RNA–Protein interactions for RNA: YGR261C

APL6, Transcript of Beta3-like subunit of the yeast AP-3 complex, yeast

Gene APL6, Length 2,430 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL6	YGR261C	TSA1	P34760	196 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	GMH1	P36125	273 aa		4.58	□□□□□ -1.68
APL6	YGR261C	YHR078W	P38799	552 aa		4.58	□□□□□ -1.68
APL6	YGR261C	UIP3	P39547	235 aa		4.58	□□□□□ -1.68
APL6	YGR261C	RBG1	P39729	369 aa		4.58	□□□□□ -1.68
APL6	YGR261C	YJR011C	P47086	261 aa	Predicted RBP	4.58	□□□□□ -1.68
APL6	YGR261C	ADO1	P47143	340 aa	Known RBP	4.58	□□□□□ -1.68
APL6	YGR261C	YMR087W	Q04299	284 aa		4.58	□□□□□ -1.68
APL6	YGR261C	MLH3	Q12083	715 aa		4.58	□□□□□ -1.68
APL6	YGR261C	TPO4	Q12256	659 aa		4.58	□□□□□ -1.68
APL6	YGR261C	ADE4	P04046	510 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	SPS4	P09937	338 aa		4.57	□□□□□ -1.68
APL6	YGR261C	YMR085W	P0CF18	432 aa		4.57	□□□□□ -1.68
APL6	YGR261C	ZWF1	P11412	505 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	SNF5	P18480	905 aa		4.57	□□□□□ -1.68
APL6	YGR261C	HCM1	P25364	564 aa		4.57	□□□□□ -1.68
APL6	YGR261C	NRP1	P32770	719 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
APL6	YGR261C	MRPL16	P38064	232 aa		4.57	□□□□□ -1.68
APL6	YGR261C	BNA4	P38169	460 aa		4.57	□□□□□ -1.68
APL6	YGR261C	POP4	P38336	279 aa		4.57	□□□□□ -1.68
APL6	YGR261C	COX15	P40086	486 aa		4.57	□□□□□ -1.68
APL6	YGR261C	MSO1	P53604	210 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	YMR178W	Q03219	274 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	PUS5	Q06244	254 aa		4.57	□□□□□ -1.68
APL6	YGR261C	CYK3	Q07533	885 aa		4.57	□□□□□ -1.68
APL6	YGR261C	ZEO1	Q08245	113 aa		4.57	□□□□□ -1.68
APL6	YGR261C	YDR018C	Q12185	396 aa		4.57	□□□□□ -1.68
APL6	YGR261C	AI3	P03877	415 aa		4.57	□□□□□ -1.68
APL6	YGR261C	PPR1	P07272	904 aa	Predicted RBP	4.57	□□□□□ -1.68
APL6	YGR261C	RIP1	P08067	215 aa		4.57	□□□□□ -1.68
APL6	YGR261C	MRP1	P10662	321 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	RPS1B	P23248	255 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	PUP3	P25451	205 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	CYS4	P32582	507 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	GPI14	P47088	403 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	KTR5	P53966	522 aa	Predicted RBP	4.57	□□□□□ -1.68
APL6	YGR261C	ERG13	P54839	491 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	SAE3	P89114	91 aa		4.57	□□□□□ -1.68
APL6	YGR261C	YMR315W	Q04869	349 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	ASM4	Q05166	528 aa		4.57	□□□□□ -1.68
APL6	YGR261C	LDS2	Q08218	356 aa		4.57	□□□□□ -1.68
APL6	YGR261C	YOR387C	Q08910	206 aa		4.57	□□□□□ -1.68
APL6	YGR261C	NUP157	P40064	1391 aa	Known RBP	4.57	□□□□□ -1.68
APL6	YGR261C	CDC7	P06243	507 aa		4.56	□□□□□ -1.68
APL6	YGR261C	PYC1	P11154	1178 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	RPB8	P20436	146 aa		4.56	□□□□□ -1.68
APL6	YGR261C	GAC1	P28006	793 aa		4.56	□□□□□ -1.68
