Protein–RNA interactions for Protein: Q9Z1G3

Atp6v1c1, V-type proton ATPase subunit C 1, mousemouse

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6v1c1Q9Z1G3 Gm25239-201ENSMUST00000174915 86 ntBASIC33.46■■■□□ 2.95
Atp6v1c1Q9Z1G3 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
Atp6v1c1Q9Z1G3 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
Atp6v1c1Q9Z1G3 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC32.04■■■□□ 2.72
Atp6v1c1Q9Z1G3 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
Atp6v1c1Q9Z1G3 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Atp6v1c1Q9Z1G3 Psd-208ENSMUST00000224556 2034 ntBASIC31.59■■■□□ 2.65
Atp6v1c1Q9Z1G3 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
Atp6v1c1Q9Z1G3 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
Atp6v1c1Q9Z1G3 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.03■■■□□ 2.4
Atp6v1c1Q9Z1G3 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Atp6v1c1Q9Z1G3 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC30.01■■■□□ 2.39
Atp6v1c1Q9Z1G3 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Atp6v1c1Q9Z1G3 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.87■■■□□ 2.37
Atp6v1c1Q9Z1G3 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.36
Atp6v1c1Q9Z1G3 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
Atp6v1c1Q9Z1G3 Gm15042-201ENSMUST00000120212 883 ntBASIC29.75■■■□□ 2.35
Atp6v1c1Q9Z1G3 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC29.75■■■□□ 2.35
Atp6v1c1Q9Z1G3 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.64■■■□□ 2.34
Atp6v1c1Q9Z1G3 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
Atp6v1c1Q9Z1G3 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
Atp6v1c1Q9Z1G3 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
Atp6v1c1Q9Z1G3 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.24■■■□□ 2.27
Atp6v1c1Q9Z1G3 Gm15045-201ENSMUST00000117359 883 ntBASIC29.1■■■□□ 2.25
Atp6v1c1Q9Z1G3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.99■■■□□ 2.23
Atp6v1c1Q9Z1G3 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
Atp6v1c1Q9Z1G3 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.89■■■□□ 2.22
Atp6v1c1Q9Z1G3 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
Atp6v1c1Q9Z1G3 Gm24109-201ENSMUST00000175489 103 ntBASIC28.72■■■□□ 2.19
Atp6v1c1Q9Z1G3 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Atp6v1c1Q9Z1G3 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
Atp6v1c1Q9Z1G3 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC28.62■■■□□ 2.17
Atp6v1c1Q9Z1G3 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
Atp6v1c1Q9Z1G3 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
Atp6v1c1Q9Z1G3 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.5■■■□□ 2.15
Atp6v1c1Q9Z1G3 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC28.46■■■□□ 2.15
Atp6v1c1Q9Z1G3 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Atp6v1c1Q9Z1G3 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC28.39■■■□□ 2.14
Atp6v1c1Q9Z1G3 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Atp6v1c1Q9Z1G3 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Atp6v1c1Q9Z1G3 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.18■■■□□ 2.1
Atp6v1c1Q9Z1G3 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.09■■■□□ 2.09
Atp6v1c1Q9Z1G3 Gm23366-201ENSMUST00000175022 89 ntBASIC28.06■■■□□ 2.08
Atp6v1c1Q9Z1G3 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Atp6v1c1Q9Z1G3 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
Atp6v1c1Q9Z1G3 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.02■■■□□ 2.08
Atp6v1c1Q9Z1G3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC28■■■□□ 2.07
Atp6v1c1Q9Z1G3 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.07
Atp6v1c1Q9Z1G3 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.86■■■□□ 2.05
Atp6v1c1Q9Z1G3 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Atp6v1c1Q9Z1G3 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.85■■■□□ 2.05
Atp6v1c1Q9Z1G3 Gm10524-201ENSMUST00000181931 1893 ntBASIC27.84■■■□□ 2.05
Atp6v1c1Q9Z1G3 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Atp6v1c1Q9Z1G3 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Atp6v1c1Q9Z1G3 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.75■■■□□ 2.03
Atp6v1c1Q9Z1G3 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.74■■■□□ 2.03
Atp6v1c1Q9Z1G3 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
Atp6v1c1Q9Z1G3 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Atp6v1c1Q9Z1G3 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Atp6v1c1Q9Z1G3 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Atp6v1c1Q9Z1G3 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.58■■■□□ 2.01
Atp6v1c1Q9Z1G3 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.48■■□□□ 1.99
Atp6v1c1Q9Z1G3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
Atp6v1c1Q9Z1G3 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.46■■□□□ 1.99
Atp6v1c1Q9Z1G3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC27.45■■□□□ 1.98
Atp6v1c1Q9Z1G3 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Atp6v1c1Q9Z1G3 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.35■■□□□ 1.97
Atp6v1c1Q9Z1G3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Atp6v1c1Q9Z1G3 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.31■■□□□ 1.96
Atp6v1c1Q9Z1G3 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
Atp6v1c1Q9Z1G3 Fndc10-201ENSMUST00000099265 2140 ntAPPRIS P1 BASIC27.27■■□□□ 1.96
Atp6v1c1Q9Z1G3 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC27.25■■□□□ 1.95
Atp6v1c1Q9Z1G3 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Atp6v1c1Q9Z1G3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.25■■□□□ 1.95
Atp6v1c1Q9Z1G3 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.22■■□□□ 1.95
Atp6v1c1Q9Z1G3 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
Atp6v1c1Q9Z1G3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Atp6v1c1Q9Z1G3 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Atp6v1c1Q9Z1G3 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
Atp6v1c1Q9Z1G3 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Atp6v1c1Q9Z1G3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Atp6v1c1Q9Z1G3 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
Atp6v1c1Q9Z1G3 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.03■■□□□ 1.92
Atp6v1c1Q9Z1G3 Gnai2-201ENSMUST00000055704 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Atp6v1c1Q9Z1G3 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC26.92■■□□□ 1.9
Atp6v1c1Q9Z1G3 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
Atp6v1c1Q9Z1G3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.89■■□□□ 1.9
Atp6v1c1Q9Z1G3 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC26.89■■□□□ 1.89
Atp6v1c1Q9Z1G3 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Atp6v1c1Q9Z1G3 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
Atp6v1c1Q9Z1G3 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC26.81■■□□□ 1.88
Atp6v1c1Q9Z1G3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
Atp6v1c1Q9Z1G3 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Atp6v1c1Q9Z1G3 CT025624.2-201ENSMUST00000223609 1909 ntBASIC26.61■■□□□ 1.85
Atp6v1c1Q9Z1G3 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Atp6v1c1Q9Z1G3 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Atp6v1c1Q9Z1G3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
Atp6v1c1Q9Z1G3 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC26.55■■□□□ 1.84
Atp6v1c1Q9Z1G3 Orai1-202ENSMUST00000121652 1875 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Atp6v1c1Q9Z1G3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.5■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 8.7 ms