RNA–Protein interactions for RNA: YPL006W

NCR1, Transcript of Vacuolar membrane protein, yeast

Gene NCR1, Length 3,513 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NCR1	YPL006W	TEA1	P47988	759 aa		4.79	□□□□□ -1.64
NCR1	YPL006W	CSI1	Q04368	295 aa		4.79	□□□□□ -1.64
NCR1	YPL006W	MAM1	P40065	302 aa		4.79	□□□□□ -1.64
NCR1	YPL006W	ZDS1	P50111	915 aa	Known RBP	4.79	□□□□□ -1.64
NCR1	YPL006W	NKP2	Q06162	153 aa		4.79	□□□□□ -1.64
NCR1	YPL006W	RPS19A	P07280	144 aa	Known RBP	4.78	□□□□□ -1.64
NCR1	YPL006W	RPS19B	P07281	144 aa	Predicted RBP	4.78	□□□□□ -1.64
NCR1	YPL006W	ECM16	Q04217	1267 aa	Known RBP	4.78	□□□□□ -1.64
NCR1	YPL006W	NOT3	P06102	836 aa	Known RBP	4.78	□□□□□ -1.64
NCR1	YPL006W	YPP1	P46951	817 aa		4.78	□□□□□ -1.64
NCR1	YPL006W	ARL1	P38116	183 aa	Known RBP	4.77	□□□□□ -1.65
NCR1	YPL006W	GCR2	Q01722	534 aa		4.77	□□□□□ -1.65
NCR1	YPL006W	DLD1	P32891	587 aa		4.77	□□□□□ -1.65
NCR1	YPL006W	YNG2	P38806	282 aa	Known RBP	4.77	□□□□□ -1.65
NCR1	YPL006W	RAD50	P12753	1312 aa		4.77	□□□□□ -1.65
NCR1	YPL006W	NUP145	P49687	1317 aa		4.77	□□□□□ -1.65
NCR1	YPL006W	ITC1	P53125	1264 aa		4.77	□□□□□ -1.65
NCR1	YPL006W	SPO1	P53541	631 aa		4.77	□□□□□ -1.65
NCR1	YPL006W	SRS2	P12954	1174 aa		4.76	□□□□□ -1.65
NCR1	YPL006W	BRN1	P38170	754 aa		4.76	□□□□□ -1.65
NCR1	YPL006W	TCB2	P48231	1178 aa		4.76	□□□□□ -1.65
NCR1	YPL006W	HAP5	Q02516	242 aa		4.76	□□□□□ -1.65
NCR1	YPL006W	BMS1	Q08965	1183 aa	Known RBP	4.76	□□□□□ -1.65
NCR1	YPL006W	COQ4	O13525	335 aa		4.75	□□□□□ -1.65
NCR1	YPL006W	CDC16	P09798	840 aa		4.75	□□□□□ -1.65
NCR1	YPL006W	URB1	P34241	1764 aa	Known RBP	4.75	□□□□□ -1.65
NCR1	YPL006W	YBR287W	P38355	427 aa		4.75	□□□□□ -1.65
NCR1	YPL006W	RFC1	P38630	861 aa	Known RBP	4.75	□□□□□ -1.65
NCR1	YPL006W	DUR1,2	P32528	1835 aa	Known RBP	4.74	□□□□□ -1.65
NCR1	YPL006W	GCD7	P32502	381 aa	Predicted RBP	4.74	□□□□□ -1.65
NCR1	YPL006W	HXT13	P39924	564 aa		4.74	□□□□□ -1.65
NCR1	YPL006W	ROM2	P51862	1356 aa	Known RBP	4.74	□□□□□ -1.65
NCR1	YPL006W	HSP104	P31539	908 aa	Known RBP	4.74	□□□□□ -1.65
NCR1	YPL006W	NMD2	P38798	1089 aa	Known RBP	4.74	□□□□□ -1.65
NCR1	YPL006W	FKS3	Q04952	1785 aa		4.74	□□□□□ -1.65
NCR1	YPL006W	YGR122W	P53272	402 aa		4.73	□□□□□ -1.65
NCR1	YPL006W	HXT17	P53631	564 aa		4.73	□□□□□ -1.65
NCR1	YPL006W	RAD24	P32641	659 aa		4.73	□□□□□ -1.65
NCR1	YPL006W	NPA3	P47122	385 aa		4.73	□□□□□ -1.65
NCR1	YPL006W	TRL1	P09880	827 aa	Known RBP	4.72	□□□□□ -1.65
NCR1	YPL006W	BDH2	P39713	417 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	CIR1	P42940	261 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	CTR9	P89105	1077 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	CTF4	Q01454	927 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	AOS1	Q06624	347 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	KRE33	P53914	1056 aa	Known RBP	4.72	□□□□□ -1.65
NCR1	YPL006W	LYS2	P07702	1392 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	YOL057W	Q08225	711 aa		4.72	□□□□□ -1.65
NCR1	YPL006W	YDR306C	Q06640	478 aa		4.71	□□□□□ -1.65
NCR1	YPL006W	BOI2	P39969	1040 aa		4.71	□□□□□ -1.66
NCR1	YPL006W	PIL1	P53252	339 aa	Known RBP	4.71	□□□□□ -1.66
NCR1	YPL006W	VPS20	Q04272	221 aa		4.71	□□□□□ -1.66
NCR1	YPL006W	UGA3	P26370	528 aa		4.7	□□□□□ -1.66
NCR1	YPL006W	RKM3	P38222	552 aa		4.7	□□□□□ -1.66
NCR1	YPL006W	HRQ1	Q05549	1077 aa		4.7	□□□□□ -1.66
NCR1	YPL006W	SWC3	P31376	625 aa		4.7	□□□□□ -1.66
NCR1	YPL006W	HST1	P53685	503 aa		4.7	□□□□□ -1.66
NCR1	YPL006W	LCD1	Q04377	747 aa		4.7	□□□□□ -1.66
NCR1	YPL006W	RSC1	P53236	928 aa		4.69	□□□□□ -1.66
NCR1	YPL006W	NSE3	Q05541	303 aa		4.69	□□□□□ -1.66
NCR1	YPL006W	RAD4	P14736	754 aa		4.69	□□□□□ -1.66
NCR1	YPL006W	HYR1	P40581	163 aa	Known RBP	4.69	□□□□□ -1.66
NCR1	YPL006W	HGH1	P48362	394 aa	Known RBP	4.69	□□□□□ -1.66
NCR1	YPL006W	SLM3	Q12093	417 aa		4.69	□□□□□ -1.66
NCR1	YPL006W	MRP7	P12687	371 aa		4.69	□□□□□ -1.66
NCR1	YPL006W	COG8	Q04632	607 aa		4.69	□□□□□ -1.66
NCR1	YPL006W	VAS1	P07806	1104 aa	Known RBP	4.68	□□□□□ -1.66
NCR1	YPL006W	RNR2	P09938	399 aa	Known RBP	4.68	□□□□□ -1.66
NCR1	YPL006W	KCC4	P25389	1037 aa		4.68	□□□□□ -1.66
NCR1	YPL006W	RPN12	P32496	274 aa		4.68	□□□□□ -1.66
NCR1	YPL006W	RCR1	P38212	213 aa		4.68	□□□□□ -1.66
NCR1	YPL006W	RVS167	P39743	482 aa	Known RBP	4.68	□□□□□ -1.66
NCR1	YPL006W	YMR196W	Q04336	1088 aa		4.68	□□□□□ -1.66
NCR1	YPL006W	PRP5	P21372	849 aa	Predicted RBP	4.67	□□□□□ -1.66
NCR1	YPL006W	MSB3	P48566	633 aa	Predicted RBP	4.67	□□□□□ -1.66
NCR1	YPL006W	NOP8	Q08287	484 aa	Predicted RBP	4.67	□□□□□ -1.66
NCR1	YPL006W	AIM44	Q99299	758 aa		4.67	□□□□□ -1.66
NCR1	YPL006W	YJR008W	P47085	338 aa		4.67	□□□□□ -1.66
NCR1	YPL006W	ZDS2	P54786	942 aa		4.67	□□□□□ -1.66
NCR1	YPL006W	INP54	Q08227	384 aa	Known RBP	4.67	□□□□□ -1.66
NCR1	YPL006W	MNN4	P36044	1178 aa		4.67	□□□□□ -1.66
NCR1	YPL006W	AAP1	P37898	856 aa	Known RBP	4.67	□□□□□ -1.66
NCR1	YPL006W	KEX1	P09620	729 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	BIK1	P11709	440 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	THI12	P42883	340 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	THI5	P43534	340 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	THI11	P47183	340 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	THI13	Q07748	340 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	MBR1	P23493	339 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	MCM2	P29469	868 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	AIM9	P40053	627 aa	Known RBP	4.66	□□□□□ -1.66
NCR1	YPL006W	BDP1	P46678	594 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	SWI1	P09547	1314 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	ECM21	P38167	1117 aa	Known RBP	4.66	□□□□□ -1.66
NCR1	YPL006W	YGL081W	P53156	320 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	RIM20	Q12033	661 aa		4.66	□□□□□ -1.66
NCR1	YPL006W	MDG1	P53885	366 aa		4.65	□□□□□ -1.66
NCR1	YPL006W	XKS1	P42826	600 aa		4.65	□□□□□ -1.67
NCR1	YPL006W	MRPS35	P53292	345 aa		4.65	□□□□□ -1.67
NCR1	YPL006W	DNM1	P54861	757 aa		4.65	□□□□□ -1.67

Retrieved 100 of 5,963 RNA–protein pairs in 90.4 ms