RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C COX15P40086 486 aa2.99□□□□□ -1.93
XRN1YGL173C ERG10P41338 398 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C YMR166CQ03829 368 aa2.99□□□□□ -1.93
XRN1YGL173C DCN1Q12395 269 aa2.99□□□□□ -1.93
XRN1YGL173C MRPL23Q12487 163 aaPredicted RBP2.99□□□□□ -1.93
XRN1YGL173C LAM4P38800 1345 aa2.99□□□□□ -1.93
XRN1YGL173C THP2O13539 261 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C ELF1P36053 145 aa2.99□□□□□ -1.93
XRN1YGL173C LST7P53237 242 aa2.99□□□□□ -1.93
XRN1YGL173C YMR187CQ03236 431 aa2.99□□□□□ -1.93
XRN1YGL173C INM2Q05533 292 aa2.99□□□□□ -1.93
XRN1YGL173C SEC10Q06245 871 aa2.99□□□□□ -1.93
XRN1YGL173C TIR4Q12218 487 aaPredicted RBP2.99□□□□□ -1.93
XRN1YGL173C RPL18AP0CX49 186 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C RPL18BP0CX50 186 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C SNA3P14359 133 aa2.99□□□□□ -1.93
XRN1YGL173C PPH22P23595 377 aa2.99□□□□□ -1.93
XRN1YGL173C RNA14P25298 677 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C PDC2P32896 925 aa2.99□□□□□ -1.93
XRN1YGL173C KKQ8P36004 724 aa2.99□□□□□ -1.93
XRN1YGL173C YKL162CP36052 402 aa2.99□□□□□ -1.93
XRN1YGL173C LYS1P38998 373 aaRIP-Chip data2.99□□□□□ -1.93not detected
XRN1YGL173C UFE1P41834 346 aa2.99□□□□□ -1.93
XRN1YGL173C UBC13P52490 153 aa2.99□□□□□ -1.93
XRN1YGL173C ROG1P53118 685 aa2.99□□□□□ -1.93
XRN1YGL173C COS6P53344 381 aa2.99□□□□□ -1.93
XRN1YGL173C YMR114CQ04471 368 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C COX20Q04935 205 aa2.99□□□□□ -1.93
XRN1YGL173C YEH2Q07950 538 aa2.99□□□□□ -1.93
XRN1YGL173C IRC10Q08118 586 aa2.99□□□□□ -1.93
XRN1YGL173C AHA1Q12449 350 aaKnown RBP2.99□□□□□ -1.93
XRN1YGL173C SWI1P09547 1314 aa2.99□□□□□ -1.93
XRN1YGL173C CYC7P00045 113 aa2.98□□□□□ -1.93
XRN1YGL173C HEM2P05373 342 aa2.98□□□□□ -1.93
XRN1YGL173C SPO23P33757 523 aa2.98□□□□□ -1.93
XRN1YGL173C ECM15P35195 104 aa2.98□□□□□ -1.93
XRN1YGL173C YKR073CP36153 106 aa2.98□□□□□ -1.93
XRN1YGL173C SHG1P38337 142 aa2.98□□□□□ -1.93
XRN1YGL173C RTC3P38804 111 aaPredicted RBP2.98□□□□□ -1.93
XRN1YGL173C PFS1P38872 237 aa2.98□□□□□ -1.93
XRN1YGL173C SWC4P53201 476 aa2.98□□□□□ -1.93
XRN1YGL173C TRM112P53738 135 aaPredicted RBP2.98□□□□□ -1.93
XRN1YGL173C COS1P53822 381 aa2.98□□□□□ -1.93
XRN1YGL173C RNY1Q02933 434 aaKnown RBP2.98□□□□□ -1.93
XRN1YGL173C VBA1Q04301 562 aa2.98□□□□□ -1.93
XRN1YGL173C SSK1Q07084 712 aa2.98□□□□□ -1.93
XRN1YGL173C SIL1Q08199 421 aa2.98□□□□□ -1.93
XRN1YGL173C STE2D6VTK4 431 aa2.98□□□□□ -1.93
XRN1YGL173C YPK1P12688 680 aaKnown RBP2.98□□□□□ -1.93
XRN1YGL173C CBS2P14905 389 aa2.98□□□□□ -1.93
XRN1YGL173C SKN1P33336 771 aa2.98□□□□□ -1.93
XRN1YGL173C SLI1P53304 468 aa2.98□□□□□ -1.93
XRN1YGL173C YNR014WP53719 212 aa2.98□□□□□ -1.93
XRN1YGL173C OCA2P53949 197 aa2.98□□□□□ -1.93
XRN1YGL173C NUP100Q02629 959 aa2.98□□□□□ -1.93
XRN1YGL173C YPR091CQ06833 770 aa2.98□□□□□ -1.93
XRN1YGL173C YLR111WQ12528 110 aa2.98□□□□□ -1.93
XRN1YGL173C YDL085C-AQ3E7B7 68 aaKnown RBP2.98□□□□□ -1.93
XRN1YGL173C RAD1P06777 1100 aa2.98□□□□□ -1.93
XRN1YGL173C UTR1P21373 530 aa2.98□□□□□ -1.93
XRN1YGL173C ALK2P32789 676 aaPredicted RBP2.98□□□□□ -1.93
XRN1YGL173C LIP5P32875 414 aa2.98□□□□□ -1.93
XRN1YGL173C YEL020CP39994 560 aa2.98□□□□□ -1.93
XRN1YGL173C POG1P40473 351 aa2.98□□□□□ -1.93
XRN1YGL173C DIM1P41819 318 aaKnown RBP2.98□□□□□ -1.93
XRN1YGL173C PMT5P52867 743 aa2.98□□□□□ -1.93
XRN1YGL173C YIF1P53845 314 aaKnown RBP2.98□□□□□ -1.93
XRN1YGL173C RSM23Q01163 450 aa2.98□□□□□ -1.93
XRN1YGL173C USV1Q12132 391 aa2.98□□□□□ -1.93
XRN1YGL173C YLL056CQ12177 298 aa2.98□□□□□ -1.93
XRN1YGL173C TIP41Q12199 356 aa2.98□□□□□ -1.93
XRN1YGL173C EMP46Q12396 444 aa2.98□□□□□ -1.93
XRN1YGL173C FOL3Q12676 427 aaPredicted RBP2.98□□□□□ -1.93
XRN1YGL173C IZH4Q99393 312 aa2.98□□□□□ -1.93
XRN1YGL173C MRPS28P21771 286 aa2.98□□□□□ -1.93
XRN1YGL173C PHA2P32452 334 aa2.98□□□□□ -1.93
XRN1YGL173C SIM1P40472 476 aa2.98□□□□□ -1.93
XRN1YGL173C HXT9P40885 567 aa2.98□□□□□ -1.93
XRN1YGL173C YJR149WP47177 404 aa2.98□□□□□ -1.93
XRN1YGL173C NBP35P52920 328 aa2.98□□□□□ -1.93
XRN1YGL173C YIP1P53039 248 aa2.98□□□□□ -1.93
XRN1YGL173C SSU72P53538 206 aaPredicted RBP2.98□□□□□ -1.93
XRN1YGL173C TIM44Q01852 431 aa2.98□□□□□ -1.93
XRN1YGL173C RSC9Q03124 581 aa2.98□□□□□ -1.93
XRN1YGL173C YPL199CQ08954 240 aa2.98□□□□□ -1.93
XRN1YGL173C MSL5Q12186 476 aaKnown RBP RIP-Chip data2.98□□□□□ -1.93not detected
XRN1YGL173C RPL27AP0C2H6 136 aaKnown RBP2.97□□□□□ -1.93
XRN1YGL173C RPL27BP0C2H7 136 aaKnown RBP2.97□□□□□ -1.93
XRN1YGL173C DEP1P31385 405 aa2.97□□□□□ -1.93
XRN1YGL173C YHR177WP38867 453 aa2.97□□□□□ -1.93
XRN1YGL173C BNA6P43619 295 aa2.97□□□□□ -1.93
XRN1YGL173C YPR003CP53394 754 aa2.97□□□□□ -1.93
XRN1YGL173C ARK1P53974 638 aa2.97□□□□□ -1.93
XRN1YGL173C RRP17Q04031 235 aaPredicted RBP2.97□□□□□ -1.93
XRN1YGL173C STP3Q05937 343 aa2.97□□□□□ -1.93
XRN1YGL173C YAP7Q08182 245 aa2.97□□□□□ -1.93
XRN1YGL173C REX4Q08237 289 aa2.97□□□□□ -1.93
XRN1YGL173C THI72Q08579 599 aa2.97□□□□□ -1.93
XRN1YGL173C YLR049CQ12110 428 aa2.97□□□□□ -1.93
XRN1YGL173C ATP1P07251 545 aaKnown RBP2.97□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms