RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C LYS4P49367 693 aaPredicted RBP9.82□□□□□ -0.84
UME1YPL139C RTG3P38165 486 aa9.81□□□□□ -0.84
UME1YPL139C YRF1-4O13559 1382 aa9.8□□□□□ -0.84
UME1YPL139C YKL133CP36066 463 aa9.8□□□□□ -0.84
UME1YPL139C YKR075CP36155 307 aa9.8□□□□□ -0.84
UME1YPL139C MLP1Q02455 1875 aaKnown RBP9.79□□□□□ -0.84
UME1YPL139C COBP00163 385 aa9.79□□□□□ -0.84
UME1YPL139C DPS1P04802 557 aaKnown RBP9.79□□□□□ -0.84
UME1YPL139C YBL086CP38177 466 aa9.79□□□□□ -0.84
UME1YPL139C GAS4Q08271 471 aa9.79□□□□□ -0.84
UME1YPL139C SNF2P22082 1703 aa9.77□□□□□ -0.84
UME1YPL139C CTH1P47976 325 aa9.77□□□□□ -0.84
UME1YPL139C UBP1P25037 809 aa9.76□□□□□ -0.85
UME1YPL139C FRK1Q03002 865 aaPredicted RBP9.75□□□□□ -0.85
UME1YPL139C SIR4P11978 1358 aa9.75□□□□□ -0.85
UME1YPL139C ADE16P54113 591 aaKnown RBP9.75□□□□□ -0.85
UME1YPL139C HIM1Q06674 414 aa9.75□□□□□ -0.85
UME1YPL139C RTG1P32607 177 aa9.74□□□□□ -0.85
UME1YPL139C RCR1P38212 213 aa9.74□□□□□ -0.85
UME1YPL139C PDI1P17967 522 aaKnown RBP9.73□□□□□ -0.85
UME1YPL139C EDE1P34216 1381 aa9.72□□□□□ -0.85
UME1YPL139C EAP1P36041 632 aaKnown RBP9.72□□□□□ -0.85
UME1YPL139C NST1P53935 1240 aa9.72□□□□□ -0.85
UME1YPL139C NCR1Q12200 1170 aa9.72□□□□□ -0.85
UME1YPL139C MSB4Q12317 492 aa9.72□□□□□ -0.85
UME1YPL139C ENP1P38333 483 aaKnown RBP9.71□□□□□ -0.86
UME1YPL139C YEF3P16521 1044 aaKnown RBP9.7□□□□□ -0.86
UME1YPL139C SEC3P33332 1336 aaKnown RBP9.7□□□□□ -0.86
UME1YPL139C RPO41P13433 1351 aaKnown RBP9.7□□□□□ -0.86
UME1YPL139C MHP1P43638 1398 aa9.7□□□□□ -0.86
UME1YPL139C RIM15P43565 1770 aa9.69□□□□□ -0.86
UME1YPL139C LAM6Q08001 693 aa9.69□□□□□ -0.86
UME1YPL139C SSA2P10592 639 aaKnown RBP9.68□□□□□ -0.86
UME1YPL139C TAP42Q04372 366 aa9.68□□□□□ -0.86
UME1YPL139C AI2P03876 854 aa9.67□□□□□ -0.86
UME1YPL139C PRP40P33203 583 aaKnown RBP9.67□□□□□ -0.86
UME1YPL139C YJL181WP46987 611 aa9.67□□□□□ -0.86
UME1YPL139C RTF1P53064 558 aa9.67□□□□□ -0.86
UME1YPL139C PDS5Q04264 1277 aa9.66□□□□□ -0.86
UME1YPL139C BCK2P33306 851 aa9.65□□□□□ -0.86
UME1YPL139C RGA2Q06407 1009 aa9.65□□□□□ -0.86
UME1YPL139C INP54Q08227 384 aaKnown RBP9.64□□□□□ -0.87
UME1YPL139C GRX4P32642 244 aa9.63□□□□□ -0.87
UME1YPL139C UGA2P38067 497 aa9.63□□□□□ -0.87
UME1YPL139C PIB1Q06651 286 aa9.63□□□□□ -0.87
UME1YPL139C TRK1P12685 1235 aa9.63□□□□□ -0.87
UME1YPL139C ALD2P47771 506 aa9.63□□□□□ -0.87
UME1YPL139C POL5P39985 1022 aaKnown RBP9.62□□□□□ -0.87
UME1YPL139C BUB1P41695 1021 aaKnown RBP RIP-Chip data9.62□□□□□ -0.87not detected
UME1YPL139C RSM7P47150 247 aa9.62□□□□□ -0.87
UME1YPL139C MEC3Q02574 474 aa9.62□□□□□ -0.87
UME1YPL139C SEC61P32915 480 aa9.61□□□□□ -0.87
UME1YPL139C TRP5P00931 707 aaKnown RBP9.6□□□□□ -0.87
UME1YPL139C OSM1P21375 501 aaKnown RBP9.59□□□□□ -0.87
UME1YPL139C SCT1P32784 759 aa9.59□□□□□ -0.87
UME1YPL139C YNL035CP53962 389 aaKnown RBP9.58□□□□□ -0.88
UME1YPL139C NUP145P49687 1317 aa9.57□□□□□ -0.88
UME1YPL139C KAR2P16474 682 aaKnown RBP9.57□□□□□ -0.88
UME1YPL139C ATG13Q06628 738 aa9.56□□□□□ -0.88
UME1YPL139C TUM1Q08686 304 aaKnown RBP9.56□□□□□ -0.88
UME1YPL139C DSD1P53095 428 aa9.55□□□□□ -0.88
UME1YPL139C GRE2Q12068 342 aaKnown RBP9.55□□□□□ -0.88
UME1YPL139C RRP46P53256 223 aaPredicted RBP9.54□□□□□ -0.88
UME1YPL139C HSP104P31539 908 aaKnown RBP9.52□□□□□ -0.88
UME1YPL139C SET4P42948 560 aa9.52□□□□□ -0.88
UME1YPL139C YOL036WQ08206 761 aa9.52□□□□□ -0.88
UME1YPL139C SSA1P10591 642 aaKnown RBP9.51□□□□□ -0.89
UME1YPL139C AKL1P38080 1108 aaKnown RBP9.51□□□□□ -0.89
UME1YPL139C TOS1P38288 455 aa9.51□□□□□ -0.89
UME1YPL139C PSD2P53037 1138 aaKnown RBP9.51□□□□□ -0.89
UME1YPL139C RAD4P14736 754 aa9.5□□□□□ -0.89
UME1YPL139C EAF6P47128 113 aa9.5□□□□□ -0.89
UME1YPL139C RIX7Q07844 837 aaKnown RBP9.5□□□□□ -0.89
UME1YPL139C YBP2P53169 641 aa9.5□□□□□ -0.89
UME1YPL139C PAP2P53632 584 aaKnown RBP9.5□□□□□ -0.89
UME1YPL139C BUG1Q12191 341 aa9.5□□□□□ -0.89
UME1YPL139C SPT7P35177 1332 aa9.49□□□□□ -0.89
UME1YPL139C GRX1P25373 110 aaKnown RBP9.49□□□□□ -0.89
UME1YPL139C ALD3P54114 506 aa9.48□□□□□ -0.89
UME1YPL139C CHL1P22516 861 aaPredicted RBP9.46□□□□□ -0.9
UME1YPL139C TFG1P41895 735 aaPredicted RBP9.46□□□□□ -0.9
UME1YPL139C UTP10P42945 1769 aaKnown RBP9.46□□□□□ -0.9
UME1YPL139C NTH2P35172 780 aa9.45□□□□□ -0.9
UME1YPL139C ALE1Q08548 619 aa9.45□□□□□ -0.9
UME1YPL139C UTP22P53254 1237 aaPredicted RBP9.44□□□□□ -0.9
UME1YPL139C SAP30P38429 201 aa9.43□□□□□ -0.9
UME1YPL139C NYV1Q12255 253 aa9.43□□□□□ -0.9
UME1YPL139C CTF4Q01454 927 aa9.42□□□□□ -0.9
UME1YPL139C AOS1Q06624 347 aa9.42□□□□□ -0.9
UME1YPL139C KIN4Q01919 800 aa9.41□□□□□ -0.9
UME1YPL139C HPC2Q01448 625 aa9.4□□□□□ -0.9
UME1YPL139C CTI6Q08923 506 aa9.4□□□□□ -0.9
UME1YPL139C BUD27P43573 796 aaKnown RBP RIP-Chip data9.39□□□□□ -0.91not detected
UME1YPL139C TEA1P47988 759 aa9.39□□□□□ -0.91
UME1YPL139C MSN5P52918 1224 aa9.39□□□□□ -0.91
UME1YPL139C RMT2Q03305 412 aa9.39□□□□□ -0.91
UME1YPL139C KCC4P25389 1037 aa9.38□□□□□ -0.91
UME1YPL139C NOP53Q12080 455 aaKnown RBP9.37□□□□□ -0.91
UME1YPL139C PRE3P38624 215 aa9.37□□□□□ -0.91
UME1YPL139C SAP155P43612 1002 aa9.37□□□□□ -0.91
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms