RNA–Protein interactions for RNA: YFR055W

IRC7, Transcript of Beta-lyase involved in the production of thiols, yeast

Gene IRC7, Length 1,023 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IRC7	YFR055W	INP53	Q12271	1107 aa		5.25	□□□□□ -1.57
IRC7	YFR055W	REP1	P03871	373 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	STE7	P06784	515 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	PET111	P08468	800 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	ARF1	P11076	181 aa	Known RBP	5.24	□□□□□ -1.57
IRC7	YFR055W	PHO13	P19881	312 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	GSH1	P32477	678 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	SSE2	P32590	693 aa	Known RBP	5.24	□□□□□ -1.57
IRC7	YFR055W	MSN2	P33748	704 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	MTC4	P38335	694 aa	Known RBP	5.24	□□□□□ -1.57
IRC7	YFR055W	AST2	P39945	430 aa	Known RBP	5.24	□□□□□ -1.57
IRC7	YFR055W	ALG5	P40350	334 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	ERB1	Q04660	807 aa	Known RBP	5.24	□□□□□ -1.57
IRC7	YFR055W	RAD34	Q06665	692 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	YLR036C	Q07986	203 aa		5.24	□□□□□ -1.57
IRC7	YFR055W	SLM5	P25345	492 aa	Known RBP	5.23	□□□□□ -1.57
IRC7	YFR055W	HSP150	P32478	413 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
IRC7	YFR055W	MRPL39	P36533	70 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	FAA2	P39518	744 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	YIR020C	P40575	100 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	ABM1	P47146	123 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	IMD4	P50094	524 aa	Known RBP	5.23	□□□□□ -1.57
IRC7	YFR055W	SHY1	P53266	389 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	NHP10	Q03435	203 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	MRPL1	Q04599	285 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	DPB4	Q04603	196 aa	Known RBP	5.23	□□□□□ -1.57
IRC7	YFR055W	SMA2	Q04658	369 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	UBX3	Q12229	455 aa		5.23	□□□□□ -1.57
IRC7	YFR055W	RUD3	Q12234	484 aa	Known RBP	5.23	□□□□□ -1.57
IRC7	YFR055W	KGD1	P20967	1014 aa	Known RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	AAD3	P25612	363 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	SSE1	P32589	693 aa	Known RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	PTM1	P32857	523 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	TIF3	P34167	436 aa	Known RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	YBR220C	P38318	560 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	JEM1	P40358	645 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	TFG2	P41896	400 aa	Predicted RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	FAR3	P46671	204 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	GCD14	P46959	383 aa	Predicted RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	NMD5	P46970	1048 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	SBH2	P52871	88 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	TWF1	P53250	332 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	CIK1	Q01649	594 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	YDR249C	Q03787	373 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	PAL1	Q05518	499 aa	Known RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	ARO10	Q06408	635 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	COS7	Q07788	383 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	ULA1	Q12059	462 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	RLM1	Q12224	676 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	RDL1	Q12305	139 aa	Known RBP	5.22	□□□□□ -1.57
IRC7	YFR055W	PSF1	Q12488	208 aa		5.22	□□□□□ -1.57
IRC7	YFR055W	SPO7	P18410	259 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	RPB4	P20433	221 aa	Predicted RBP	5.21	□□□□□ -1.58
IRC7	YFR055W	RAD51	P25454	400 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	ITR1	P30605	584 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	ITR2	P30606	609 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	YBR144C	P34215	104 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	CMC1	P36064	111 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	IDP2	P41939	412 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	MRK1	P50873	501 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	TPC1	P53257	314 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	YNL058C	P53947	316 aa		5.21	□□□□□ -1.58
IRC7	YFR055W	MRP2	P10663	115 aa	Predicted RBP	5.2	□□□□□ -1.58
IRC7	YFR055W	MRP13	P12686	339 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	CTA1	P15202	515 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	MRE11	P32829	692 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	RPC34	P32910	317 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	YIL029C	P40538	142 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	NCA3	P46955	337 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	OGG1	P53397	376 aa	Predicted RBP	5.2	□□□□□ -1.58
IRC7	YFR055W	FIN1	Q03898	291 aa		5.2	□□□□□ -1.58
IRC7	YFR055W	GPH1	P06738	902 aa	Known RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	AQY1	P0CD91	305 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	ART10	P18634	518 aa	Known RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	STE50	P25344	346 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	YCR051W	P25631	222 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	PAP1	P29468	568 aa	Known RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	HXT1	P32465	570 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	RPT5	P33297	434 aa	Known RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	POP4	P38336	279 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	MSG5	P38590	489 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	YRB1	P41920	201 aa	Known RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	HXT14	P42833	540 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	PTR3	P43606	678 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	SAE2	P46946	345 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	APT1	P49435	187 aa	Known RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	HOS2	P53096	452 aa	Predicted RBP	5.19	□□□□□ -1.58
IRC7	YFR055W	PRM15	Q03262	622 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	BUR2	Q05949	395 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	RTR2	Q12378	196 aa		5.19	□□□□□ -1.58
IRC7	YFR055W	RPN13	O13563	156 aa		5.18	□□□□□ -1.58
IRC7	YFR055W	TFS1	P14306	219 aa		5.18	□□□□□ -1.58
IRC7	YFR055W	MDH2	P22133	377 aa		5.18	□□□□□ -1.58
IRC7	YFR055W	MGT1	P26188	188 aa		5.18	□□□□□ -1.58
IRC7	YFR055W	RPC37	P36121	282 aa		5.18	□□□□□ -1.58
IRC7	YFR055W	MTC6	P38849	526 aa		5.18	□□□□□ -1.58
IRC7	YFR055W	SEC28	P40509	296 aa	Known RBP	5.18	□□□□□ -1.58
IRC7	YFR055W	CAK1	P43568	368 aa	Predicted RBP	5.18	□□□□□ -1.58
IRC7	YFR055W	MSC1	Q03104	513 aa		5.18	□□□□□ -1.58

Retrieved 100 of 5,963 RNA–protein pairs in 54.5 ms