RNA–Protein interactions for RNA: YIL076W

SEC28, Transcript of Epsilon-COP subunit of the coatomer, yeastyeast

Gene SEC28, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC28YIL076W VPS9P54787 451 aa2.61□□□□□ -1.99
SEC28YIL076W SXM1Q04175 944 aaKnown RBP2.61□□□□□ -1.99
SEC28YIL076W YFH1Q07540 174 aa2.61□□□□□ -1.99
SEC28YIL076W FSH3Q99369 266 aa2.61□□□□□ -1.99
SEC28YIL076W CDC25P04821 1589 aa2.61□□□□□ -1.99
SEC28YIL076W SCH9P11792 824 aaKnown RBP2.6□□□□□ -1.99
SEC28YIL076W CUP2P15315 225 aa2.6□□□□□ -1.99
SEC28YIL076W CPT1P17898 393 aa2.6□□□□□ -1.99
SEC28YIL076W MDL1P33310 695 aa2.6□□□□□ -1.99
SEC28YIL076W SMP3Q04174 516 aa2.6□□□□□ -1.99
SEC28YIL076W GMC1Q04399 608 aa2.6□□□□□ -1.99
SEC28YIL076W LTE1P07866 1435 aa2.59□□□□□ -1.99
SEC28YIL076W PAN1P32521 1480 aa2.59□□□□□ -1.99
SEC28YIL076W GDI1P39958 451 aaKnown RBP2.59□□□□□ -1.99
SEC28YIL076W YNL320WP42840 284 aa2.59□□□□□ -1.99
SEC28YIL076W LSG1P53145 640 aaKnown RBP2.59□□□□□ -1.99
SEC28YIL076W AIM45Q12480 344 aaKnown RBP2.59□□□□□ -1.99
SEC28YIL076W RPA190P10964 1664 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W TY1B-HO13535 1793 aa2.59□□□□□ -2
SEC28YIL076W TY1B-DR5P0C2I2 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-DR6P0C2I3 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-LR2P0C2I5 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-LR3P0C2I6 1755 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W TY1B-PR1P0C2I9 1755 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W TY1B-PR2P0C2J0 1756 aa2.59□□□□□ -2
SEC28YIL076W TY1B-PR3P0C2J1 1755 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W TY1B-JR1P47098 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-ML2Q03434 1755 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W TY1B-ER1Q03612 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-ML1Q04711 1755 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W TY1B-GR2Q12269 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-OLQ12273 1755 aa2.59□□□□□ -2
SEC28YIL076W TY1B-PLQ12414 1755 aaKnown RBP2.59□□□□□ -2
SEC28YIL076W LRP1P38801 184 aaKnown RBP2.58□□□□□ -2
SEC28YIL076W RSC1P53236 928 aa2.58□□□□□ -2
SEC28YIL076W INP1Q03694 420 aa2.58□□□□□ -2
SEC28YIL076W YMR244WQ04018 355 aa2.58□□□□□ -2
SEC28YIL076W RPN8Q08723 338 aaKnown RBP2.58□□□□□ -2
SEC28YIL076W TY2B-BQ12491 1770 aa2.58□□□□□ -2
SEC28YIL076W VPS63O13549 108 aa2.57□□□□□ -2
SEC28YIL076W DAL5P15365 543 aa2.57□□□□□ -2
SEC28YIL076W GRR1P24814 1151 aa2.57□□□□□ -2
SEC28YIL076W PCH2P38126 564 aa2.57□□□□□ -2
SEC28YIL076W HIT1P46973 164 aa2.57□□□□□ -2
SEC28YIL076W MPS2P53159 387 aa2.57□□□□□ -2
SEC28YIL076W CSM3Q04659 317 aa2.57□□□□□ -2
SEC28YIL076W ECM19Q06011 112 aa2.57□□□□□ -2
SEC28YIL076W TAF10Q12030 206 aa2.57□□□□□ -2
SEC28YIL076W DFM1Q12743 341 aaKnown RBP2.57□□□□□ -2
SEC28YIL076W TOP2P06786 1428 aaKnown RBP2.57□□□□□ -2
SEC28YIL076W RKR1Q04781 1562 aa2.57□□□□□ -2
SEC28YIL076W ESC1Q03661 1658 aaKnown RBP2.57□□□□□ -2
SEC28YIL076W YRF1-1P0CX20 1796 aa2.56□□□□□ -2
SEC28YIL076W YRF1-5P0CX21 1796 aa2.56□□□□□ -2
SEC28YIL076W YRF1-8P0CX22 1796 aa2.56□□□□□ -2
SEC28YIL076W TY1B-DR3Q99231 1755 aa2.56□□□□□ -2
SEC28YIL076W RPB9P27999 122 aa2.56□□□□□ -2
SEC28YIL076W IST2P38250 946 aa2.56□□□□□ -2
SEC28YIL076W RRG9P40156 214 aa2.56□□□□□ -2
SEC28YIL076W CKI1P20485 582 aa2.55□□□□□ -2
SEC28YIL076W MKK1P32490 508 aa2.55□□□□□ -2
SEC28YIL076W SDH4P37298 181 aa2.55□□□□□ -2
SEC28YIL076W RPN6Q12377 434 aa2.55□□□□□ -2
SEC28YIL076W MMS22Q06164 1454 aa2.54□□□□□ -2
SEC28YIL076W RPL6BP05739 176 aaKnown RBP2.54□□□□□ -2
SEC28YIL076W ARF2P19146 181 aaKnown RBP2.54□□□□□ -2
SEC28YIL076W PPQ1P32945 549 aa2.54□□□□□ -2
SEC28YIL076W MRPS5P33759 307 aa2.54□□□□□ -2
SEC28YIL076W ZRT3P34240 503 aa2.54□□□□□ -2
SEC28YIL076W YCH1P42937 148 aa2.54□□□□□ -2
SEC28YIL076W ASG7P46993 209 aa2.54□□□□□ -2
SEC28YIL076W RPL6AQ02326 176 aaKnown RBP2.54□□□□□ -2
SEC28YIL076W RRB1Q04225 511 aaKnown RBP2.54□□□□□ -2
SEC28YIL076W PRP46Q12417 451 aaPredicted RBP2.54□□□□□ -2
SEC28YIL076W GEA2P39993 1459 aaKnown RBP2.53□□□□□ -2
SEC28YIL076W TKL2P33315 681 aa2.53□□□□□ -2
SEC28YIL076W YSW1P38280 609 aa2.53□□□□□ -2
SEC28YIL076W SEC28P40509 296 aaKnown RBP2.53□□□□□ -2
SEC28YIL076W NAT4Q04751 285 aa2.53□□□□□ -2
SEC28YIL076W DIB1Q06819 143 aaPredicted RBP2.53□□□□□ -2
SEC28YIL076W APC5Q08683 685 aa2.53□□□□□ -2
SEC28YIL076W YOR012WQ12351 137 aa2.53□□□□□ -2
SEC28YIL076W TFB5Q3E7C1 72 aaPredicted RBP2.53□□□□□ -2
SEC28YIL076W TY1B-JR2P47100 1755 aaKnown RBP2.53□□□□□ -2
SEC28YIL076W TY1B-ER2Q03619 1755 aa2.53□□□□□ -2
SEC28YIL076W TY1B-MR1Q04214 1755 aa2.53□□□□□ -2
SEC28YIL076W TY1B-MR2Q04670 1755 aaKnown RBP2.53□□□□□ -2
SEC28YIL076W TY1B-LR1Q12088 1755 aaKnown RBP2.53□□□□□ -2
SEC28YIL076W TY1B-NL1Q12112 1755 aa2.53□□□□□ -2
SEC28YIL076W TY1B-GR1Q12141 1755 aa2.53□□□□□ -2
SEC28YIL076W TY1B-BLQ12490 1755 aa2.53□□□□□ -2
SEC28YIL076W MMS1Q06211 1407 aa2.52□□□□□ -2.01
SEC28YIL076W MXR2P25566 168 aa2.52□□□□□ -2.01
SEC28YIL076W FAA1P30624 700 aaKnown RBP2.52□□□□□ -2.01
SEC28YIL076W UTR5P32630 166 aa2.52□□□□□ -2.01
SEC28YIL076W ALK2P32789 676 aaPredicted RBP2.52□□□□□ -2.01
SEC28YIL076W ECM14P38836 430 aa2.52□□□□□ -2.01
SEC28YIL076W YNR068CP53754 272 aa2.52□□□□□ -2.01
SEC28YIL076W POL1P13382 1468 aa2.52□□□□□ -2.01
SEC28YIL076W MAS1P10507 462 aa2.51□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 109.3 ms