RNA–Protein interactions for RNA: snR38

snR38, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR38, Length 95 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR38snR38 RTF1P53064 558 aa1.91□□□□□ -2.1
snR38snR38 AGE1Q04412 482 aa1.91□□□□□ -2.1
snR38snR38 ERF2Q06551 359 aa1.91□□□□□ -2.1
snR38snR38 TAT1P38085 619 aa1.9□□□□□ -2.11
snR38snR38 AMN1P38285 549 aaPredicted RBP1.9□□□□□ -2.11
snR38snR38 LSB6P42951 607 aa1.9□□□□□ -2.11
snR38snR38 OMA1P36163 345 aa1.89□□□□□ -2.11
snR38snR38 AVT1P47082 602 aa1.89□□□□□ -2.11
snR38snR38 RGR1P19263 1082 aa1.88□□□□□ -2.11
snR38snR38 SBE2P42223 864 aaKnown RBP1.88□□□□□ -2.11
snR38snR38 MET1P36150 593 aa1.87□□□□□ -2.11
snR38snR38 CUZ1P53899 274 aa1.87□□□□□ -2.11
snR38snR38 YNL115CP53925 644 aa1.87□□□□□ -2.11
snR38snR38 ALO1P54783 526 aaKnown RBP1.87□□□□□ -2.11
snR38snR38 ALR1Q08269 859 aa1.87□□□□□ -2.11
snR38snR38 PDC1P06169 563 aaKnown RBP1.86□□□□□ -2.11
snR38snR38 CLB5P30283 435 aa1.86□□□□□ -2.11
snR38snR38 BOI2P39969 1040 aa1.86□□□□□ -2.11
snR38snR38 YBL086CP38177 466 aa1.85□□□□□ -2.11
snR38snR38 AOS1Q06624 347 aa1.85□□□□□ -2.11
snR38snR38 MAK21Q12176 1025 aaKnown RBP1.85□□□□□ -2.11
snR38snR38 YDR215CQ12240 137 aa1.85□□□□□ -2.11
snR38snR38 CDC19P00549 500 aaKnown RBP1.84□□□□□ -2.11
snR38snR38 YCK2P23292 546 aaKnown RBP1.84□□□□□ -2.11
snR38snR38 REF2P42073 533 aaPredicted RBP1.84□□□□□ -2.11
snR38snR38 INP52P50942 1183 aa1.84□□□□□ -2.11
snR38snR38 NAM8Q00539 523 aaKnown RBP1.84□□□□□ -2.11
snR38snR38 SYT1Q06836 1226 aa1.84□□□□□ -2.11
snR38snR38 MCA1Q08601 432 aa1.84□□□□□ -2.11
snR38snR38 VTC4P47075 721 aa1.83□□□□□ -2.12
snR38snR38 TBF1Q02457 562 aa1.83□□□□□ -2.12
snR38snR38 YMR265CQ03508 461 aaKnown RBP1.83□□□□□ -2.12
snR38snR38 DIT1P21623 536 aa1.82□□□□□ -2.12
snR38snR38 SLN1P39928 1220 aaPredicted RBP1.82□□□□□ -2.12
snR38snR38 RPA14P50106 137 aa1.82□□□□□ -2.12
snR38snR38 YDR461C-AQ2V2P7 80 aa1.82□□□□□ -2.12
snR38snR38 KRE33P53914 1056 aaKnown RBP1.81□□□□□ -2.12
snR38snR38 YPR097WQ06839 1073 aa1.81□□□□□ -2.12
snR38snR38 COX6P00427 148 aa1.79□□□□□ -2.12
snR38snR38 ELM1P32801 640 aa1.79□□□□□ -2.12
snR38snR38 BDS1Q08347 646 aa1.78□□□□□ -2.12
snR38snR38 YDL206WQ12424 762 aa1.78□□□□□ -2.12
snR38snR38 GPM1P00950 247 aaKnown RBP1.77□□□□□ -2.13
snR38snR38 UBP5P39944 805 aa1.77□□□□□ -2.13
snR38snR38 UBP15P50101 1230 aa1.77□□□□□ -2.13
snR38snR38 PSE1P32337 1089 aaKnown RBP1.76□□□□□ -2.13
snR38snR38 DAL1P32375 460 aa1.76□□□□□ -2.13
snR38snR38 NAB2P32505 525 aaKnown RBP RIP-Chip data1.76□□□□□ -2.13not detected
snR38snR38 YKL222CP35995 705 aa1.76□□□□□ -2.13
snR38snR38 EMW1P42842 904 aaKnown RBP1.76□□□□□ -2.13
snR38snR38 PUS6P53294 404 aa1.76□□□□□ -2.13
snR38snR38 RPP2BP02400 110 aaKnown RBP1.75□□□□□ -2.13
snR38snR38 SIT4P20604 311 aa1.75□□□□□ -2.13
snR38snR38 SLY41P22215 453 aa1.75□□□□□ -2.13
snR38snR38 FPS1P23900 669 aa1.75□□□□□ -2.13
snR38snR38 VAC17P25591 423 aa1.75□□□□□ -2.13
snR38snR38 LIP5P32875 414 aa1.75□□□□□ -2.13
snR38snR38 MKS1P34072 584 aa1.75□□□□□ -2.13
snR38snR38 NAF1P53919 492 aaKnown RBP1.75□□□□□ -2.13
snR38snR38 APP1P53933 587 aa1.75□□□□□ -2.13
snR38snR38 PRY1P47032 299 aa1.74□□□□□ -2.13
snR38snR38 MED7Q08278 222 aa1.74□□□□□ -2.13
snR38snR38 KNS1P32350 737 aaPredicted RBP1.73□□□□□ -2.13
snR38snR38 DFG5Q05031 458 aa1.73□□□□□ -2.13
snR38snR38 DLD3P39976 496 aaKnown RBP1.72□□□□□ -2.13
snR38snR38 YCR015CP25616 317 aa1.71□□□□□ -2.14
snR38snR38 TPS3P38426 1054 aaKnown RBP1.71□□□□□ -2.14
snR38snR38 BUB1P41695 1021 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
snR38snR38 YMR196WQ04336 1088 aa1.71□□□□□ -2.14
snR38snR38 TEA1P47988 759 aa1.7□□□□□ -2.14
snR38snR38 RPP1AP05318 106 aaPredicted RBP1.69□□□□□ -2.14
snR38snR38 PDC5P16467 563 aaKnown RBP1.69□□□□□ -2.14
snR38snR38 COQ2P32378 372 aa1.69□□□□□ -2.14
snR38snR38 FBP26P32604 452 aa1.69□□□□□ -2.14
snR38snR38 KAE1P36132 386 aa1.69□□□□□ -2.14
snR38snR38 AHP1P38013 176 aaKnown RBP1.69□□□□□ -2.14
snR38snR38 STE6P12866 1290 aa1.68□□□□□ -2.14
snR38snR38 PUB1P32588 453 aaKnown RBP RIP-Chip data1.68□□□□□ -2.14not detected
snR38snR38 TOS1P38288 455 aa1.68□□□□□ -2.14
snR38snR38 MSN5P52918 1224 aa1.68□□□□□ -2.14
snR38snR38 TRM1P15565 570 aaKnown RBP1.67□□□□□ -2.14
snR38snR38 YGR130CP53278 816 aa1.67□□□□□ -2.14
snR38snR38 NIS1P53939 407 aa1.67□□□□□ -2.14
snR38snR38 NHA1Q99271 985 aa1.67□□□□□ -2.14
snR38snR38 PGM1P33401 570 aaKnown RBP1.66□□□□□ -2.14
snR38snR38 YKR073CP36153 106 aa1.66□□□□□ -2.14
snR38snR38 BRE4Q07660 1125 aa1.66□□□□□ -2.14
snR38snR38 AI3P03877 415 aa1.65□□□□□ -2.15
snR38snR38 SAC7P17121 654 aa1.65□□□□□ -2.15
snR38snR38 YPT53P36019 220 aa1.65□□□□□ -2.15
snR38snR38 BUD9P53226 547 aa1.65□□□□□ -2.15
snR38snR38 YPR148CQ06523 435 aa1.65□□□□□ -2.15
snR38snR38 RNQ1P25367 405 aa1.64□□□□□ -2.15
snR38snR38 NIT1P40447 199 aa1.64□□□□□ -2.15
snR38snR38 ARI1P53111 347 aaKnown RBP1.64□□□□□ -2.15
snR38snR38 FPK1P53739 893 aa1.64□□□□□ -2.15
snR38snR38 MCM16Q12262 181 aa1.64□□□□□ -2.15
snR38snR38 TAD3Q9URQ3 322 aa1.64□□□□□ -2.15
snR38snR38 TRP3P00937 484 aa1.63□□□□□ -2.15
snR38snR38 CHS2P14180 963 aa1.63□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms