RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C MNL1P38888 796 aa0.78□□□□□ -2.28
SSS1YDR086C ASP1P38986 381 aaPredicted RBP0.78□□□□□ -2.28
SSS1YDR086C SYF2P53277 215 aaPredicted RBP0.78□□□□□ -2.28
SSS1YDR086C CGI121Q03705 181 aaKnown RBP0.78□□□□□ -2.28
SSS1YDR086C YMR244WQ04018 355 aa0.78□□□□□ -2.28
SSS1YDR086C TRM10Q12400 293 aa0.78□□□□□ -2.28
SSS1YDR086C DET1Q99288 334 aaKnown RBP0.78□□□□□ -2.28
SSS1YDR086C YBL028CP38202 106 aa0.77□□□□□ -2.29
SSS1YDR086C SRP72P38688 640 aaKnown RBP0.77□□□□□ -2.29
SSS1YDR086C YHR177WP38867 453 aa0.77□□□□□ -2.29
SSS1YDR086C FMP48P53233 369 aa0.77□□□□□ -2.29
SSS1YDR086C RET3P53600 189 aa0.77□□□□□ -2.29
SSS1YDR086C YNL040WP53960 456 aaPredicted RBP0.77□□□□□ -2.29
SSS1YDR086C MEH1Q02205 184 aa0.77□□□□□ -2.29
SSS1YDR086C SPH1Q06160 661 aa0.77□□□□□ -2.29
SSS1YDR086C YOL075CQ08234 1294 aa0.77□□□□□ -2.29
SSS1YDR086C YOL163WP0CF20 169 aa0.76□□□□□ -2.29
SSS1YDR086C DAP2P18962 818 aa0.76□□□□□ -2.29
SSS1YDR086C FAR1P21268 830 aa0.76□□□□□ -2.29
SSS1YDR086C RPC53P25441 422 aa0.76□□□□□ -2.29
SSS1YDR086C RPN12P32496 274 aa0.76□□□□□ -2.29
SSS1YDR086C YEL043WP32618 956 aa0.76□□□□□ -2.29
SSS1YDR086C CAB3P36076 571 aa0.76□□□□□ -2.29
SSS1YDR086C JNM1P36224 373 aa0.76□□□□□ -2.29
SSS1YDR086C SPP381P38282 291 aaPredicted RBP0.76□□□□□ -2.29
SSS1YDR086C YER084WP40057 128 aa0.76□□□□□ -2.29
SSS1YDR086C LCP5P40079 357 aaPredicted RBP0.76□□□□□ -2.29
SSS1YDR086C BUD27P43573 796 aaKnown RBP RIP-Chip data0.76□□□□□ -2.29not detected
SSS1YDR086C LST7P53237 242 aa0.76□□□□□ -2.29
SSS1YDR086C AQR1P53943 586 aa0.76□□□□□ -2.29
SSS1YDR086C TAF10Q12030 206 aa0.76□□□□□ -2.29
SSS1YDR086C TY3A-GQ12173 290 aa0.76□□□□□ -2.29
SSS1YDR086C RPN5Q12250 445 aaKnown RBP0.76□□□□□ -2.29
SSS1YDR086C TFC7Q12415 435 aa0.76□□□□□ -2.29
SSS1YDR086C TY3A-IQ99219 290 aa0.76□□□□□ -2.29
SSS1YDR086C PHO80P20052 293 aa0.75□□□□□ -2.29
SSS1YDR086C MSK1P32048 576 aa0.75□□□□□ -2.29
SSS1YDR086C NAB3P38996 802 aaKnown RBP RIP-Chip data0.75□□□□□ -2.29not detected
SSS1YDR086C POP2P39008 433 aa0.75□□□□□ -2.29
SSS1YDR086C SDS23P53172 527 aa0.75□□□□□ -2.29
SSS1YDR086C CIK1Q01649 594 aa0.75□□□□□ -2.29
SSS1YDR086C SPC19Q03954 165 aa0.75□□□□□ -2.29
SSS1YDR086C ERP3Q12403 225 aa0.75□□□□□ -2.29
SSS1YDR086C ISA2Q12425 185 aa0.75□□□□□ -2.29
SSS1YDR086C MHP1P43638 1398 aa0.74□□□□□ -2.29
SSS1YDR086C NRG2P38082 220 aa0.74□□□□□ -2.29
SSS1YDR086C LCB2P40970 561 aa0.74□□□□□ -2.29
SSS1YDR086C LSG1P53145 640 aaKnown RBP0.74□□□□□ -2.29
SSS1YDR086C ACT1P60010 375 aaKnown RBP0.74□□□□□ -2.29
SSS1YDR086C BUD21Q08492 214 aaPredicted RBP0.74□□□□□ -2.29
SSS1YDR086C TIM22Q12328 207 aa0.74□□□□□ -2.29
SSS1YDR086C YAK1P14680 807 aa0.73□□□□□ -2.29
SSS1YDR086C ARF2P19146 181 aaKnown RBP0.73□□□□□ -2.29
SSS1YDR086C VPH2P32341 215 aa0.73□□□□□ -2.29
SSS1YDR086C MLH1P38920 769 aa0.73□□□□□ -2.29
SSS1YDR086C EDC2P40023 145 aaPredicted RBP0.73□□□□□ -2.29
SSS1YDR086C DSE1P40077 573 aa0.73□□□□□ -2.29
SSS1YDR086C EPL1P43572 832 aa0.73□□□□□ -2.29
SSS1YDR086C PMT4P46971 762 aa0.73□□□□□ -2.29
SSS1YDR086C UBX2Q04228 584 aa0.73□□□□□ -2.29
SSS1YDR086C YPR078CQ06813 372 aa0.73□□□□□ -2.29
SSS1YDR086C DTD1Q07648 150 aaKnown RBP0.73□□□□□ -2.29
SSS1YDR086C GPM3Q12326 303 aa0.73□□□□□ -2.29
SSS1YDR086C VPS1P21576 704 aaKnown RBP0.72□□□□□ -2.29
SSS1YDR086C MRPL20P22354 195 aaPredicted RBP0.72□□□□□ -2.29
SSS1YDR086C RRT12P25381 491 aa0.72□□□□□ -2.29
SSS1YDR086C ERG9P29704 444 aa0.72□□□□□ -2.29
SSS1YDR086C YHL044WP38727 235 aa0.72□□□□□ -2.29
SSS1YDR086C PES4P39684 611 aa0.72□□□□□ -2.29
SSS1YDR086C UFD1P53044 361 aa0.72□□□□□ -2.29
SSS1YDR086C MPS2P53159 387 aa0.72□□□□□ -2.29
SSS1YDR086C SMP3Q04174 516 aa0.72□□□□□ -2.29
SSS1YDR086C PEX27Q08580 376 aa0.72□□□□□ -2.29
SSS1YDR086C APC5Q08683 685 aa0.72□□□□□ -2.29
SSS1YDR086C RPN6Q12377 434 aa0.72□□□□□ -2.29
SSS1YDR086C PFK27Q12471 397 aaPredicted RBP0.72□□□□□ -2.29
SSS1YDR086C FSH3Q99369 266 aa0.72□□□□□ -2.29
SSS1YDR086C RPL26AP05743 127 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C RPL1AP0CX43 217 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C RPL1BP0CX44 217 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C SCO1P23833 295 aa0.71□□□□□ -2.3
SSS1YDR086C DBR1P24309 405 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C PSO2P30620 661 aa0.71□□□□□ -2.3
SSS1YDR086C KTI12P34253 313 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C MPE1P35728 441 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C YER188WP40103 239 aa0.71□□□□□ -2.3
SSS1YDR086C SNL1P40548 159 aa0.71□□□□□ -2.3
SSS1YDR086C DSK2P48510 373 aa0.71□□□□□ -2.3
SSS1YDR086C RPL26BP53221 127 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C TPC1P53257 314 aa0.71□□□□□ -2.3
SSS1YDR086C RSM27P53305 110 aa0.71□□□□□ -2.3
SSS1YDR086C CSM3Q04659 317 aa0.71□□□□□ -2.3
SSS1YDR086C VPS68Q12016 184 aa0.71□□□□□ -2.3
SSS1YDR086C YPL245WQ12179 454 aaKnown RBP0.71□□□□□ -2.3
SSS1YDR086C YOR012WQ12351 137 aa0.71□□□□□ -2.3
SSS1YDR086C PRM4Q12498 284 aa0.71□□□□□ -2.3
SSS1YDR086C CBP2P03874 630 aaPredicted RBP0.7□□□□□ -2.3
SSS1YDR086C TFS1P14306 219 aa0.7□□□□□ -2.3
SSS1YDR086C PRE7P23724 241 aaKnown RBP0.7□□□□□ -2.3
SSS1YDR086C GRR1P24814 1151 aa0.7□□□□□ -2.3
Retrieved 100 of 5,963 RNA–protein pairs in 54.4 ms