RNA–Protein interactions for RNA: YOR003W

YSP3, Transcript of Putative precursor to the subtilisin-like protease III, yeastyeast

Gene YSP3, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YSP3YOR003W ATG13Q06628 738 aa13.89□□□□□ -0.19
YSP3YOR003W INP54Q08227 384 aaKnown RBP13.89□□□□□ -0.19
YSP3YOR003W SPT7P35177 1332 aa13.88□□□□□ -0.19
YSP3YOR003W HSP104P31539 908 aaKnown RBP13.88□□□□□ -0.19
YSP3YOR003W PRY3P47033 881 aa13.86□□□□□ -0.19
YSP3YOR003W OSM1P21375 501 aaKnown RBP13.85□□□□□ -0.19
YSP3YOR003W AKL1P38080 1108 aaKnown RBP13.85□□□□□ -0.19
YSP3YOR003W CTH1P47976 325 aa13.83□□□□□ -0.2
YSP3YOR003W RRP46P53256 223 aaPredicted RBP13.83□□□□□ -0.2
YSP3YOR003W ALD2P47771 506 aa13.81□□□□□ -0.2
YSP3YOR003W NUP145P49687 1317 aa13.81□□□□□ -0.2
YSP3YOR003W SSA2P10592 639 aaKnown RBP13.81□□□□□ -0.2
YSP3YOR003W UGA2P38067 497 aa13.81□□□□□ -0.2
YSP3YOR003W TSR3Q12094 313 aaKnown RBP13.81□□□□□ -0.2
YSP3YOR003W GTT3P39996 337 aa13.78□□□□□ -0.2
YSP3YOR003W YBP2P53169 641 aa13.77□□□□□ -0.21
YSP3YOR003W MSB4Q12317 492 aa13.77□□□□□ -0.21
YSP3YOR003W CTF4Q01454 927 aa13.76□□□□□ -0.21
YSP3YOR003W AOS1Q06624 347 aa13.76□□□□□ -0.21
YSP3YOR003W NTH2P35172 780 aa13.74□□□□□ -0.21
YSP3YOR003W RTR1P40084 226 aaPredicted RBP13.74□□□□□ -0.21
YSP3YOR003W GRX1P25373 110 aaKnown RBP13.73□□□□□ -0.21
YSP3YOR003W TUM1Q08686 304 aaKnown RBP13.73□□□□□ -0.21
YSP3YOR003W GRE2Q12068 342 aaKnown RBP13.73□□□□□ -0.21
YSP3YOR003W BDF1P35817 686 aa13.7□□□□□ -0.22
YSP3YOR003W PRD1P25375 712 aa13.68□□□□□ -0.22
YSP3YOR003W KCC4P25389 1037 aa13.68□□□□□ -0.22
YSP3YOR003W ALE1Q08548 619 aa13.68□□□□□ -0.22
YSP3YOR003W BUG1Q12191 341 aa13.68□□□□□ -0.22
YSP3YOR003W RAD4P14736 754 aa13.67□□□□□ -0.22
YSP3YOR003W MPP10P47083 593 aaKnown RBP13.66□□□□□ -0.22
YSP3YOR003W ALD3P54114 506 aa13.66□□□□□ -0.22
YSP3YOR003W RMT2Q03305 412 aa13.64□□□□□ -0.23
YSP3YOR003W YNL050CP53952 270 aa13.64□□□□□ -0.23
YSP3YOR003W THI22Q06490 572 aa13.63□□□□□ -0.23
YSP3YOR003W IOC4Q04213 475 aa13.62□□□□□ -0.23
YSP3YOR003W BUD27P43573 796 aaKnown RBP RIP-Chip data13.61□□□□□ -0.23not detected
YSP3YOR003W YDL144CQ07589 356 aa13.61□□□□□ -0.23
YSP3YOR003W NOP53Q12080 455 aaKnown RBP13.6□□□□□ -0.23
YSP3YOR003W YBR287WP38355 427 aa13.59□□□□□ -0.23
YSP3YOR003W UGA3P26370 528 aa13.58□□□□□ -0.24
YSP3YOR003W ZDS1P50111 915 aaKnown RBP13.58□□□□□ -0.24
YSP3YOR003W UTP22P53254 1237 aaPredicted RBP13.58□□□□□ -0.24
YSP3YOR003W HPC2Q01448 625 aa13.58□□□□□ -0.24
YSP3YOR003W RTT109Q07794 436 aa13.58□□□□□ -0.24
YSP3YOR003W NYV1Q12255 253 aa13.58□□□□□ -0.24
YSP3YOR003W TOS1P38288 455 aa13.57□□□□□ -0.24
YSP3YOR003W TEA1P47988 759 aa13.57□□□□□ -0.24
YSP3YOR003W NSE3Q05541 303 aa13.57□□□□□ -0.24
YSP3YOR003W RIX7Q07844 837 aaKnown RBP13.56□□□□□ -0.24
YSP3YOR003W RRT14P40470 206 aa13.56□□□□□ -0.24
YSP3YOR003W CTI6Q08923 506 aa13.56□□□□□ -0.24
YSP3YOR003W TPD3P31383 635 aa13.55□□□□□ -0.24
YSP3YOR003W COQ4O13525 335 aa13.54□□□□□ -0.24
YSP3YOR003W SER1P33330 395 aaKnown RBP13.54□□□□□ -0.24
YSP3YOR003W SAP155P43612 1002 aa13.54□□□□□ -0.24
YSP3YOR003W BMS1Q08965 1183 aaKnown RBP13.54□□□□□ -0.24
YSP3YOR003W EAF6P47128 113 aa13.53□□□□□ -0.24
YSP3YOR003W SPT21P35209 758 aa13.52□□□□□ -0.25
YSP3YOR003W MAM1P40065 302 aa13.52□□□□□ -0.25
YSP3YOR003W YGL082WP53155 381 aa13.52□□□□□ -0.25
YSP3YOR003W UTP10P42945 1769 aaKnown RBP13.52□□□□□ -0.25
YSP3YOR003W HEF3P53978 1044 aaKnown RBP13.51□□□□□ -0.25
YSP3YOR003W ZDS2P54786 942 aa13.51□□□□□ -0.25
YSP3YOR003W PHM7Q12252 991 aa13.51□□□□□ -0.25
YSP3YOR003W YFR016CP43597 1233 aaKnown RBP13.5□□□□□ -0.25
YSP3YOR003W APL2P36000 726 aaPredicted RBP13.49□□□□□ -0.25
YSP3YOR003W GYP7P48365 746 aa13.49□□□□□ -0.25
YSP3YOR003W MDG1P53885 366 aa13.49□□□□□ -0.25
YSP3YOR003W SSP2Q08646 371 aa13.49□□□□□ -0.25
YSP3YOR003W MSN5P52918 1224 aa13.48□□□□□ -0.25
YSP3YOR003W VPS64Q03944 604 aa13.48□□□□□ -0.25
YSP3YOR003W SUI2P20459 304 aaKnown RBP13.47□□□□□ -0.25
YSP3YOR003W LYS2P07702 1392 aa13.46□□□□□ -0.26
YSP3YOR003W DCD1P06773 312 aa13.46□□□□□ -0.26
YSP3YOR003W ARG8P18544 423 aa13.46□□□□□ -0.26
YSP3YOR003W LPD1P09624 499 aaKnown RBP13.45□□□□□ -0.26
YSP3YOR003W SSA1P10591 642 aaKnown RBP13.43□□□□□ -0.26
YSP3YOR003W YOL057WQ08225 711 aa13.43□□□□□ -0.26
YSP3YOR003W YPR204WQ08995 1032 aa13.43□□□□□ -0.26
YSP3YOR003W SRT1Q03175 343 aa13.42□□□□□ -0.26
YSP3YOR003W RPP0P05317 312 aaKnown RBP13.41□□□□□ -0.26
YSP3YOR003W RIM101P33400 625 aa13.41□□□□□ -0.26
YSP3YOR003W VPS27P40343 622 aaKnown RBP13.4□□□□□ -0.26
YSP3YOR003W CWH41P53008 833 aa13.4□□□□□ -0.26
YSP3YOR003W RAT1Q02792 1006 aaKnown RBP13.39□□□□□ -0.27
YSP3YOR003W CTT1P06115 562 aa13.38□□□□□ -0.27
YSP3YOR003W ERT1P38140 529 aa13.37□□□□□ -0.27
YSP3YOR003W KIN4Q01919 800 aa13.37□□□□□ -0.27
YSP3YOR003W CAF20P12962 161 aaKnown RBP13.36□□□□□ -0.27
YSP3YOR003W YKL222CP35995 705 aa13.36□□□□□ -0.27
YSP3YOR003W CDC45Q08032 650 aa13.36□□□□□ -0.27
YSP3YOR003W PMD1P32634 1753 aa13.36□□□□□ -0.27
YSP3YOR003W YER156CP40093 338 aaKnown RBP13.35□□□□□ -0.27
YSP3YOR003W BDF2Q07442 638 aa13.35□□□□□ -0.27
YSP3YOR003W RVB2Q12464 471 aaKnown RBP13.35□□□□□ -0.27
YSP3YOR003W SMY1P32364 656 aaKnown RBP13.34□□□□□ -0.27
YSP3YOR003W PFF1P38244 976 aa13.34□□□□□ -0.27
YSP3YOR003W YGR122WP53272 402 aa13.34□□□□□ -0.27
YSP3YOR003W PKH1Q03407 766 aa13.34□□□□□ -0.27
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms