RNA–Protein interactions for RNA: YPL008W

CHL1, Transcript of Probable DNA helicase, yeast

Gene CHL1, Length 2,586 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHL1	YPL008W	YML083C	Q04526	418 aa		5.08	□□□□□ -1.6
CHL1	YPL008W	GRX4	P32642	244 aa		5.08	□□□□□ -1.6
CHL1	YPL008W	YJL007C	P47080	104 aa		5.08	□□□□□ -1.6
CHL1	YPL008W	SCY1	P53009	804 aa		5.08	□□□□□ -1.6
CHL1	YPL008W	CPS1	P27614	576 aa		5.07	□□□□□ -1.6
CHL1	YPL008W	SOL3	P38858	249 aa		5.07	□□□□□ -1.6
CHL1	YPL008W	RTF1	P53064	558 aa		5.07	□□□□□ -1.6
CHL1	YPL008W	RIA1	P53893	1110 aa		5.07	□□□□□ -1.6
CHL1	YPL008W	PDI1	P17967	522 aa	Known RBP	5.07	□□□□□ -1.6
CHL1	YPL008W	MTR4	P47047	1073 aa	Known RBP	5.06	□□□□□ -1.6
CHL1	YPL008W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	5.06	□□□□□ -1.6	not detected
CHL1	YPL008W	NST1	P53935	1240 aa		5.06	□□□□□ -1.6
CHL1	YPL008W	KRE5	P22023	1365 aa		5.06	□□□□□ -1.6
CHL1	YPL008W	DBP1	P24784	617 aa	Known RBP	5.06	□□□□□ -1.6
CHL1	YPL008W	TTI1	P36097	1038 aa		5.06	□□□□□ -1.6
CHL1	YPL008W	VHR2	P40041	505 aa		5.06	□□□□□ -1.6
CHL1	YPL008W	ATF2	P53296	535 aa		5.06	□□□□□ -1.6
CHL1	YPL008W	TYW1	Q08960	810 aa	Known RBP	5.06	□□□□□ -1.6
CHL1	YPL008W	LEU2	P04173	364 aa	Predicted RBP	5.05	□□□□□ -1.6
CHL1	YPL008W	YML133C	Q03099	1374 aa		5.05	□□□□□ -1.6
CHL1	YPL008W	YMR196W	Q04336	1088 aa		5.05	□□□□□ -1.6
CHL1	YPL008W	YLL067C	Q07888	1374 aa		5.05	□□□□□ -1.6
CHL1	YPL008W	YLL066C	Q99208	1374 aa		5.05	□□□□□ -1.6
CHL1	YPL008W	KAR2	P16474	682 aa	Known RBP	5.05	□□□□□ -1.6
CHL1	YPL008W	PCS60	P38137	543 aa	Known RBP RIP-Chip data	5.05	□□□□□ -1.6	not detected
CHL1	YPL008W	FPR3	P38911	411 aa	Known RBP	5.05	□□□□□ -1.6
CHL1	YPL008W	PUP1	P25043	261 aa		5.04	□□□□□ -1.6
CHL1	YPL008W	CSN12	P47130	423 aa		5.04	□□□□□ -1.6
CHL1	YPL008W	YNR029C	P53729	429 aa	Known RBP	5.04	□□□□□ -1.6
CHL1	YPL008W	SSF1	P38789	453 aa	Predicted RBP	5.04	□□□□□ -1.6
CHL1	YPL008W	YFR016C	P43597	1233 aa	Known RBP	5.04	□□□□□ -1.6
CHL1	YPL008W	YDL144C	Q07589	356 aa		5.04	□□□□□ -1.6
CHL1	YPL008W	SNF2	P22082	1703 aa		5.03	□□□□□ -1.6
CHL1	YPL008W	MAP2	P38174	421 aa	Known RBP	5.03	□□□□□ -1.6
CHL1	YPL008W	RCM1	P53972	490 aa		5.03	□□□□□ -1.6
CHL1	YPL008W	ORC6	P38826	435 aa		5.03	□□□□□ -1.6
CHL1	YPL008W	PRP43	P53131	767 aa	Known RBP	5.03	□□□□□ -1.6
CHL1	YPL008W	YEF3	P16521	1044 aa	Known RBP	5.02	□□□□□ -1.61
CHL1	YPL008W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
CHL1	YPL008W	RRN6	P32786	894 aa		5.01	□□□□□ -1.61
CHL1	YPL008W	YRF1-4	O13559	1382 aa		5.01	□□□□□ -1.61
CHL1	YPL008W	TRK1	P12685	1235 aa		5.01	□□□□□ -1.61
CHL1	YPL008W	PPH3	P32345	308 aa		5.01	□□□□□ -1.61
CHL1	YPL008W	BRL1	P38770	471 aa		5.01	□□□□□ -1.61
CHL1	YPL008W	RTR1	P40084	226 aa	Predicted RBP	5.01	□□□□□ -1.61
CHL1	YPL008W	RRP15	Q06511	250 aa	Predicted RBP	5.01	□□□□□ -1.61
CHL1	YPL008W	RVB2	Q12464	471 aa	Known RBP	5.01	□□□□□ -1.61
CHL1	YPL008W	SUP45	P12385	437 aa	Known RBP	5	□□□□□ -1.61
CHL1	YPL008W	PSE1	P32337	1089 aa	Known RBP	5	□□□□□ -1.61
CHL1	YPL008W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
CHL1	YPL008W	RPO41	P13433	1351 aa	Known RBP	5	□□□□□ -1.61
CHL1	YPL008W	ADE6	P38972	1358 aa	Known RBP	5	□□□□□ -1.61
CHL1	YPL008W	SIR4	P11978	1358 aa		5	□□□□□ -1.61
CHL1	YPL008W	HGH1	P48362	394 aa	Known RBP	4.99	□□□□□ -1.61
CHL1	YPL008W	GAP1	P19145	602 aa	Predicted RBP	4.99	□□□□□ -1.61
CHL1	YPL008W	SSA4	P22202	642 aa	Known RBP	4.99	□□□□□ -1.61
CHL1	YPL008W	MRX10	Q05648	414 aa		4.99	□□□□□ -1.61
CHL1	YPL008W	RAD2	P07276	1031 aa		4.98	□□□□□ -1.61
CHL1	YPL008W	PAP2	P53632	584 aa	Known RBP	4.98	□□□□□ -1.61
CHL1	YPL008W	NIS1	P53939	407 aa		4.98	□□□□□ -1.61
CHL1	YPL008W	RGR1	P19263	1082 aa		4.98	□□□□□ -1.61
CHL1	YPL008W	SUI2	P20459	304 aa	Known RBP	4.98	□□□□□ -1.61
CHL1	YPL008W	ALD2	P47771	506 aa		4.98	□□□□□ -1.61
CHL1	YPL008W	SSA2	P10592	639 aa	Known RBP	4.97	□□□□□ -1.61
CHL1	YPL008W	PRD1	P25375	712 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	ATG36	P46983	293 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	MPP10	P47083	593 aa	Known RBP	4.97	□□□□□ -1.61
CHL1	YPL008W	KEX1	P09620	729 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	SCJ1	P25303	377 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	YDJ1	P25491	409 aa	Known RBP	4.97	□□□□□ -1.61
CHL1	YPL008W	CSE4	P36012	229 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	TPS3	P38426	1054 aa	Known RBP	4.97	□□□□□ -1.61
CHL1	YPL008W	OCA5	P38738	679 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	YGR273C	P53329	174 aa		4.97	□□□□□ -1.61
CHL1	YPL008W	AUS1	Q08409	1394 aa		4.96	□□□□□ -1.61
CHL1	YPL008W	RDS2	P19541	446 aa	Known RBP	4.96	□□□□□ -1.62
CHL1	YPL008W	ILV3	P39522	585 aa	Known RBP	4.96	□□□□□ -1.62
CHL1	YPL008W	YNL108C	P53929	270 aa		4.96	□□□□□ -1.62
CHL1	YPL008W	USO1	P25386	1790 aa		4.96	□□□□□ -1.62
CHL1	YPL008W	RTG2	P32608	588 aa	Known RBP	4.96	□□□□□ -1.62
CHL1	YPL008W	SAP155	P43612	1002 aa		4.96	□□□□□ -1.62
CHL1	YPL008W	YPR204W	Q08995	1032 aa		4.96	□□□□□ -1.62
CHL1	YPL008W	RSC30	P38781	883 aa		4.95	□□□□□ -1.62
CHL1	YPL008W	RRP46	P53256	223 aa	Predicted RBP	4.95	□□□□□ -1.62
CHL1	YPL008W	AIM44	Q99299	758 aa		4.95	□□□□□ -1.62
CHL1	YPL008W	APC1	P53886	1748 aa		4.95	□□□□□ -1.62
CHL1	YPL008W	ENO1	P00924	437 aa	Known RBP	4.95	□□□□□ -1.62
CHL1	YPL008W	ATE1	P16639	503 aa		4.95	□□□□□ -1.62
CHL1	YPL008W	YJU3	P28321	313 aa		4.95	□□□□□ -1.62
CHL1	YPL008W	CTF4	Q01454	927 aa		4.95	□□□□□ -1.62
CHL1	YPL008W	ENO2	P00925	437 aa	Known RBP	4.94	□□□□□ -1.62
CHL1	YPL008W	VMA1	P17255	1071 aa	Known RBP	4.94	□□□□□ -1.62
CHL1	YPL008W	MAM1	P40065	302 aa		4.94	□□□□□ -1.62
CHL1	YPL008W	HIM1	Q06674	414 aa		4.94	□□□□□ -1.62
CHL1	YPL008W	YOR238W	Q08634	303 aa		4.94	□□□□□ -1.62
CHL1	YPL008W	DPS1	P04802	557 aa	Known RBP	4.93	□□□□□ -1.62
CHL1	YPL008W	RPS24A	P0CX31	135 aa	Known RBP	4.93	□□□□□ -1.62
CHL1	YPL008W	RPS24B	P0CX32	135 aa	Known RBP	4.93	□□□□□ -1.62
CHL1	YPL008W	MVP1	P40959	511 aa	Known RBP	4.93	□□□□□ -1.62
CHL1	YPL008W	THI22	Q06490	572 aa		4.93	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 45.5 ms