RNA–Protein interactions for RNA: YNR018W

RCF2, Transcript of Cytochrome c oxidase subunit, yeastyeast

Gene RCF2, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RCF2YNR018W YPP1P46951 817 aa9.05□□□□□ -0.96
RCF2YNR018W HSP104P31539 908 aaKnown RBP9.04□□□□□ -0.96
RCF2YNR018W THI12P42883 340 aa9.04□□□□□ -0.96
RCF2YNR018W THI5P43534 340 aa9.04□□□□□ -0.96
RCF2YNR018W THI11P47183 340 aa9.04□□□□□ -0.96
RCF2YNR018W TCB2P48231 1178 aa9.04□□□□□ -0.96
RCF2YNR018W CTF4Q01454 927 aa9.04□□□□□ -0.96
RCF2YNR018W AOS1Q06624 347 aa9.04□□□□□ -0.96
RCF2YNR018W THI13Q07748 340 aa9.04□□□□□ -0.96
RCF2YNR018W BMS1Q08965 1183 aaKnown RBP9.04□□□□□ -0.96
RCF2YNR018W YBR287WP38355 427 aa9.03□□□□□ -0.96
RCF2YNR018W CSI1Q04368 295 aa9.03□□□□□ -0.96
RCF2YNR018W RPS19AP07280 144 aaKnown RBP9.02□□□□□ -0.97
RCF2YNR018W RPS19BP07281 144 aaPredicted RBP9.02□□□□□ -0.97
RCF2YNR018W ROX1P25042 368 aa9.02□□□□□ -0.97
RCF2YNR018W YNG2P38806 282 aaKnown RBP9.02□□□□□ -0.97
RCF2YNR018W COQ4O13525 335 aa9.01□□□□□ -0.97
RCF2YNR018W SLM3Q12093 417 aa9.01□□□□□ -0.97
RCF2YNR018W LYS2P07702 1392 aa9□□□□□ -0.97
RCF2YNR018W PRP5P21372 849 aaPredicted RBP9□□□□□ -0.97
RCF2YNR018W VPS24P36095 224 aaKnown RBP9□□□□□ -0.97
RCF2YNR018W SPO1P53541 631 aa9□□□□□ -0.97
RCF2YNR018W UGA3P26370 528 aa8.99□□□□□ -0.97
RCF2YNR018W NKP2Q06162 153 aa8.99□□□□□ -0.97
RCF2YNR018W RAD50P12753 1312 aa8.99□□□□□ -0.97
RCF2YNR018W YRF1-3P0CX14 1859 aa8.98□□□□□ -0.97
RCF2YNR018W YRF1-7P0CX15 1859 aa8.98□□□□□ -0.97
RCF2YNR018W YRF1-6P53819 1859 aa8.98□□□□□ -0.97
RCF2YNR018W DJP1P40564 432 aa8.98□□□□□ -0.97
RCF2YNR018W PRY3P47033 881 aa8.98□□□□□ -0.97
RCF2YNR018W NSE3Q05541 303 aa8.98□□□□□ -0.97
RCF2YNR018W LSP1Q12230 341 aaKnown RBP8.98□□□□□ -0.97
RCF2YNR018W DUR1,2P32528 1835 aaKnown RBP8.98□□□□□ -0.97
RCF2YNR018W MNN4P36044 1178 aa8.97□□□□□ -0.97
RCF2YNR018W MSB3P48566 633 aaPredicted RBP8.97□□□□□ -0.97
RCF2YNR018W RLF2Q12495 606 aa8.97□□□□□ -0.97
RCF2YNR018W KCC4P25389 1037 aa8.96□□□□□ -0.98
RCF2YNR018W PRP45P28004 379 aaPredicted RBP8.96□□□□□ -0.98
RCF2YNR018W NMD2P38798 1089 aaKnown RBP8.96□□□□□ -0.98
RCF2YNR018W YOL057WQ08225 711 aa8.96□□□□□ -0.98
RCF2YNR018W PRI1P10363 409 aa8.95□□□□□ -0.98
RCF2YNR018W RAD24P32641 659 aa8.95□□□□□ -0.98
RCF2YNR018W AVT3P36062 692 aa8.95□□□□□ -0.98
RCF2YNR018W RFC1P38630 861 aaKnown RBP8.95□□□□□ -0.98
RCF2YNR018W MSP1P28737 362 aa8.94□□□□□ -0.98
RCF2YNR018W GCD7P32502 381 aaPredicted RBP8.94□□□□□ -0.98
RCF2YNR018W DLD1P32891 587 aa8.94□□□□□ -0.98
RCF2YNR018W RCR1P38212 213 aa8.94□□□□□ -0.98
RCF2YNR018W GCR2Q01722 534 aa8.94□□□□□ -0.98
