RNA–Protein interactions for RNA: YOR304W

ISW2, Transcript of ATP-dependent DNA translocase involved in chromatin remodeling, yeast

Gene ISW2, Length 3,363 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ISW2	YOR304W	NAF1	P53919	492 aa	Known RBP	4.91	□□□□□ -1.62
ISW2	YOR304W	SVL3	Q03088	825 aa	Known RBP	4.91	□□□□□ -1.62
ISW2	YOR304W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.62	not detected
ISW2	YOR304W	ACS2	P52910	683 aa	Known RBP	4.9	□□□□□ -1.62
ISW2	YOR304W	YOL057W	Q08225	711 aa		4.9	□□□□□ -1.62
ISW2	YOR304W	SUV3	P32580	737 aa		4.9	□□□□□ -1.63
ISW2	YOR304W	PPG1	P32838	368 aa		4.9	□□□□□ -1.63
ISW2	YOR304W	FPR3	P38911	411 aa	Known RBP	4.9	□□□□□ -1.63
ISW2	YOR304W	TOS4	Q06266	489 aa		4.9	□□□□□ -1.63
ISW2	YOR304W	BDF2	Q07442	638 aa		4.9	□□□□□ -1.63
ISW2	YOR304W	SSB1	P11484	613 aa	Known RBP	4.9	□□□□□ -1.63
ISW2	YOR304W	SSB2	P40150	613 aa	Known RBP	4.9	□□□□□ -1.63
ISW2	YOR304W	TPM2	P40414	161 aa		4.9	□□□□□ -1.63
ISW2	YOR304W	QDR1	P40475	563 aa		4.9	□□□□□ -1.63
ISW2	YOR304W	UBP10	P53874	792 aa	Predicted RBP	4.9	□□□□□ -1.63
ISW2	YOR304W	PHO4	P07270	312 aa	Known RBP	4.89	□□□□□ -1.63
ISW2	YOR304W	MCM2	P29469	868 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	KTR2	P33550	425 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	BOI1	P38041	980 aa	Known RBP	4.89	□□□□□ -1.63
ISW2	YOR304W	ACF4	P47129	309 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	YJR142W	P47173	342 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	YMR196W	Q04336	1088 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	YPR084W	Q06821	456 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	SLI15	P38283	698 aa		4.89	□□□□□ -1.63
ISW2	YOR304W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.88	□□□□□ -1.63	not detected
ISW2	YOR304W	SRP40	P32583	406 aa	Predicted RBP	4.88	□□□□□ -1.63
ISW2	YOR304W	YKL091C	P33324	310 aa	Known RBP	4.87	□□□□□ -1.63
ISW2	YOR304W	DAK2	P43550	591 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	MPH3	P0CE00	602 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	UBP12	P39538	1254 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	TFG1	P41895	735 aa	Predicted RBP	4.87	□□□□□ -1.63
ISW2	YOR304W	TRM1	P15565	570 aa	Known RBP	4.87	□□□□□ -1.63
ISW2	YOR304W	MIP1	P15801	1254 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	THI12	P42883	340 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	THI5	P43534	340 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	EMP47	P43555	445 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	THI11	P47183	340 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
ISW2	YOR304W	CSC1	Q06538	782 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	THI13	Q07748	340 aa		4.87	□□□□□ -1.63
ISW2	YOR304W	AI4	P03878	556 aa		4.86	□□□□□ -1.63
ISW2	YOR304W	PHO87	P25360	923 aa		4.86	□□□□□ -1.63
ISW2	YOR304W	SLX5	P32828	619 aa	Known RBP	4.85	□□□□□ -1.63
ISW2	YOR304W	YPP1	P46951	817 aa		4.85	□□□□□ -1.63
ISW2	YOR304W	SLY41	P22215	453 aa		4.85	□□□□□ -1.63
ISW2	YOR304W	CDC73	Q06697	393 aa		4.85	□□□□□ -1.63
ISW2	YOR304W	MGE1	P38523	228 aa		4.85	□□□□□ -1.63
ISW2	YOR304W	LSO1	Q3E827	93 aa		4.85	□□□□□ -1.63
ISW2	YOR304W	SRS2	P12954	1174 aa		4.84	□□□□□ -1.63
ISW2	YOR304W	GLO3	P38682	493 aa	Known RBP	4.84	□□□□□ -1.63
ISW2	YOR304W	YHR020W	P38708	688 aa	Known RBP	4.84	□□□□□ -1.63
ISW2	YOR304W	ERF2	Q06551	359 aa		4.84	□□□□□ -1.63
ISW2	YOR304W	ISW1	P38144	1129 aa		4.84	□□□□□ -1.64
ISW2	YOR304W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.64	not detected
ISW2	YOR304W	YOL036W	Q08206	761 aa		4.84	□□□□□ -1.64
ISW2	YOR304W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
ISW2	YOR304W	RPA135	P22138	1203 aa	Known RBP	4.83	□□□□□ -1.64
ISW2	YOR304W	TUB4	P53378	473 aa		4.83	□□□□□ -1.64
ISW2	YOR304W	FRA1	Q07825	749 aa		4.83	□□□□□ -1.64
ISW2	YOR304W	RPT1	P33299	467 aa	Known RBP	4.83	□□□□□ -1.64
ISW2	YOR304W	MNN1	P39106	762 aa		4.83	□□□□□ -1.64
ISW2	YOR304W	YJL049W	P47048	450 aa		4.82	□□□□□ -1.64
ISW2	YOR304W	BRE1	Q07457	700 aa	Known RBP	4.82	□□□□□ -1.64
ISW2	YOR304W	CDC11	P32458	415 aa		4.82	□□□□□ -1.64
ISW2	YOR304W	YNL115C	P53925	644 aa		4.82	□□□□□ -1.64
ISW2	YOR304W	AGE1	Q04412	482 aa		4.82	□□□□□ -1.64
ISW2	YOR304W	POB3	Q04636	552 aa	Known RBP	4.82	□□□□□ -1.64
ISW2	YOR304W	HUL5	P53119	910 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	TRS120	Q04183	1289 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	YDL121C	Q07541	149 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	GRX1	P25373	110 aa	Known RBP	4.81	□□□□□ -1.64
ISW2	YOR304W	TUM1	Q08686	304 aa	Known RBP	4.81	□□□□□ -1.64
ISW2	YOR304W	TFB4	Q12004	338 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	APC11	Q12157	165 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	GYP5	Q12344	894 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	FUR4	P05316	633 aa	Known RBP	4.81	□□□□□ -1.64
ISW2	YOR304W	HAL5	P38970	855 aa	Known RBP	4.81	□□□□□ -1.64
ISW2	YOR304W	DNM1	P54861	757 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	PUN1	Q06991	263 aa		4.81	□□□□□ -1.64
ISW2	YOR304W	CYC8	P14922	966 aa		4.8	□□□□□ -1.64
ISW2	YOR304W	ESF1	Q06344	628 aa	Known RBP	4.8	□□□□□ -1.64
ISW2	YOR304W	CDC53	Q12018	815 aa	Known RBP	4.8	□□□□□ -1.64
ISW2	YOR304W	HAP4	P14064	554 aa		4.8	□□□□□ -1.64
ISW2	YOR304W	VMA4	P22203	233 aa	Known RBP	4.8	□□□□□ -1.64
ISW2	YOR304W	RPS26A	P39938	119 aa	Known RBP	4.8	□□□□□ -1.64
ISW2	YOR304W	RPS26B	P39939	119 aa	Known RBP	4.8	□□□□□ -1.64
ISW2	YOR304W	BOI2	P39969	1040 aa		4.8	□□□□□ -1.64
ISW2	YOR304W	GAL11	P19659	1081 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	TIM23	P32897	222 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	DUT1	P33317	147 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	FUI1	P38196	639 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
ISW2	YOR304W	DAN4	P47179	1161 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	TSC13	Q99190	310 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	NUP82	P40368	713 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	YAP5	P40574	245 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	ENV9	Q08651	330 aa		4.79	□□□□□ -1.64
ISW2	YOR304W	BUD31	P25337	157 aa	Predicted RBP	4.78	□□□□□ -1.64
ISW2	YOR304W	SEC6	P32844	805 aa		4.78	□□□□□ -1.64
ISW2	YOR304W	FIG4	P42837	879 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 43.6 ms