APL6	YGR261C	DHH1	P39517	506 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	PAC11	P40960	533 aa		4.56	□□□□□ -1.68
APL6	YGR261C	PSA1	P41940	361 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	SLG1	P54867	378 aa		4.56	□□□□□ -1.68
APL6	YGR261C	TIM8	P57744	87 aa		4.56	□□□□□ -1.68
APL6	YGR261C	AIM34	Q03673	198 aa		4.56	□□□□□ -1.68
APL6	YGR261C	SEC13	Q04491	297 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	ALE1	Q08548	619 aa		4.56	□□□□□ -1.68
APL6	YGR261C	TY1A-DR3	Q12441	440 aa		4.56	□□□□□ -1.68
APL6	YGR261C	MRX4	Q12467	430 aa		4.56	□□□□□ -1.68
APL6	YGR261C	YGL041W-A	P0C5N3	154 aa		4.56	□□□□□ -1.68
APL6	YGR261C	GRX2	P17695	143 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	RNA14	P25298	677 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	MSK1	P32048	576 aa		4.56	□□□□□ -1.68
APL6	YGR261C	YKR041W	P36134	250 aa		4.56	□□□□□ -1.68
APL6	YGR261C	EFM1	P38732	585 aa		4.56	□□□□□ -1.68
APL6	YGR261C	NVJ1	P38881	321 aa		4.56	□□□□□ -1.68
APL6	YGR261C	AIR1	P40507	360 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	ASI2	P53895	289 aa		4.56	□□□□□ -1.68
APL6	YGR261C	DID2	P69771	204 aa		4.56	□□□□□ -1.68
APL6	YGR261C	YDR476C	Q03362	224 aa		4.56	□□□□□ -1.68
APL6	YGR261C	NHP10	Q03435	203 aa		4.56	□□□□□ -1.68
APL6	YGR261C	COQ9	Q05779	260 aa		4.56	□□□□□ -1.68
APL6	YGR261C	NOC4	Q06512	552 aa	Predicted RBP	4.56	□□□□□ -1.68
APL6	YGR261C	BER1	Q06688	274 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	SNU23	Q12368	194 aa	Predicted RBP	4.56	□□□□□ -1.68
APL6	YGR261C	EFG1	Q3E705	233 aa	Known RBP	4.56	□□□□□ -1.68
APL6	YGR261C	IPP1	P00817	287 aa	Known RBP	4.55	□□□□□ -1.68
APL6	YGR261C	YPK1	P12688	680 aa	Known RBP	4.55	□□□□□ -1.68
APL6	YGR261C	TYR1	P20049	452 aa		4.55	□□□□□ -1.68
APL6	YGR261C	SLY1	P22213	666 aa		4.55	□□□□□ -1.68
APL6	YGR261C	CNB1	P25296	175 aa		4.55	□□□□□ -1.68
APL6	YGR261C	YCR102C	P25608	368 aa		4.55	□□□□□ -1.68
APL6	YGR261C	RPC19	P28000	142 aa	Known RBP	4.55	□□□□□ -1.68
APL6	YGR261C	GAT1	P43574	510 aa		4.55	□□□□□ -1.68
APL6	YGR261C	CTK3	P46963	296 aa	Predicted RBP	4.55	□□□□□ -1.68
APL6	YGR261C	NBP1	P52919	319 aa	Predicted RBP	4.55	□□□□□ -1.68
APL6	YGR261C	VEL1	P53058	206 aa		4.55	□□□□□ -1.68
APL6	YGR261C	PEX31	P53203	462 aa		4.55	□□□□□ -1.68
APL6	YGR261C	YGR017W	P53210	297 aa		4.55	□□□□□ -1.68
APL6	YGR261C	YGR168C	P53293	376 aa		4.55	□□□□□ -1.68
APL6	YGR261C	COS1	P53822	381 aa		4.55	□□□□□ -1.68
APL6	YGR261C	IBD2	P53892	351 aa		4.55	□□□□□ -1.68
APL6	YGR261C	GIP3	Q03016	1276 aa		4.55	□□□□□ -1.68
APL6	YGR261C	YML096W	Q04489	525 aa		4.55	□□□□□ -1.68
APL6	YGR261C	YLR046C	Q12253	270 aa		4.55	□□□□□ -1.68
APL6	YGR261C	TRM13	Q12383	476 aa		4.55	□□□□□ -1.68
APL6	YGR261C	DCN1	Q12395	269 aa		4.55	□□□□□ -1.68
APL6	YGR261C	PSF1	Q12488	208 aa		4.55	□□□□□ -1.68
APL6	YGR261C	FOL3	Q12676	427 aa	Predicted RBP	4.55	□□□□□ -1.68
APL6	YGR261C	RIB3	Q99258	208 aa		4.55	□□□□□ -1.68
APL6	YGR261C	CDC4	P07834	779 aa		4.55	□□□□□ -1.68
APL6	YGR261C	SUA7	P29055	345 aa	Predicted RBP	4.55	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 22 ms