RNA–Protein interactions for RNA: YPL018W

CTF19, Transcript of Outer kinetochore protein, needed for accurate chromosome segregation, yeastyeast

Gene CTF19, Length 1,110 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTF19YPL018W RTR1P40084 226 aaPredicted RBP8.29□□□□□ -1.08
CTF19YPL018W AKL1P38080 1108 aaKnown RBP8.27□□□□□ -1.09
CTF19YPL018W DSD1P53095 428 aa8.27□□□□□ -1.09
CTF19YPL018W RRP46P53256 223 aaPredicted RBP8.27□□□□□ -1.09
CTF19YPL018W MEC3Q02574 474 aa8.27□□□□□ -1.09
CTF19YPL018W HSP104P31539 908 aaKnown RBP8.26□□□□□ -1.09
CTF19YPL018W DOT5P40553 215 aa8.26□□□□□ -1.09
CTF19YPL018W YMR074CQ04773 145 aa8.26□□□□□ -1.09
CTF19YPL018W YRF1-2P40105 1681 aa8.25□□□□□ -1.09
CTF19YPL018W IOC4Q04213 475 aa8.25□□□□□ -1.09
CTF19YPL018W YDL144CQ07589 356 aa8.25□□□□□ -1.09
CTF19YPL018W ROM2P51862 1356 aaKnown RBP8.24□□□□□ -1.09
CTF19YPL018W COBP00163 385 aa8.23□□□□□ -1.09
CTF19YPL018W MPP10P47083 593 aaKnown RBP8.23□□□□□ -1.09
CTF19YPL018W FOX2Q02207 900 aaKnown RBP8.23□□□□□ -1.09
CTF19YPL018W SIR4P11978 1358 aa8.22□□□□□ -1.09
CTF19YPL018W PRD1P25375 712 aa8.22□□□□□ -1.09
CTF19YPL018W NSR1P27476 414 aaKnown RBP RIP-Chip data8.22□□□□□ -1.09not detected
CTF19YPL018W RPN11P43588 306 aaKnown RBP8.22□□□□□ -1.09
CTF19YPL018W YJL181WP46987 611 aa8.22□□□□□ -1.09
CTF19YPL018W ADE16P54113 591 aaKnown RBP8.22□□□□□ -1.09
CTF19YPL018W CTF4Q01454 927 aa8.22□□□□□ -1.09
CTF19YPL018W FRK1Q03002 865 aaPredicted RBP8.22□□□□□ -1.09
CTF19YPL018W AOS1Q06624 347 aa8.22□□□□□ -1.09
CTF19YPL018W ATG13Q06628 738 aa8.22□□□□□ -1.09
CTF19YPL018W LAM6Q08001 693 aa8.22□□□□□ -1.09
CTF19YPL018W YRF1-4O13559 1382 aa8.21□□□□□ -1.1
CTF19YPL018W SLX5P32828 619 aaKnown RBP8.2□□□□□ -1.1
CTF19YPL018W NTH2P35172 780 aa8.2□□□□□ -1.1
CTF19YPL018W INP54Q08227 384 aaKnown RBP8.2□□□□□ -1.1
CTF19YPL018W RPP0P05317 312 aaKnown RBP8.19□□□□□ -1.1
CTF19YPL018W UBP1P25037 809 aa8.19□□□□□ -1.1
CTF19YPL018W PRP40P33203 583 aaKnown RBP8.19□□□□□ -1.1
CTF19YPL018W THI22Q06490 572 aa8.19□□□□□ -1.1
CTF19YPL018W OSM1P21375 501 aaKnown RBP8.18□□□□□ -1.1
CTF19YPL018W MRM1P25270 412 aa8.17□□□□□ -1.1
CTF19YPL018W TPD3P31383 635 aa8.17□□□□□ -1.1
CTF19YPL018W VPS27P40343 622 aaKnown RBP8.17□□□□□ -1.1
CTF19YPL018W SAP155P43612 1002 aa8.17□□□□□ -1.1
CTF19YPL018W YNL050CP53952 270 aa8.17□□□□□ -1.1
CTF19YPL018W YKR075CP36155 307 aa8.16□□□□□ -1.1
CTF19YPL018W NUP145P49687 1317 aa8.16□□□□□ -1.1
CTF19YPL018W ZDS1P50111 915 aaKnown RBP8.16□□□□□ -1.1
CTF19YPL018W YBP2P53169 641 aa8.16□□□□□ -1.1
CTF19YPL018W APC1P53886 1748 aa8.16□□□□□ -1.1
CTF19YPL018W CDC45Q08032 650 aa8.16□□□□□ -1.1
CTF19YPL018W YIL177CP40434 1758 aa8.15□□□□□ -1.1
CTF19YPL018W YJL225CP40889 1758 aa8.15□□□□□ -1.1
CTF19YPL018W KCC4P25389 1037 aa8.15□□□□□ -1.1
CTF19YPL018W PRS1P32895 427 aaKnown RBP8.15□□□□□ -1.1
CTF19YPL018W RTT109Q07794 436 aa8.15□□□□□ -1.1
CTF19YPL018W SUI2P20459 304 aaKnown RBP8.14□□□□□ -1.11
CTF19YPL018W RRT14P40470 206 aa8.14□□□□□ -1.11
CTF19YPL018W NSE3Q05541 303 aa8.14□□□□□ -1.11
CTF19YPL018W URB1P34241 1764 aaKnown RBP8.14□□□□□ -1.11
CTF19YPL018W FKS3Q04952 1785 aa8.14□□□□□ -1.11
CTF19YPL018W UGA3P26370 528 aa8.13□□□□□ -1.11
CTF19YPL018W YBR287WP38355 427 aa8.13□□□□□ -1.11
CTF19YPL018W NPR2P39923 615 aa8.13□□□□□ -1.11
CTF19YPL018W MAM1P40065 302 aa8.13□□□□□ -1.11
CTF19YPL018W GRX1P25373 110 aaKnown RBP8.12□□□□□ -1.11
CTF19YPL018W GYP7P48365 746 aa8.12□□□□□ -1.11
CTF19YPL018W ALE1Q08548 619 aa8.12□□□□□ -1.11
CTF19YPL018W RVB2Q12464 471 aaKnown RBP8.12□□□□□ -1.11
CTF19YPL018W SNF2P22082 1703 aa8.12□□□□□ -1.11
CTF19YPL018W LYS4P49367 693 aaPredicted RBP8.11□□□□□ -1.11
CTF19YPL018W HEF3P53978 1044 aaKnown RBP8.11□□□□□ -1.11
CTF19YPL018W RMT2Q03305 412 aa8.11□□□□□ -1.11
CTF19YPL018W MSB4Q12317 492 aa8.11□□□□□ -1.11
CTF19YPL018W EDE1P34216 1381 aa8.1□□□□□ -1.11
CTF19YPL018W BMS1Q08965 1183 aaKnown RBP8.1□□□□□ -1.11
CTF19YPL018W COQ4O13525 335 aa8.09□□□□□ -1.11
CTF19YPL018W RAM2P29703 316 aa8.08□□□□□ -1.12
CTF19YPL018W TUM1Q08686 304 aaKnown RBP8.08□□□□□ -1.12
CTF19YPL018W YRF1-3P0CX14 1859 aa8.08□□□□□ -1.12
CTF19YPL018W YRF1-7P0CX15 1859 aa8.08□□□□□ -1.12
CTF19YPL018W YRF1-6P53819 1859 aa8.08□□□□□ -1.12
CTF19YPL018W YRB30P53107 440 aaPredicted RBP8.07□□□□□ -1.12
CTF19YPL018W GRE2Q12068 342 aaKnown RBP8.07□□□□□ -1.12
CTF19YPL018W NOP53Q12080 455 aaKnown RBP8.07□□□□□ -1.12
CTF19YPL018W RAD4P14736 754 aa8.06□□□□□ -1.12
CTF19YPL018W FUN12P39730 1002 aaKnown RBP8.06□□□□□ -1.12
CTF19YPL018W ALD2P47771 506 aa8.06□□□□□ -1.12
CTF19YPL018W SRT1Q03175 343 aa8.06□□□□□ -1.12
CTF19YPL018W UGA2P38067 497 aa8.05□□□□□ -1.12
CTF19YPL018W YBL086CP38177 466 aa8.05□□□□□ -1.12
CTF19YPL018W MAK21Q12176 1025 aaKnown RBP8.05□□□□□ -1.12
CTF19YPL018W BUD27P43573 796 aaKnown RBP RIP-Chip data8.04□□□□□ -1.12not detected
CTF19YPL018W YOL057WQ08225 711 aa8.04□□□□□ -1.12
CTF19YPL018W BUG1Q12191 341 aa8.04□□□□□ -1.12
CTF19YPL018W DAL5P15365 543 aa8.03□□□□□ -1.12
CTF19YPL018W MDG1P53885 366 aa8.03□□□□□ -1.12
CTF19YPL018W ZDS2P54786 942 aa8.03□□□□□ -1.12
CTF19YPL018W NAB6Q03735 1134 aaKnown RBP RIP-Chip data8.03□□□□□ -1.12not detected
CTF19YPL018W VPS64Q03944 604 aa8.03□□□□□ -1.12
CTF19YPL018W SSP2Q08646 371 aa8.03□□□□□ -1.12
CTF19YPL018W RAD2P07276 1031 aa8.02□□□□□ -1.13
CTF19YPL018W SSA2P10592 639 aaKnown RBP8.02□□□□□ -1.13
CTF19YPL018W SER1P33330 395 aaKnown RBP8.02□□□□□ -1.13
CTF19YPL018W VPS29P38759 282 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 30.1 ms