RNA–Protein interactions for RNA: YER012W

PRE1, Transcript of Beta 4 subunit of the 20S proteasome, yeastyeast

Gene PRE1, Length 597 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE1YER012W YIF1P53845 314 aaKnown RBP2.57□□□□□ -2
PRE1YER012W DSL1P53847 754 aa2.57□□□□□ -2
PRE1YER012W YNL143CP53908 130 aa2.57□□□□□ -2
PRE1YER012W KAP120Q02932 1032 aa2.57□□□□□ -2
PRE1YER012W EMI1Q04406 187 aa2.57□□□□□ -2
PRE1YER012W PGC1Q08959 321 aa2.57□□□□□ -2
PRE1YER012W VPS68Q12016 184 aa2.57□□□□□ -2
PRE1YER012W GLE1Q12315 538 aa2.57□□□□□ -2
PRE1YER012W YRM1Q12340 786 aa2.57□□□□□ -2
PRE1YER012W YBL111CQ3E7Y5 667 aa2.57□□□□□ -2
PRE1YER012W RHO2P06781 192 aa2.56□□□□□ -2
PRE1YER012W UBA1P22515 1024 aaKnown RBP2.56□□□□□ -2
PRE1YER012W RPI1P23250 407 aaKnown RBP2.56□□□□□ -2
PRE1YER012W APE2P32454 952 aaKnown RBP2.56□□□□□ -2
PRE1YER012W CSE1P33307 960 aa2.56□□□□□ -2
PRE1YER012W KKQ8P36004 724 aa2.56□□□□□ -2
PRE1YER012W SOL2P37262 315 aa2.56□□□□□ -2
PRE1YER012W LRP1P38801 184 aaKnown RBP2.56□□□□□ -2
PRE1YER012W CYC2P38909 366 aa2.56□□□□□ -2
PRE1YER012W YEL073CP39974 107 aa2.56□□□□□ -2
PRE1YER012W SER3P40054 469 aa2.56□□□□□ -2
PRE1YER012W UTP18P40362 594 aaPredicted RBP2.56□□□□□ -2
PRE1YER012W GAB1P41733 394 aa2.56□□□□□ -2
PRE1YER012W KAP114P53067 1004 aa2.56□□□□□ -2
PRE1YER012W VPS9P54787 451 aa2.56□□□□□ -2
PRE1YER012W ENT5Q03769 411 aaKnown RBP2.56□□□□□ -2
PRE1YER012W IRC25Q07951 179 aa2.56□□□□□ -2
PRE1YER012W LDB17Q12342 491 aa2.56□□□□□ -2
PRE1YER012W YOR338WQ99326 363 aa2.56□□□□□ -2
PRE1YER012W FAS1P07149 2051 aaKnown RBP2.56□□□□□ -2
PRE1YER012W YKR104WP0CE69 306 aa2.55□□□□□ -2
PRE1YER012W CBF1P17106 351 aa2.55□□□□□ -2
PRE1YER012W MDH1P17505 334 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
PRE1YER012W URA4P20051 364 aa2.55□□□□□ -2
PRE1YER012W SCL1P21243 252 aaKnown RBP2.55□□□□□ -2
PRE1YER012W EPT1P22140 391 aa2.55□□□□□ -2
PRE1YER012W CPR2P23285 205 aa2.55□□□□□ -2
PRE1YER012W YCR099CP25657 155 aa2.55□□□□□ -2
PRE1YER012W BEM1P29366 551 aa2.55□□□□□ -2
PRE1YER012W HIR2P32480 875 aa2.55□□□□□ -2
PRE1YER012W SPS19P32573 292 aaKnown RBP2.55□□□□□ -2
PRE1YER012W BLI1P35727 113 aa2.55□□□□□ -2
PRE1YER012W ARA1P38115 344 aa2.55□□□□□ -2
PRE1YER012W SLM4P38247 162 aa2.55□□□□□ -2
PRE1YER012W NTC20P38302 140 aaPredicted RBP2.55□□□□□ -2
PRE1YER012W VHC1P38329 1120 aa2.55□□□□□ -2
PRE1YER012W RCK2P38623 610 aa2.55□□□□□ -2
PRE1YER012W AIM10P39965 576 aaKnown RBP2.55□□□□□ -2
PRE1YER012W DSN1P40568 576 aa2.55□□□□□ -2
PRE1YER012W TFG2P41896 400 aaPredicted RBP2.55□□□□□ -2
PRE1YER012W CAK1P43568 368 aaPredicted RBP2.55□□□□□ -2
PRE1YER012W RMD9P53140 646 aaKnown RBP2.55□□□□□ -2
PRE1YER012W SLH1P53327 1967 aaKnown RBP2.55□□□□□ -2
PRE1YER012W OAZ1Q02803 292 aa2.55□□□□□ -2
PRE1YER012W YMR181CQ03231 154 aa2.55□□□□□ -2
PRE1YER012W ACL4Q03771 387 aa2.55□□□□□ -2
PRE1YER012W YMR114CQ04471 368 aaKnown RBP2.55□□□□□ -2
PRE1YER012W RRP45Q05636 305 aaKnown RBP2.55□□□□□ -2
PRE1YER012W MDM30Q05930 598 aa2.55□□□□□ -2
PRE1YER012W COS7Q07788 383 aa2.55□□□□□ -2
PRE1YER012W YPL278CQ08990 100 aa2.55□□□□□ -2
PRE1YER012W DAS2Q12084 232 aa2.55□□□□□ -2
PRE1YER012W VAM3Q12241 283 aa2.55□□□□□ -2
PRE1YER012W YDR061WQ12298 539 aa2.55□□□□□ -2
PRE1YER012W PST1Q12355 444 aa2.55□□□□□ -2
PRE1YER012W PAR32Q12515 295 aaKnown RBP2.55□□□□□ -2
PRE1YER012W SEY1Q99287 776 aa2.55□□□□□ -2
PRE1YER012W GPH1P06738 902 aaKnown RBP2.54□□□□□ -2
PRE1YER012W RAD1P06777 1100 aa2.54□□□□□ -2
PRE1YER012W SRV2P17555 526 aaKnown RBP2.54□□□□□ -2
PRE1YER012W TPS2P31688 896 aaKnown RBP2.54□□□□□ -2
PRE1YER012W IMP3P32899 183 aaPredicted RBP2.54□□□□□ -2
PRE1YER012W PEX5P35056 612 aa2.54□□□□□ -2
PRE1YER012W EBP2P36049 427 aaKnown RBP2.54□□□□□ -2
PRE1YER012W SMC2P38989 1170 aaKnown RBP2.54□□□□□ -2
PRE1YER012W LYS1P38998 373 aaRIP-Chip data2.54□□□□□ -2not detected
PRE1YER012W YAL037WP39728 267 aa2.54□□□□□ -2
PRE1YER012W RPS0BP46654 252 aaKnown RBP2.54□□□□□ -2
PRE1YER012W CDC14Q00684 551 aa2.54□□□□□ -2
PRE1YER012W CIK1Q01649 594 aa2.54□□□□□ -2
PRE1YER012W SKO1Q02100 647 aa2.54□□□□□ -2
PRE1YER012W LDB18Q07887 179 aa2.54□□□□□ -2
PRE1YER012W PLB3Q08108 686 aa2.54□□□□□ -2
PRE1YER012W NSP1P14907 823 aaKnown RBP2.53□□□□□ -2
PRE1YER012W RHB1P25378 209 aa2.53□□□□□ -2
PRE1YER012W SIN4P32259 974 aa2.53□□□□□ -2
PRE1YER012W MEI5P32489 222 aa2.53□□□□□ -2
PRE1YER012W PRP21P32524 280 aaPredicted RBP2.53□□□□□ -2
PRE1YER012W CDC13P32797 924 aaKnown RBP2.53□□□□□ -2
PRE1YER012W RAD5P32849 1169 aaPredicted RBP2.53□□□□□ -2
PRE1YER012W SKN1P33336 771 aa2.53□□□□□ -2
PRE1YER012W MRPL37P36532 105 aa2.53□□□□□ -2
PRE1YER012W LDB7P38210 180 aa2.53□□□□□ -2
PRE1YER012W MMS21P38632 267 aa2.53□□□□□ -2
PRE1YER012W YHI9P38765 294 aa2.53□□□□□ -2
PRE1YER012W YHR182WP38870 785 aa2.53□□□□□ -2
PRE1YER012W MIG3P39943 394 aa2.53□□□□□ -2
PRE1YER012W YMR134WP40207 237 aa2.53□□□□□ -2
PRE1YER012W SAS2P40963 338 aa2.53□□□□□ -2
PRE1YER012W ECM27P47144 725 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 89.8 ms