RCF2YNR018W NOP8Q08287 484 aaPredicted RBP8.94□□□□□ -0.98
RCF2YNR018W NUP145P49687 1317 aa8.94□□□□□ -0.98
RCF2YNR018W CDC16P09798 840 aa8.93□□□□□ -0.98
RCF2YNR018W XKS1P42826 600 aa8.93□□□□□ -0.98
RCF2YNR018W YGR122WP53272 402 aa8.93□□□□□ -0.98
RCF2YNR018W YDR306CQ06640 478 aa8.93□□□□□ -0.98
RCF2YNR018W ROM2P51862 1356 aaKnown RBP8.93□□□□□ -0.98
RCF2YNR018W MRP7P12687 371 aa8.92□□□□□ -0.98
RCF2YNR018W RAD4P14736 754 aa8.92□□□□□ -0.98
RCF2YNR018W SLN1P39928 1220 aaPredicted RBP8.92□□□□□ -0.98
RCF2YNR018W HGH1P48362 394 aaKnown RBP8.92□□□□□ -0.98
RCF2YNR018W ITC1P53125 1264 aa8.92□□□□□ -0.98
RCF2YNR018W INP54Q08227 384 aaKnown RBP8.92□□□□□ -0.98
RCF2YNR018W TCB1Q12466 1186 aa8.92□□□□□ -0.98
RCF2YNR018W SRS2P12954 1174 aa8.91□□□□□ -0.98
RCF2YNR018W BRN1P38170 754 aa8.91□□□□□ -0.98
RCF2YNR018W BOI2P39969 1040 aa8.91□□□□□ -0.98
RCF2YNR018W PTP3P40048 928 aa8.91□□□□□ -0.98
RCF2YNR018W RPS0BP46654 252 aaKnown RBP8.91□□□□□ -0.98
RCF2YNR018W RSF2P46974 1380 aa8.89□□□□□ -0.99
RCF2YNR018W AAD16Q02895 342 aa8.89□□□□□ -0.99
RCF2YNR018W ARL1P38116 183 aaKnown RBP8.88□□□□□ -0.99
RCF2YNR018W TEA1P47988 759 aa8.88□□□□□ -0.99
RCF2YNR018W SWC3P31376 625 aa8.87□□□□□ -0.99
RCF2YNR018W HXT13P39924 564 aa8.87□□□□□ -0.99
RCF2YNR018W HXT17P53631 564 aa8.86□□□□□ -0.99
RCF2YNR018W ZDS2P54786 942 aa8.86□□□□□ -0.99
RCF2YNR018W DNM1P54861 757 aa8.86□□□□□ -0.99
RCF2YNR018W ALE1Q08548 619 aa8.86□□□□□ -0.99
RCF2YNR018W ISW2Q08773 1120 aa8.86□□□□□ -0.99
RCF2YNR018W RIM15P43565 1770 aa8.86□□□□□ -0.99
RCF2YNR018W CST6P40535 587 aa8.85□□□□□ -0.99
RCF2YNR018W BDP1P46678 594 aa8.85□□□□□ -0.99
RCF2YNR018W YJR008WP47085 338 aa8.85□□□□□ -0.99
RCF2YNR018W VAS1P07806 1104 aaKnown RBP8.84□□□□□ -0.99
RCF2YNR018W KNS1P32350 737 aaPredicted RBP8.84□□□□□ -0.99
RCF2YNR018W NUP133P36161 1157 aa8.84□□□□□ -0.99
RCF2YNR018W HAP5Q02516 242 aa8.84□□□□□ -0.99
RCF2YNR018W MEC3Q02574 474 aa8.84□□□□□ -0.99
RCF2YNR018W SWI1P09547 1314 aa8.83□□□□□ -1
RCF2YNR018W OSM1P21375 501 aaKnown RBP8.83□□□□□ -1
RCF2YNR018W ADE16P54113 591 aaKnown RBP8.83□□□□□ -1
RCF2YNR018W UTP10P42945 1769 aaKnown RBP8.82□□□□□ -1
RCF2YNR018W QCR6P00127 147 aa8.82□□□□□ -1
RCF2YNR018W TRL1P09880 827 aaKnown RBP8.82□□□□□ -1
RCF2YNR018W RNR2P09938 399 aaKnown RBP8.82□□□□□ -1
RCF2YNR018W NPA3P47122 385 aa8.82□□□□□ -1
RCF2YNR018W DIP2Q12220 943 aaPredicted RBP8.82□□□□□ -1
RCF2YNR018W NOT3P06102 836 aaKnown RBP8.81□□□□□ -1
RCF2YNR018W MIF2P35201 549 aa8.81□□□□□ -1
RCF2YNR018W BDH2P39713 417 aa8.81□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms