Protein–RNA interactions for Protein: Q8C898

C130026I21Rik, RIKEN cDNA C130026I21 gene, mousemouse

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C130026I21RikQ8C898 Gm25239-201ENSMUST00000174915 86 ntBASIC36.92■■■■□ 3.5
C130026I21RikQ8C898 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
C130026I21RikQ8C898 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
C130026I21RikQ8C898 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC34.93■■■■□ 3.18
C130026I21RikQ8C898 Psd-208ENSMUST00000224556 2034 ntBASIC33.77■■■■□ 3
C130026I21RikQ8C898 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC33.73■■■□□ 2.99
C130026I21RikQ8C898 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC33.41■■■□□ 2.94
C130026I21RikQ8C898 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC33.38■■■□□ 2.93
C130026I21RikQ8C898 Gm15042-201ENSMUST00000120212 883 ntBASIC33.1■■■□□ 2.89
C130026I21RikQ8C898 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC32.97■■■□□ 2.87
C130026I21RikQ8C898 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
C130026I21RikQ8C898 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC32.69■■■□□ 2.82
C130026I21RikQ8C898 Gm15045-201ENSMUST00000117359 883 ntBASIC32.5■■■□□ 2.79
C130026I21RikQ8C898 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC32.5■■■□□ 2.79
C130026I21RikQ8C898 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
C130026I21RikQ8C898 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.78
C130026I21RikQ8C898 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC32.36■■■□□ 2.77
C130026I21RikQ8C898 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
C130026I21RikQ8C898 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
C130026I21RikQ8C898 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
C130026I21RikQ8C898 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
C130026I21RikQ8C898 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
C130026I21RikQ8C898 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
C130026I21RikQ8C898 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
C130026I21RikQ8C898 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
C130026I21RikQ8C898 Gm24109-201ENSMUST00000175489 103 ntBASIC31.6■■■□□ 2.65
C130026I21RikQ8C898 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.64
C130026I21RikQ8C898 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC31.54■■■□□ 2.64
C130026I21RikQ8C898 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC31.53■■■□□ 2.64
C130026I21RikQ8C898 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
C130026I21RikQ8C898 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC31.34■■■□□ 2.61
C130026I21RikQ8C898 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
C130026I21RikQ8C898 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
C130026I21RikQ8C898 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
C130026I21RikQ8C898 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
C130026I21RikQ8C898 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
C130026I21RikQ8C898 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC31■■■□□ 2.55
C130026I21RikQ8C898 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
C130026I21RikQ8C898 Gm23366-201ENSMUST00000175022 89 ntBASIC30.96■■■□□ 2.55
C130026I21RikQ8C898 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC30.94■■■□□ 2.54
C130026I21RikQ8C898 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC30.81■■■□□ 2.52
C130026I21RikQ8C898 Gm10524-201ENSMUST00000181931 1893 ntBASIC30.78■■■□□ 2.52
C130026I21RikQ8C898 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
C130026I21RikQ8C898 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
C130026I21RikQ8C898 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
C130026I21RikQ8C898 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC30.7■■■□□ 2.51
C130026I21RikQ8C898 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
C130026I21RikQ8C898 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
C130026I21RikQ8C898 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.4■■■□□ 2.46
C130026I21RikQ8C898 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.37■■■□□ 2.45
C130026I21RikQ8C898 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
C130026I21RikQ8C898 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC30.23■■■□□ 2.43
C130026I21RikQ8C898 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
C130026I21RikQ8C898 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
C130026I21RikQ8C898 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
C130026I21RikQ8C898 CT025624.2-201ENSMUST00000223609 1909 ntBASIC29.98■■■□□ 2.39
C130026I21RikQ8C898 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
C130026I21RikQ8C898 Gm42596-201ENSMUST00000196305 1958 ntBASIC29.92■■■□□ 2.38
C130026I21RikQ8C898 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.37
C130026I21RikQ8C898 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC29.85■■■□□ 2.37
C130026I21RikQ8C898 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
C130026I21RikQ8C898 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC29.83■■■□□ 2.37
C130026I21RikQ8C898 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
C130026I21RikQ8C898 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
C130026I21RikQ8C898 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
C130026I21RikQ8C898 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
C130026I21RikQ8C898 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC29.72■■■□□ 2.35
C130026I21RikQ8C898 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
C130026I21RikQ8C898 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC29.66■■■□□ 2.34
C130026I21RikQ8C898 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.34
C130026I21RikQ8C898 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC29.58■■■□□ 2.33
C130026I21RikQ8C898 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
C130026I21RikQ8C898 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
C130026I21RikQ8C898 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC29.43■■■□□ 2.3
C130026I21RikQ8C898 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC29.41■■■□□ 2.3
C130026I21RikQ8C898 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC29.32■■■□□ 2.28
C130026I21RikQ8C898 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC29.28■■■□□ 2.28
C130026I21RikQ8C898 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
C130026I21RikQ8C898 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC29.26■■■□□ 2.27
C130026I21RikQ8C898 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
C130026I21RikQ8C898 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
C130026I21RikQ8C898 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC29.16■■■□□ 2.26
C130026I21RikQ8C898 Gm27325-201ENSMUST00000175467 74 ntBASIC29.15■■■□□ 2.26
C130026I21RikQ8C898 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
C130026I21RikQ8C898 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
C130026I21RikQ8C898 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC29.09■■■□□ 2.25
C130026I21RikQ8C898 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC29.07■■■□□ 2.24
C130026I21RikQ8C898 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
C130026I21RikQ8C898 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC29.03■■■□□ 2.24
C130026I21RikQ8C898 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC29.01■■■□□ 2.23
C130026I21RikQ8C898 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
C130026I21RikQ8C898 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC29■■■□□ 2.23
C130026I21RikQ8C898 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
C130026I21RikQ8C898 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
C130026I21RikQ8C898 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC28.98■■■□□ 2.23
C130026I21RikQ8C898 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.94■■■□□ 2.22
C130026I21RikQ8C898 Gm25238-201ENSMUST00000174914 89 ntBASIC28.85■■■□□ 2.21
C130026I21RikQ8C898 Rpia-201ENSMUST00000066134 1829 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
C130026I21RikQ8C898 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC28.82■■■□□ 2.2
C130026I21RikQ8C898 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC28.82■■■□□ 2.2
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms