RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C LYS4P49367 693 aaPredicted RBP9.82□□□□□ -0.84
UME1YPL139C RTG3P38165 486 aa9.81□□□□□ -0.84
UME1YPL139C YRF1-4O13559 1382 aa9.8□□□□□ -0.84
UME1YPL139C YKL133CP36066 463 aa9.8□□□□□ -0.84
UME1YPL139C YKR075CP36155 307 aa9.8□□□□□ -0.84
UME1YPL139C MLP1Q02455 1875 aaKnown RBP9.79□□□□□ -0.84
UME1YPL139C COBP00163 385 aa9.79□□□□□ -0.84
UME1YPL139C DPS1P04802 557 aaKnown RBP9.79□□□□□ -0.84
UME1YPL139C YBL086CP38177 466 aa9.79□□□□□ -0.84
UME1YPL139C GAS4Q08271 471 aa9.79□□□□□ -0.84
UME1YPL139C SNF2P22082 1703 aa9.77□□□□□ -0.84
UME1YPL139C CTH1P47976 325 aa9.77□□□□□ -0.84
UME1YPL139C UBP1P25037 809 aa9.76□□□□□ -0.85
UME1YPL139C FRK1Q03002 865 aaPredicted RBP9.75□□□□□ -0.85
UME1YPL139C SIR4P11978 1358 aa9.75□□□□□ -0.85
UME1YPL139C ADE16P54113 591 aaKnown RBP9.75□□□□□ -0.85
UME1YPL139C HIM1Q06674 414 aa9.75□□□□□ -0.85
UME1YPL139C RTG1P32607 177 aa9.74□□□□□ -0.85
UME1YPL139C RCR1P38212 213 aa9.74□□□□□ -0.85
UME1YPL139C PDI1P17967 522 aaKnown RBP9.73□□□□□ -0.85
UME1YPL139C EDE1P34216 1381 aa9.72□□□□□ -0.85
UME1YPL139C EAP1P36041 632 aaKnown RBP9.72□□□□□ -0.85
UME1YPL139C NST1P53935 1240 aa9.72□□□□□ -0.85
UME1YPL139C NCR1Q12200 1170 aa9.72□□□□□ -0.85
UME1YPL139C MSB4Q12317 492 aa9.72□□□□□ -0.85
UME1YPL139C ENP1P38333 483 aaKnown RBP9.71□□□□□ -0.86
UME1YPL139C YEF3P16521 1044 aaKnown RBP9.7□□□□□ -0.86
UME1YPL139C SEC3P33332 1336 aaKnown RBP9.7□□□□□ -0.86
UME1YPL139C RPO41P13433 1351 aaKnown RBP9.7□□□□□ -0.86
UME1YPL139C MHP1P43638 1398 aa9.7□□□□□ -0.86
UME1YPL139C RIM15P43565 1770 aa9.69□□□□□ -0.86
UME1YPL139C LAM6Q08001 693 aa9.69□□□□□ -0.86
UME1YPL139C SSA2P10592 639 aaKnown RBP9.68□□□□□ -0.86
UME1YPL139C TAP42Q04372 366 aa9.68□□□□□ -0.86
UME1YPL139C AI2P03876 854 aa9.67□□□□□ -0.86
UME1YPL139C PRP40P33203 583 aaKnown RBP9.67□□□□□ -0.86
UME1YPL139C YJL181WP46987 611 aa9.67□□□□□ -0.86
UME1YPL139C RTF1P53064 558 aa9.67□□□□□ -0.86
UME1YPL139C PDS5Q04264 1277 aa9.66□□□□□ -0.86
UME1YPL139C BCK2P33306 851 aa9.65□□□□□ -0.86
UME1YPL139C RGA2Q06407 1009 aa9.65□□□□□ -0.86
UME1YPL139C INP54Q08227 384 aaKnown RBP9.64□□□□□ -0.87
UME1YPL139C GRX4P32642 244 aa9.63□□□□□ -0.87
UME1YPL139C UGA2P38067 497 aa9.63□□□□□ -0.87
UME1YPL139C PIB1Q06651 286 aa9.63□□□□□ -0.87
UME1YPL139C TRK1P12685 1235 aa9.63□□□□□ -0.87
UME1YPL139C ALD2P47771 506 aa9.63□□□□□ -0.87
UME1YPL139C POL5P39985 1022 aaKnown RBP9.62□□□□□ -0.87
UME1YPL139C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
UME1YPL139C RSM7P47150 247 aa9.62□□□□□ -0.87
UME1YPL139C MEC3Q02574 474 aa9.62□□□□□ -0.87
UME1YPL139C SEC61P32915 480 aa9.61□□□□□ -0.87
UME1YPL139C TRP5P00931 707 aaKnown RBP9.6□□□□□ -0.87
UME1YPL139C OSM1P21375 501 aaKnown RBP9.59□□□□□ -0.87
UME1YPL139C SCT1P32784 759 aa9.59□□□□□ -0.87
UME1YPL139C YNL035CP53962 389 aaKnown RBP9.58□□□□□ -0.88
UME1YPL139C NUP145P49687 1317 aa9.57□□□□□ -0.88
UME1YPL139C KAR2P16474 682 aaKnown RBP9.57□□□□□ -0.88
UME1YPL139C ATG13Q06628 738 aa9.56□□□□□ -0.88
UME1YPL139C TUM1Q08686 304 aaKnown RBP9.56□□□□□ -0.88
UME1YPL139C DSD1P53095 428 aa9.55□□□□□ -0.88
UME1YPL139C GRE2Q12068 342 aaKnown RBP9.55□□□□□ -0.88
UME1YPL139C RRP46P53256 223 aaPredicted RBP9.54□□□□□ -0.88
UME1YPL139C HSP104P31539 908 aaKnown RBP9.52□□□□□ -0.88
UME1YPL139C SET4P42948 560 aa9.52□□□□□ -0.88
UME1YPL139C YOL036WQ08206 761 aa9.52□□□□□ -0.88
UME1YPL139C SSA1P10591 642 aaKnown RBP9.51□□□□□ -0.89
UME1YPL139C AKL1P38080 1108 aaKnown RBP9.51□□□□□ -0.89
UME1YPL139C TOS1P38288 455 aa9.51□□□□□ -0.89
UME1YPL139C PSD2P53037 1138 aaKnown RBP9.51□□□□□ -0.89
UME1YPL139C RAD4P14736 754 aa9.5□□□□□ -0.89
UME1YPL139C EAF6P47128 113 aa9.5□□□□□ -0.89
UME1YPL139C RIX7Q07844 837 aaKnown RBP9.5□□□□□ -0.89
UME1YPL139C YBP2P53169 641 aa9.5□□□□□ -0.89
UME1YPL139C PAP2P53632 584 aaKnown RBP9.5□□□□□ -0.89
UME1YPL139C BUG1Q12191 341 aa9.5□□□□□ -0.89
UME1YPL139C SPT7P35177 1332 aa9.49□□□□□ -0.89
UME1YPL139C GRX1P25373 110 aaKnown RBP9.49□□□□□ -0.89
UME1YPL139C ALD3P54114 506 aa9.48□□□□□ -0.89
UME1YPL139C CHL1P22516 861 aaPredicted RBP9.46□□□□□ -0.9
UME1YPL139C TFG1P41895 735 aaPredicted RBP9.46□□□□□ -0.9
UME1YPL139C UTP10P42945 1769 aaKnown RBP9.46□□□□□ -0.9
UME1YPL139C NTH2P35172 780 aa9.45□□□□□ -0.9
UME1YPL139C ALE1Q08548 619 aa9.45□□□□□ -0.9
UME1YPL139C UTP22P53254 1237 aaPredicted RBP9.44□□□□□ -0.9
UME1YPL139C SAP30P38429 201 aa9.43□□□□□ -0.9
UME1YPL139C NYV1Q12255 253 aa9.43□□□□□ -0.9
UME1YPL139C CTF4Q01454 927 aa9.42□□□□□ -0.9
UME1YPL139C AOS1Q06624 347 aa9.42□□□□□ -0.9
UME1YPL139C KIN4Q01919 800 aa9.41□□□□□ -0.9
UME1YPL139C HPC2Q01448 625 aa9.4□□□□□ -0.9
UME1YPL139C CTI6Q08923 506 aa9.4□□□□□ -0.9
UME1YPL139C BUD27P43573 796 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
UME1YPL139C TEA1P47988 759 aa9.39□□□□□ -0.91
UME1YPL139C MSN5P52918 1224 aa9.39□□□□□ -0.91
UME1YPL139C RMT2Q03305 412 aa9.39□□□□□ -0.91
UME1YPL139C KCC4P25389 1037 aa9.38□□□□□ -0.91
UME1YPL139C NOP53Q12080 455 aaKnown RBP9.37□□□□□ -0.91
UME1YPL139C PRE3P38624 215 aa9.37□□□□□ -0.91
UME1YPL139C SAP155P43612 1002 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms