□ -2.13
NUP82YJL061W YOL085CQ99345 113 aa1.77□□□□□ -2.13
NUP82YJL061W VPS63O13549 108 aa1.76□□□□□ -2.13
NUP82YJL061W GAL3P13045 520 aa1.76□□□□□ -2.13
NUP82YJL061W MEI5P32489 222 aa1.76□□□□□ -2.13
NUP82YJL061W FHL1P39521 936 aa1.76□□□□□ -2.13
NUP82YJL061W DTD1Q07648 150 aaKnown RBP1.76□□□□□ -2.13
NUP82YJL061W YOL029CQ08187 201 aa1.76□□□□□ -2.13
NUP82YJL061W MHP1P43638 1398 aa1.76□□□□□ -2.13
NUP82YJL061W AUS1Q08409 1394 aa1.76□□□□□ -2.13
NUP82YJL061W CDC37P06101 506 aaKnown RBP1.76□□□□□ -2.13
NUP82YJL061W KRR1P25586 316 aaPredicted RBP1.76□□□□□ -2.13
NUP82YJL061W TAE1P38340 232 aa1.76□□□□□ -2.13
NUP82YJL061W MRX8Q05473 314 aa1.76□□□□□ -2.13
NUP82YJL061W REP1P03871 373 aa1.75□□□□□ -2.13
NUP82YJL061W CKA2P19454 339 aa1.75□□□□□ -2.13
NUP82YJL061W UFE1P41834 346 aa1.75□□□□□ -2.13
NUP82YJL061W YGR168CP53293 376 aa1.75□□□□□ -2.13
NUP82YJL061W UTP15Q04305 513 aaKnown RBP1.75□□□□□ -2.13
NUP82YJL061W APC4Q04601 652 aa1.75□□□□□ -2.13
NUP82YJL061W SLF1Q12034 447 aaKnown RBP1.75□□□□□ -2.13
NUP82YJL061W PRM4Q12498 284 aa1.75□□□□□ -2.13
NUP82YJL061W CBF5P33322 483 aaKnown RBP RIP-Chip data1.75□□□□□ -2.13not detected
NUP82YJL061W DBP7P36120 742 aaKnown RBP1.75□□□□□ -2.13
NUP82YJL061W SMF2P38778 549 aa1.75□□□□□ -2.13
NUP82YJL061W FRT2P39734 528 aa1.75□□□□□ -2.13
NUP82YJL061W MRX9Q07349 420 aaKnown RBP1.75□□□□□ -2.13
NUP82YJL061W RDL2Q08742 149 aaKnown RBP1.75□□□□□ -2.13
NUP82YJL061W YDR018CQ12185 396 aa1.75□□□□□ -2.13
NUP82YJL061W STF1P01098 86 aa1.74□□□□□ -2.13
NUP82YJL061W RPL18AP0CX49 186 aaKnown RBP1.74□□□□□ -2.13
NUP82YJL061W RPL18BP0CX50 186 aaKnown RBP1.74□□□□□ -2.13
NUP82YJL061W FUS3P16892 353 aaKnown RBP1.74□□□□□ -2.13
NUP82YJL061W PET18P25362 215 aa1.74□□□□□ -2.13
NUP82YJL061W TPS2P31688 896 aaKnown RBP1.74□□□□□ -2.13
NUP82YJL061W CTM1P38818 585 aa1.74□□□□□ -2.13
NUP82YJL061W SSO2P39926 295 aa1.74□□□□□ -2.13
NUP82YJL061W UTP25P40498 721 aaKnown RBP1.74□□□□□ -2.13
NUP82YJL061W STE23Q06010 1027 aa1.74□□□□□ -2.13
NUP82YJL061W FLO11P08640 1367 aa1.74□□□□□ -2.13
NUP82YJL061W SAL1D6W196 494 aa1.73□□□□□ -2.13
NUP82YJL061W YPS1P32329 569 aa1.73□□□□□ -2.13
NUP82YJL061W FMT1P32785 401 aa1.73□□□□□ -2.13
NUP82YJL061W YKL187CP34231 750 aa1.73□□□□□ -2.13
NUP82YJL061W TRR2P38816 342 aa1.73□□□□□ -2.13
NUP82YJL061W POP2P39008 433 aa1.73□□□□□ -2.13
NUP82YJL061W END3P39013 349 aa1.73□□□□□ -2.13
NUP82YJL061W INA22P40576 216 aa1.73□□□□□ -2.13
NUP82YJL061W YIR035CP40579 254 aa1.73□□□□□ -2.13
NUP82YJL061W MIC19P43594 170 aa1.73□□□□□ -2.13
NUP82YJL061W PMT4P46971 762 aa1.73□□□□□ -2.13
NUP82YJL061W TPC1P53257 314 aa1.73□□□□□ -2.13
NUP82YJL061W VPS20Q04272 221 aa1.73□□□□□ -2.13
NUP82YJL061W YLR297WQ05899 129 aa1.73□□□□□ -2.13
NUP82YJL061W YLR012CQ07927 99 aa1.73□□□□□ -2.13
NUP82YJL061W RTC5Q12108 567 aaKnown RBP1.73□□□□□ -2.13
NUP82YJL061W SKG6P32900 734 aaPredicted RBP1.73□□□□□ -2.13
NUP82YJL061W FRM2P37261 193 aa1.73□□□□□ -2.13
NUP82YJL061W RFT1P38206 574 aaPredicted RBP1.73□□□□□ -2.13
NUP82YJL061W SDS23P53172 527 aa1.73□□□□□ -2.13
NUP82YJL061W HST4P53688 370 aa1.73□□□□□ -2.13
NUP82YJL061W IRC4Q03036 179 aa1.73□□□□□ -2.13
NUP82YJL061W INP1Q03694 420 aa1.73□□□□□ -2.13
NUP82YJL061W CAB5Q03941 241 aa1.73□□□□□ -2.13
NUP82YJL061W CCH1P50077 2039 aa1.73□□□□□ -2.13
NUP82YJL061W CBP2P03874 630 aaPredicted RBP1.72□□□□□ -2.13
NUP82YJL061W SPS100P13130 326 aa1.72□□□□□ -2.13
NUP82YJL061W CYM1P32898 989 aa1.72□□□□□ -2.13
NUP82YJL061W SUR1P33300 382 aa1.72□□□□□ -2.13
NUP82YJL061W BUD2P33314 1104 aa1.72□□□□□ -2.13
NUP82YJL061W RCK1P38622 512 aa1.72□□□□□ -2.13
NUP82YJL061W BDH1P39714 382 aa1.72□□□□□ -2.13
NUP82YJL061W AIM20P40451 204 aa1.72□□□□□ -2.13
NUP82YJL061W YIL054WP40524 105 aa1.72□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms