RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C IME2P32581 645 aa7.56□□□□□ -1.2
VPS4YPR173C ORC6P38826 435 aa7.56□□□□□ -1.2
VPS4YPR173C VPS27P40343 622 aaKnown RBP7.56□□□□□ -1.2
VPS4YPR173C ESL2P36168 1195 aa7.55□□□□□ -1.2
VPS4YPR173C TAF5P38129 798 aa7.55□□□□□ -1.2
VPS4YPR173C DMA2P53924 522 aa7.55□□□□□ -1.2
VPS4YPR173C FPR3P38911 411 aaKnown RBP7.54□□□□□ -1.2
VPS4YPR173C KIP3P53086 805 aaKnown RBP7.54□□□□□ -1.2
VPS4YPR173C CLC1P17891 233 aa7.53□□□□□ -1.2
VPS4YPR173C IOC4Q04213 475 aa7.53□□□□□ -1.2
VPS4YPR173C BMT6Q12291 365 aa7.53□□□□□ -1.2
VPS4YPR173C EBP2P36049 427 aaKnown RBP7.52□□□□□ -1.2
VPS4YPR173C BNR1P40450 1375 aa7.52□□□□□ -1.21
VPS4YPR173C GAP1P19145 602 aaPredicted RBP7.52□□□□□ -1.21
VPS4YPR173C OPY1P38271 328 aa7.52□□□□□ -1.21
VPS4YPR173C FUN12P39730 1002 aaKnown RBP7.52□□□□□ -1.21
VPS4YPR173C TFG1P41895 735 aaPredicted RBP7.52□□□□□ -1.21
VPS4YPR173C YRB30P53107 440 aaPredicted RBP7.52□□□□□ -1.21
VPS4YPR173C PML39Q03760 334 aa7.52□□□□□ -1.21
VPS4YPR173C CSC1Q06538 782 aa7.52□□□□□ -1.21
VPS4YPR173C RVB2Q12464 471 aaKnown RBP7.52□□□□□ -1.21
VPS4YPR173C SEC7P11075 2009 aaKnown RBP7.51□□□□□ -1.21
VPS4YPR173C CDC73Q06697 393 aa7.51□□□□□ -1.21
VPS4YPR173C NCR1Q12200 1170 aa7.51□□□□□ -1.21
VPS4YPR173C DRS2P39524 1355 aa7.5□□□□□ -1.21
VPS4YPR173C CHC1P22137 1653 aaKnown RBP7.5□□□□□ -1.21
VPS4YPR173C MID1P41821 548 aa7.5□□□□□ -1.21
VPS4YPR173C YFR016CP43597 1233 aaKnown RBP7.5□□□□□ -1.21
VPS4YPR173C EAF7P53911 425 aaKnown RBP7.5□□□□□ -1.21
VPS4YPR173C RGR1P19263 1082 aa7.49□□□□□ -1.21
VPS4YPR173C YDL129WQ07555 291 aa7.49□□□□□ -1.21
VPS4YPR173C MVP1P40959 511 aaKnown RBP7.48□□□□□ -1.21
VPS4YPR173C PDR11P40550 1411 aa7.47□□□□□ -1.21
VPS4YPR173C YRF1-1P0CX20 1796 aa7.47□□□□□ -1.21
VPS4YPR173C YRF1-5P0CX21 1796 aa7.47□□□□□ -1.21
VPS4YPR173C YRF1-8P0CX22 1796 aa7.47□□□□□ -1.21
VPS4YPR173C CLB5P30283 435 aa7.47□□□□□ -1.21
VPS4YPR173C YIR014WP40570 242 aa7.47□□□□□ -1.21
VPS4YPR173C TEA1P47988 759 aa7.47□□□□□ -1.21
VPS4YPR173C DPL1Q05567 589 aa7.47□□□□□ -1.21
VPS4YPR173C MPC54Q08550 464 aa7.47□□□□□ -1.21
VPS4YPR173C TFB4Q12004 338 aa7.47□□□□□ -1.21
VPS4YPR173C SPE2P21182 396 aa7.46□□□□□ -1.22
VPS4YPR173C GUA1P38625 525 aaKnown RBP7.45□□□□□ -1.22
VPS4YPR173C PEX21P50091 288 aa7.45□□□□□ -1.22
VPS4YPR173C PEX29Q03370 554 aa7.45□□□□□ -1.22
VPS4YPR173C YDL144CQ07589 356 aa7.45□□□□□ -1.22
VPS4YPR173C VMR1P38735 1592 aa7.44□□□□□ -1.22
VPS4YPR173C YPR109WQ06104 294 aa7.44□□□□□ -1.22
VPS4YPR173C ISU2Q12056 156 aa7.42□□□□□ -1.22
VPS4YPR173C MLP1Q02455 1875 aaKnown RBP7.41□□□□□ -1.22
VPS4YPR173C DOP1Q03921 1698 aa7.41□□□□□ -1.22
VPS4YPR173C MET5P47169 1442 aa7.4□□□□□ -1.22
VPS4YPR173C SUI2P20459 304 aaKnown RBP7.4□□□□□ -1.22
VPS4YPR173C SNF7P39929 240 aaKnown RBP7.4□□□□□ -1.22
VPS4YPR173C NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.4□□□□□ -1.22not detected
VPS4YPR173C TUM1Q08686 304 aaKnown RBP7.4□□□□□ -1.22
VPS4YPR173C NUP192P47054 1683 aa7.39□□□□□ -1.23
VPS4YPR173C CSN12P47130 423 aa7.39□□□□□ -1.23
VPS4YPR173C NMA111P53920 997 aa7.39□□□□□ -1.23
VPS4YPR173C DNF2Q12675 1612 aa7.38□□□□□ -1.23
VPS4YPR173C SAP30P38429 201 aa7.38□□□□□ -1.23
VPS4YPR173C CHZ1P40019 153 aaPredicted RBP7.38□□□□□ -1.23
VPS4YPR173C HGH1P48362 394 aaKnown RBP7.38□□□□□ -1.23
VPS4YPR173C IML1P47170 1584 aa7.38□□□□□ -1.23
VPS4YPR173C NUP188P52593 1655 aaKnown RBP7.38□□□□□ -1.23
VPS4YPR173C ARH1P48360 493 aa7.37□□□□□ -1.23
VPS4YPR173C RAD2P07276 1031 aa7.36□□□□□ -1.23
VPS4YPR173C TRK1P12685 1235 aa7.36□□□□□ -1.23
VPS4YPR173C YEF3P16521 1044 aaKnown RBP7.36□□□□□ -1.23
VPS4YPR173C MPP10P47083 593 aaKnown RBP7.36□□□□□ -1.23
VPS4YPR173C NIS1P53939 407 aa7.36□□□□□ -1.23
VPS4YPR173C HPC2Q01448 625 aa7.36□□□□□ -1.23
VPS4YPR173C YRR1Q12172 810 aa7.36□□□□□ -1.23
VPS4YPR173C SSA2P10592 639 aaKnown RBP7.35□□□□□ -1.23
VPS4YPR173C YAP3P38749 330 aa7.35□□□□□ -1.23
VPS4YPR173C HAP5Q02516 242 aa7.35□□□□□ -1.23
VPS4YPR173C ROX1P25042 368 aa7.34□□□□□ -1.23
VPS4YPR173C MNN4P36044 1178 aa7.34□□□□□ -1.23
VPS4YPR173C TCB2P48231 1178 aa7.34□□□□□ -1.23
VPS4YPR173C TAF8Q03750 510 aa7.34□□□□□ -1.23
VPS4YPR173C YMR196WQ04336 1088 aa7.34□□□□□ -1.23
VPS4YPR173C TYW1Q08960 810 aaKnown RBP7.34□□□□□ -1.23
VPS4YPR173C BUD27P43573 796 aaKnown RBP RIP-Chip data7.33□□□□□ -1.24not detected
VPS4YPR173C ALD4P46367 519 aaKnown RBP7.33□□□□□ -1.24
VPS4YPR173C FPK1P53739 893 aa7.33□□□□□ -1.24
VPS4YPR173C SNF2P22082 1703 aa7.33□□□□□ -1.24
VPS4YPR173C TFB3Q03290 321 aa7.32□□□□□ -1.24
VPS4YPR173C PCT1P13259 424 aa7.31□□□□□ -1.24
VPS4YPR173C SIT4P20604 311 aa7.31□□□□□ -1.24
VPS4YPR173C NAP1P25293 417 aaKnown RBP7.31□□□□□ -1.24
VPS4YPR173C KTR1P27810 393 aaKnown RBP7.31□□□□□ -1.24
VPS4YPR173C RTR1P40084 226 aaPredicted RBP7.31□□□□□ -1.24
VPS4YPR173C SAP155P43612 1002 aa7.31□□□□□ -1.24
VPS4YPR173C HST2P53686 357 aa7.31□□□□□ -1.24
VPS4YPR173C GLN1P32288 370 aaKnown RBP7.3□□□□□ -1.24
VPS4YPR173C VPS24P36095 224 aaKnown RBP7.3□□□□□ -1.24
VPS4YPR173C BRL1P38770 471 aa7.3□□□□□ -1.24
VPS4YPR173C BNI4P53858 892 aa7.3□□□□□ -1.24
VPS4YPR173C BCK1Q01389 1478 aa7.29□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 30.7 ms