RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 MCX1P38323 520 aaPredicted RBP2.4□□□□□ -2.03
snR47snR47 GLT1Q12680 2145 aaKnown RBP2.39□□□□□ -2.03
snR47snR47 CDC19P00549 500 aaKnown RBP2.39□□□□□ -2.03
snR47snR47 IXR1P33417 597 aa2.39□□□□□ -2.03
snR47snR47 AMN1P38285 549 aaPredicted RBP2.39□□□□□ -2.03
snR47snR47 SBE2P42223 864 aaKnown RBP2.39□□□□□ -2.03
snR47snR47 YNL115CP53925 644 aa2.39□□□□□ -2.03
snR47snR47 MAK21Q12176 1025 aaKnown RBP2.39□□□□□ -2.03
snR47snR47 COX6P00427 148 aa2.38□□□□□ -2.03
snR47snR47 YCK2P23292 546 aaKnown RBP2.38□□□□□ -2.03
snR47snR47 ADE12P80210 433 aaKnown RBP2.38□□□□□ -2.03
snR47snR47 SIT4P20604 311 aa2.37□□□□□ -2.03
snR47snR47 CUZ1P53899 274 aa2.37□□□□□ -2.03
snR47snR47 MAC1P35192 417 aa2.36□□□□□ -2.03
snR47snR47 CLB5P30283 435 aa2.35□□□□□ -2.03
snR47snR47 CEM1P39525 442 aa2.35□□□□□ -2.03
snR47snR47 VTC4P47075 721 aa2.35□□□□□ -2.03
snR47snR47 YPR097WQ06839 1073 aa2.35□□□□□ -2.03
snR47snR47 YDR215CQ12240 137 aa2.35□□□□□ -2.03
snR47snR47 LSB6P42951 607 aa2.34□□□□□ -2.03
snR47snR47 RPA14P50106 137 aa2.34□□□□□ -2.03
snR47snR47 SYT1Q06836 1226 aa2.34□□□□□ -2.03
snR47snR47 ALR1Q08269 859 aa2.34□□□□□ -2.03
snR47snR47 INP52P50942 1183 aa2.33□□□□□ -2.04
snR47snR47 GIS1Q03833 894 aa2.33□□□□□ -2.04
snR47snR47 YPR148CQ06523 435 aa2.32□□□□□ -2.04
snR47snR47 PSE1P32337 1089 aaKnown RBP2.31□□□□□ -2.04
snR47snR47 SLN1P39928 1220 aaPredicted RBP2.31□□□□□ -2.04
snR47snR47 MCA1Q08601 432 aa2.31□□□□□ -2.04
snR47snR47 YDR461C-AQ2V2P7 80 aa2.31□□□□□ -2.04
snR47snR47 EMW1P42842 904 aaKnown RBP2.3□□□□□ -2.04
snR47snR47 YNR014WP53719 212 aa2.3□□□□□ -2.04
snR47snR47 VAC17P25591 423 aa2.29□□□□□ -2.04
snR47snR47 YDL206WQ12424 762 aa2.29□□□□□ -2.04
snR47snR47 DIT1P21623 536 aa2.28□□□□□ -2.04
snR47snR47 ALO1P54783 526 aaKnown RBP2.28□□□□□ -2.04
snR47snR47 DAL1P32375 460 aa2.27□□□□□ -2.05
snR47snR47 OMA1P36163 345 aa2.27□□□□□ -2.05
snR47snR47 BOI2P39969 1040 aa2.27□□□□□ -2.05
snR47snR47 AVT1P47082 602 aa2.27□□□□□ -2.05
snR47snR47 AOS1Q06624 347 aa2.27□□□□□ -2.05
snR47snR47 GPM1P00950 247 aaKnown RBP2.26□□□□□ -2.05
snR47snR47 TAT1P38085 619 aa2.26□□□□□ -2.05
snR47snR47 PUS6P53294 404 aa2.26□□□□□ -2.05
snR47snR47 YMR265CQ03508 461 aaKnown RBP2.26□□□□□ -2.05
snR47snR47 KRE33P53914 1056 aaKnown RBP2.25□□□□□ -2.05
snR47snR47 SLY41P22215 453 aa2.24□□□□□ -2.05
snR47snR47 ELM1P32801 640 aa2.24□□□□□ -2.05
snR47snR47 BUB1P41695 1021 aaKnown RBP RIP-Chip data2.24□□□□□ -2.05not detected
snR47snR47 UBP15P50101 1230 aa2.24□□□□□ -2.05
snR47snR47 APP1P53933 587 aa2.24□□□□□ -2.05
snR47snR47 NIS1P53939 407 aa2.24□□□□□ -2.05
snR47snR47 TBF1Q02457 562 aa2.24□□□□□ -2.05
snR47snR47 DFG5Q05031 458 aa2.24□□□□□ -2.05
snR47snR47 MKS1P34072 584 aa2.22□□□□□ -2.05
snR47snR47 MET1P36150 593 aa2.22□□□□□ -2.05
snR47snR47 TRM1P15565 570 aaKnown RBP2.21□□□□□ -2.06
snR47snR47 STE6P12866 1290 aa2.2□□□□□ -2.06
snR47snR47 KNS1P32350 737 aaPredicted RBP2.2□□□□□ -2.06
snR47snR47 PRY1P47032 299 aa2.2□□□□□ -2.06
snR47snR47 NAF1P53919 492 aaKnown RBP2.2□□□□□ -2.06
snR47snR47 BDS1Q08347 646 aa2.2□□□□□ -2.06
snR47snR47 FBP26P32604 452 aa2.19□□□□□ -2.06
snR47snR47 SLA1P32790 1244 aa2.19□□□□□ -2.06
snR47snR47 TEA1P47988 759 aa2.19□□□□□ -2.06
snR47snR47 FPK1P53739 893 aa2.19□□□□□ -2.06
snR47snR47 ITT1Q04638 464 aa2.19□□□□□ -2.06
snR47snR47 PGM1P33401 570 aaKnown RBP2.18□□□□□ -2.06
snR47snR47 PDC5P16467 563 aaKnown RBP2.17□□□□□ -2.06
snR47snR47 MSN5P52918 1224 aa2.16□□□□□ -2.06
snR47snR47 TY1A-DR3Q12441 440 aa2.16□□□□□ -2.06
snR47snR47 UBP5P39944 805 aa2.15□□□□□ -2.07
snR47snR47 FPS1P23900 669 aa2.14□□□□□ -2.07
snR47snR47 YCR015CP25616 317 aa2.14□□□□□ -2.07
snR47snR47 TPS3P38426 1054 aaKnown RBP2.14□□□□□ -2.07
snR47snR47 VPS70P47161 811 aa2.14□□□□□ -2.07
snR47snR47 YKR073CP36153 106 aa2.13□□□□□ -2.07
snR47snR47 SSN3P39073 555 aa2.13□□□□□ -2.07
snR47snR47 BUD9P53226 547 aa2.13□□□□□ -2.07
snR47snR47 HST2P53686 357 aa2.13□□□□□ -2.07
snR47snR47 YMR196WQ04336 1088 aa2.13□□□□□ -2.07
snR47snR47 CTH1P47976 325 aa2.12□□□□□ -2.07
snR47snR47 FIG4P42837 879 aa2.11□□□□□ -2.07
snR47snR47 TY1A-DR2Q03964 440 aaKnown RBP2.11□□□□□ -2.07
snR47snR47 MED7Q08278 222 aa2.11□□□□□ -2.07
snR47snR47 TRP3P00937 484 aa2.1□□□□□ -2.07
snR47snR47 AI3P03877 415 aa2.1□□□□□ -2.07
snR47snR47 SCJ1P25303 377 aa2.1□□□□□ -2.07
snR47snR47 PUB1P32588 453 aaKnown RBP RIP-Chip data2.1□□□□□ -2.07not detected
snR47snR47 DLD3P39976 496 aaKnown RBP2.1□□□□□ -2.07
snR47snR47 ISU1Q03020 165 aa2.1□□□□□ -2.07
snR47snR47 RPP2BP02400 110 aaKnown RBP2.09□□□□□ -2.07
snR47snR47 RSC30P38781 883 aa2.09□□□□□ -2.07
snR47snR47 PBS2P08018 668 aa2.08□□□□□ -2.08
snR47snR47 YPR084WQ06821 456 aa2.08□□□□□ -2.08
snR47snR47 RNQ1P25367 405 aa2.07□□□□□ -2.08
snR47snR47 LIP5P32875 414 aa2.07□□□□□ -2.08
snR47snR47 YKL222CP35995 705 aa2.07□□□□□ -2.08
snR47snR47 AHP1P38013 176 aaKnown RBP2.07□□□□□ -2.08
snR47snR47 ARI1P53111 347 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms