RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 GPC5P78333 572 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 SF3B3Q15393 1217 aaKnown RBP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 PDXDC1Q6P996 788 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 APOBEC3FQ8IUX4 373 aaKnown RBP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 NSMCE1Q8WV22 266 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 POMGNT1Q8WZA1 660 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 HNRNPCP07910 306 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 KDM7AQ6ZMT4 941 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 DONSONQ9NYP3 566 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 UBN2Q6ZU65 1347 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 KRT14P02533 472 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 FMR1Q06787 632 aaKnown RBP eCLIP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 LLGL1Q15334 1064 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 FAM160B2Q86V87 743 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 NACC1Q96RE7 527 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 WDR11Q9BZH6 1224 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 DNAJC17Q9NVM6 304 aaKnown RBP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 FBXO2Q9UK22 296 aaPredicted RBP21.06■□□□□ 0.96
SHANK1-203ENST00000391813 SLIT1O75093 1534 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 PFASO15067 1338 aa21.06■□□□□ 0.96
SHANK1-203ENST00000391813 NCF2P19878 526 aaPredicted RBP21.05■□□□□ 0.96
SHANK1-203ENST00000391813 RNF207Q6ZRF8 634 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 TTC17Q96AE7 1141 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 FAM161BQ96MY7 647 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 MRPL46Q9H2W6 279 aaKnown RBP21.05■□□□□ 0.96
SHANK1-203ENST00000391813 PARVGQ9HBI0 331 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 KIF28PB7ZC32 967 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 PRKAB2O43741 272 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 SRGNP10124 158 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 CRKP46108 304 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 KPNA2P52292 529 aaKnown RBP21.05■□□□□ 0.96
SHANK1-203ENST00000391813 ALCAMQ13740 583 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 KRT39Q6A163 491 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 SUGP1Q8IWZ8 645 aaKnown RBP21.05■□□□□ 0.96
SHANK1-203ENST00000391813 NEURL4Q96JN8 1562 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 ZNF185O15231 689 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 BMP3P12645 472 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 ANLNQ9NQW6 1124 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 ZRANB2O95218 330 aaKnown RBP eCLIP21.05■□□□□ 0.96
SHANK1-203ENST00000391813 TNNC2P02585 160 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 PPP2R5CQ13362 524 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 PI16Q6UXB8 463 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 PCGF5Q86SE9 256 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 AMACRQ9UHK6 382 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 LRRC7Q96NW7 1537 aa21.05■□□□□ 0.96
SHANK1-203ENST00000391813 TJP3O95049 919 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 HSPA8P11142 646 aaKnown RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 KCNH2Q12809 1159 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 ALX1Q15699 326 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 LRRC43Q8N309 656 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 SUGCTQ9HAC7 445 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 NOD2Q9HC29 1040 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 DNAJC12Q9UKB3 198 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 PCDHB4Q9Y5E5 795 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 KRT38O76015 456 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 ECE1P42892 770 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 STAT4Q14765 748 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 CCDC92Q53HC0 331 aaPredicted RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 DNAJC24Q6P3W2 148 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 TTC1Q99614 292 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 MRPL40Q9NQ50 206 aaKnown RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 ABT1Q9ULW3 272 aaKnown RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 VWDEQ8N2E2 1590 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 PHF20L1A8MW92 1017 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 TCP11X1B4DZS4 312 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 CCDC22O60826 627 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 EEF1B2P24534 225 aaKnown RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 TMOD1P28289 359 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 PIK3CAP42336 1068 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 ATP2C1P98194 919 aaPredicted RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 LRRC14Q15048 493 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 SLC15A2Q16348 729 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 PFKFB3Q16875 520 aaPredicted RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 DPP9Q86TI2 863 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 ICA1LQ8NDH6 482 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 RFFLQ8WZ73 363 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 CHN1P15882 459 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 SEC24CP53992 1094 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 CACNB1Q02641 598 aaPredicted RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 OCA2Q04671 838 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 EPHA10Q5JZY3 1008 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 TMEM179Q6ZVK1 233 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 ZNF34Q8IZ26 560 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 PNKPQ96T60 521 aa21.04■□□□□ 0.96
SHANK1-203ENST00000391813 PAIP2BQ9ULR5 123 aaKnown RBP21.04■□□□□ 0.96
SHANK1-203ENST00000391813 USP32Q8NFA0 1604 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 TESPA1A2RU30 521 aaPredicted RBP21.03■□□□□ 0.96
SHANK1-203ENST00000391813 TEDDM1Q5T9Z0 273 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 TBC1D10CQ8IV04 446 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 RBM41Q96IZ5 413 aaKnown RBP21.03■□□□□ 0.96
SHANK1-203ENST00000391813 LY9Q9HBG7 655 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 MLXIPLQ9NP71 852 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 GINM1Q9NU53 330 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 HESX1Q9UBX0 185 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 CAMTA2O94983 1202 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 DNAJC9Q8WXX5 260 aa21.03■□□□□ 0.96
SHANK1-203ENST00000391813 PLEKHA8P1O95397 391 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 PYGBP11216 843 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 ABCD1P33897 745 aa21.02■□□□□ 0.96
SHANK1-203ENST00000391813 PRR5LQ6MZQ0 368 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms