RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Krt27Q9Z320 448 aa18.21■□□□□ 0.51
Ctcf-201ENSMUST00000005841 Vmn2r77L7N2B7 854 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Serpinc1P32261 465 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rfx2P48379 717 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 SkiQ60698 725 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Krt14Q61781 484 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 MregQ6NVG5 214 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Jmjd4Q8BFT6 427 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Sh3rf3Q8C120 878 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Zmynd10Q99ML0 440 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cabp5Q9JLK3 173 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Grk1Q9WVL4 564 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Nme9A0A1L1SUL6 329 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Apol10bG3X9K7 334 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rtn2O70622 471 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 CraddO88843 199 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Sar1aP36536 198 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Slf2Q6P9P0 1278 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rhbdf2Q80WQ6 827 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Dusp21Q9D9D8 189 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Pdcd7Q9WTY1 482 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Pramel6Q810Y9 485 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 HhatQ8BMT9 499 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 C130026I21RikQ8C898 291 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 ZgpatQ8VDM1 511 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Sec14l2Q99J08 403 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Trim34aQ99PP6 485 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PycardQ9EPB4 193 aa18.2■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Gucy1b3O54865 620 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ets2P15037 468 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Trip13Q3UA06 432 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Brsk2Q69Z98 735 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Sec63Q8VHE0 760 aaKnown RBP18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Slc5a4bQ91ZP4 660 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Slc35g2D3YVE8 412 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ccdc189Q6NZQ0 333 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 E2f7Q6S7F2 904 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PolnQ7TQ07 864 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Jag1Q9QXX0 1218 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Map3k15A2AQW0 1331 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Psmc6P62334 389 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Enoph1Q8BGB7 257 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Spire2Q8K1S6 718 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tbx22Q8K402 517 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rpap2Q8VC34 614 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Caap1Q8VDY9 356 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Gimap4Q99JY3 219 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ptgdr2Q9Z2J6 382 aa18.19■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tagap1P0CAX8 505 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 MlxipQ2VPU4 917 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 SfswapQ3USH5 945 aaKnown RBP18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fgfr1opQ66JX5 399 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PimregQ8BFY7 231 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 HlfQ8BW74 295 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cdk8Q8R3L8 464 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Uba5Q8VE47 403 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Subh2bvQ9D9Z7 123 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Krt71Q9R0H5 524 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PodxlQ9R0M4 503 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 A430078G23RikE9Q7Y4 484 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fam71e2L7N480 754 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cacnb1Q8R3Z5 597 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 AslQ91YI0 464 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Trim66Q924W6 1242 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cdc25aP48964 514 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PtpreP49446 699 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tmem120bQ3TA38 339 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Grid1Q61627 1009 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ints2Q80UK8 1198 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 PpihQ9D868 188 aa18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Rbm6S4R1W5 1118 aaKnown RBP18.18■□□□□ 0.5
Ctcf-201ENSMUST00000005841 HalP35492 657 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ddx19bQ8BZY3 494 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fgfr1op2Q9CRA9 253 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Tacc3Q9JJ11 631 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Pard6bQ9JK83 371 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Phtf1Q9QZ09 761 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Astn1Q61137 1302 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 1700016G14RikA0A286YCZ6 238 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Cetn3O35648 167 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Calb2Q08331 271 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Bpifb5Q3UQ05 490 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Gbp4Q61107 620 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Calml4Q91WQ9 153 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Paip2Q9D6V8 124 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Osbpl7A2A716 963 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Usp35M0QWN7 1009 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Mpp3O88910 568 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 LdhaP06151 332 aaKnown RBP18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Syce2Q505B8 171 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 SpdyaQ5IBH7 310 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Krt31Q61765 416 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 NrcamQ810U4 1256 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 HibadhQ99L13 335 aaKnown RBP18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Ccdc91Q9D8L5 442 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Atp6v1c1Q9Z1G3 382 aa18.17■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Zfc3h1B2RT41 1992 aaKnown RBP18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Fam47eD3YWC7 402 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Akr1b7P21300 316 aa18.16■□□□□ 0.5
Ctcf-201ENSMUST00000005841 Znf276Q8CE64 614 aa18.16■□□□□ 0.5
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms