RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W HST2P53686 357 aa6.76□□□□□ -1.33
SWM2YNR004W DLD1P32891 587 aa6.75□□□□□ -1.33
SWM2YNR004W PUS1Q12211 544 aaKnown RBP6.75□□□□□ -1.33
SWM2YNR004W VAC17P25591 423 aa6.74□□□□□ -1.33
SWM2YNR004W YBL086CP38177 466 aa6.74□□□□□ -1.33
SWM2YNR004W YJR098CP47139 656 aa6.74□□□□□ -1.33
SWM2YNR004W MMP1Q12372 583 aa6.74□□□□□ -1.33
SWM2YNR004W SPB4P25808 606 aaPredicted RBP6.73□□□□□ -1.33
SWM2YNR004W ICP55P40051 511 aa6.73□□□□□ -1.33
SWM2YNR004W ROG3P43602 733 aa6.73□□□□□ -1.33
SWM2YNR004W TCB1Q12466 1186 aa6.73□□□□□ -1.33
SWM2YNR004W DPH6Q12429 685 aa6.72□□□□□ -1.33
SWM2YNR004W LSB3P43603 459 aaKnown RBP6.7□□□□□ -1.34
SWM2YNR004W APP1P53933 587 aa6.7□□□□□ -1.34
SWM2YNR004W TY1A-MR1Q04215 440 aa6.7□□□□□ -1.34
SWM2YNR004W GLN1P32288 370 aaKnown RBP6.69□□□□□ -1.34
SWM2YNR004W ESS1P22696 170 aa6.68□□□□□ -1.34
SWM2YNR004W OSH7P38755 437 aa6.68□□□□□ -1.34
SWM2YNR004W SAS10Q12136 610 aaPredicted RBP6.68□□□□□ -1.34
SWM2YNR004W PHM7Q12252 991 aa6.67□□□□□ -1.34
SWM2YNR004W ITT1Q04638 464 aa6.66□□□□□ -1.34
SWM2YNR004W EMW1P42842 904 aaKnown RBP6.65□□□□□ -1.34
SWM2YNR004W CCP1P00431 361 aa6.64□□□□□ -1.35
SWM2YNR004W LYS5P50113 272 aa6.64□□□□□ -1.35
SWM2YNR004W YJU3P28321 313 aa6.63□□□□□ -1.35
SWM2YNR004W JJJ3P47138 172 aa6.62□□□□□ -1.35
SWM2YNR004W ATF2P53296 535 aa6.62□□□□□ -1.35
SWM2YNR004W MKS1P34072 584 aa6.61□□□□□ -1.35
SWM2YNR004W MDJ1P35191 511 aa6.61□□□□□ -1.35
SWM2YNR004W NSG2P53898 299 aa6.6□□□□□ -1.35
SWM2YNR004W DFG5Q05031 458 aa6.59□□□□□ -1.35
SWM2YNR004W RSC30P38781 883 aa6.56□□□□□ -1.36
SWM2YNR004W BDS1Q08347 646 aa6.56□□□□□ -1.36
SWM2YNR004W PKH3Q03306 898 aaPredicted RBP6.55□□□□□ -1.36
SWM2YNR004W CDC19P00549 500 aaKnown RBP6.54□□□□□ -1.36
SWM2YNR004W ARG8P18544 423 aa6.54□□□□□ -1.36
SWM2YNR004W FIG4P42837 879 aa6.54□□□□□ -1.36
SWM2YNR004W NAM8Q00539 523 aaKnown RBP6.54□□□□□ -1.36
SWM2YNR004W THI72Q08579 599 aa6.53□□□□□ -1.36
SWM2YNR004W NRD1P53617 575 aaKnown RBP RIP-Chip data6.52□□□□□ -1.37not detected
SWM2YNR004W AI1P03875 834 aa6.51□□□□□ -1.37
SWM2YNR004W FBP26P32604 452 aa6.51□□□□□ -1.37
SWM2YNR004W GLC3P32775 704 aa6.49□□□□□ -1.37
SWM2YNR004W CUZ1P53899 274 aa6.49□□□□□ -1.37
SWM2YNR004W TEC1P18412 486 aa6.48□□□□□ -1.37
SWM2YNR004W DMA1P38823 416 aa6.48□□□□□ -1.37
SWM2YNR004W VTC4P47075 721 aa6.48□□□□□ -1.37
SWM2YNR004W KTR1P27810 393 aaKnown RBP6.47□□□□□ -1.37
SWM2YNR004W CEM1P39525 442 aa6.47□□□□□ -1.37
SWM2YNR004W CCT8P47079 568 aaKnown RBP6.47□□□□□ -1.37
SWM2YNR004W STE6P12866 1290 aa6.46□□□□□ -1.38
SWM2YNR004W YFL066CP43538 392 aa6.46□□□□□ -1.38
SWM2YNR004W YNR021WP53723 404 aaKnown RBP6.46□□□□□ -1.38
SWM2YNR004W YPR053CQ6Q5F3 151 aa6.45□□□□□ -1.38
SWM2YNR004W SBP1P10080 294 aaKnown RBP6.41□□□□□ -1.38
SWM2YNR004W DAL1P32375 460 aa6.41□□□□□ -1.38
SWM2YNR004W DLD3P39976 496 aaKnown RBP6.41□□□□□ -1.38
SWM2YNR004W YPR084WQ06821 456 aa6.41□□□□□ -1.38
SWM2YNR004W CSN12P47130 423 aa6.4□□□□□ -1.38
SWM2YNR004W ADE12P80210 433 aaKnown RBP6.4□□□□□ -1.38
SWM2YNR004W ISU1Q03020 165 aa6.4□□□□□ -1.38
SWM2YNR004W RAD59Q12223 238 aa6.4□□□□□ -1.38
SWM2YNR004W RPP2BP02400 110 aaKnown RBP6.39□□□□□ -1.39
SWM2YNR004W ATG20Q07528 640 aa6.39□□□□□ -1.39
SWM2YNR004W YMR265CQ03508 461 aaKnown RBP6.38□□□□□ -1.39
SWM2YNR004W GUT2P32191 649 aa6.37□□□□□ -1.39
SWM2YNR004W UBP15P50101 1230 aa6.37□□□□□ -1.39
SWM2YNR004W DIT1P21623 536 aa6.36□□□□□ -1.39
SWM2YNR004W SBE2P42223 864 aaKnown RBP6.36□□□□□ -1.39
SWM2YNR004W TDA6Q06466 467 aa6.36□□□□□ -1.39
SWM2YNR004W SYT1Q06836 1226 aa6.36□□□□□ -1.39
SWM2YNR004W AIM7Q12156 149 aa6.35□□□□□ -1.39
SWM2YNR004W KRE33P53914 1056 aaKnown RBP6.34□□□□□ -1.39
SWM2YNR004W YMR187CQ03236 431 aa6.34□□□□□ -1.39
SWM2YNR004W SKN7P38889 622 aa6.33□□□□□ -1.4
SWM2YNR004W YDR461C-AQ2V2P7 80 aa6.32□□□□□ -1.4
SWM2YNR004W YNR014WP53719 212 aa6.31□□□□□ -1.4
SWM2YNR004W MAK16P10962 306 aaPredicted RBP6.3□□□□□ -1.4
SWM2YNR004W MSN5P52918 1224 aa6.3□□□□□ -1.4
SWM2YNR004W STE20Q03497 939 aaKnown RBP6.3□□□□□ -1.4
SWM2YNR004W AHP1P38013 176 aaKnown RBP6.29□□□□□ -1.4
SWM2YNR004W SLA1P32790 1244 aa6.28□□□□□ -1.4
SWM2YNR004W FRA1Q07825 749 aa6.28□□□□□ -1.4
SWM2YNR004W SSN3P39073 555 aa6.27□□□□□ -1.41
SWM2YNR004W WTM2Q12206 467 aa6.27□□□□□ -1.41
SWM2YNR004W TY1A-DR3Q12441 440 aa6.27□□□□□ -1.41
SWM2YNR004W NAF1P53919 492 aaKnown RBP6.26□□□□□ -1.41
SWM2YNR004W DAT1P13483 248 aaKnown RBP6.24□□□□□ -1.41
SWM2YNR004W MCX1P38323 520 aaPredicted RBP6.24□□□□□ -1.41
SWM2YNR004W SSA2P10592 639 aaKnown RBP6.23□□□□□ -1.41
SWM2YNR004W UTR2P32623 467 aa6.23□□□□□ -1.41
SWM2YNR004W ISR1Q06098 443 aaKnown RBP6.23□□□□□ -1.41
SWM2YNR004W BOI2P39969 1040 aa6.22□□□□□ -1.41
SWM2YNR004W GPM1P00950 247 aaKnown RBP6.21□□□□□ -1.42
SWM2YNR004W FPS1P23900 669 aa6.21□□□□□ -1.42
SWM2YNR004W SPT2P06843 333 aaPredicted RBP6.2□□□□□ -1.42
SWM2YNR004W YCK2P23292 546 aaKnown RBP6.2□□□□□ -1.42
SWM2YNR004W TBS1P38114 1094 aa6.2□□□□□ -1.42
SWM2YNR004W UTP7P40055 554 aaKnown RBP6.2□□□□□ -1.42
SWM2YNR004W ALA1P40825 983 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms