RNA–Protein interactions for RNA: YNL278W

CAF120, Transcript of Part of the CCR4-NOT transcriptional regulatory complex, yeastyeast

Gene CAF120, Length 3,183 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAF120YNL278W KRE5P22023 1365 aa3.6□□□□□ -1.83
CAF120YNL278W PRS1P32895 427 aaKnown RBP3.6□□□□□ -1.83
CAF120YNL278W SNU71P53207 620 aaKnown RBP3.59□□□□□ -1.83
CAF120YNL278W TOP1P04786 769 aa3.59□□□□□ -1.84
CAF120YNL278W IPL1P38991 367 aa3.59□□□□□ -1.84
CAF120YNL278W NCS6P53088 359 aa3.59□□□□□ -1.84
CAF120YNL278W PIB1Q06651 286 aa3.58□□□□□ -1.84
CAF120YNL278W CAB3P36076 571 aa3.57□□□□□ -1.84
CAF120YNL278W YJR008WP47085 338 aa3.57□□□□□ -1.84
CAF120YNL278W RAD9P14737 1309 aa3.57□□□□□ -1.84
CAF120YNL278W BUD21Q08492 214 aaPredicted RBP3.57□□□□□ -1.84
CAF120YNL278W HOP09932 586 aa3.57□□□□□ -1.84
CAF120YNL278W CTF4Q01454 927 aa3.57□□□□□ -1.84
CAF120YNL278W ENT1Q12518 454 aa3.56□□□□□ -1.84
CAF120YNL278W MNN4P36044 1178 aa3.56□□□□□ -1.84
CAF120YNL278W ALD4P46367 519 aaKnown RBP3.56□□□□□ -1.84
CAF120YNL278W FPK1P53739 893 aa3.56□□□□□ -1.84
CAF120YNL278W MAM3Q12296 706 aa3.56□□□□□ -1.84
CAF120YNL278W DCD1P06773 312 aa3.55□□□□□ -1.84
CAF120YNL278W CST9Q06032 482 aa3.55□□□□□ -1.84
CAF120YNL278W ARP8Q12386 881 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
CAF120YNL278W BDF1P35817 686 aa3.55□□□□□ -1.84
CAF120YNL278W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.55□□□□□ -1.84not detected
CAF120YNL278W CUP1-1P0CX80 61 aa3.54□□□□□ -1.84
CAF120YNL278W CUP1-2P0CX81 61 aa3.54□□□□□ -1.84
CAF120YNL278W PAF1P38351 445 aa3.54□□□□□ -1.84
CAF120YNL278W LAM6Q08001 693 aa3.53□□□□□ -1.84
CAF120YNL278W CDC45Q08032 650 aa3.53□□□□□ -1.84
CAF120YNL278W BUD27P43573 796 aaKnown RBP RIP-Chip data3.53□□□□□ -1.84not detected
CAF120YNL278W MRX12P47084 519 aa3.53□□□□□ -1.84
CAF120YNL278W YPR148CQ06523 435 aa3.53□□□□□ -1.84
CAF120YNL278W FLO1P32768 1537 aa3.53□□□□□ -1.84
CAF120YNL278W NSR1P27476 414 aaKnown RBP RIP-Chip data3.53□□□□□ -1.85not detected
CAF120YNL278W TIF6Q12522 245 aaKnown RBP3.53□□□□□ -1.85
CAF120YNL278W GRX4P32642 244 aa3.52□□□□□ -1.85
CAF120YNL278W GLC3P32775 704 aa3.52□□□□□ -1.85
CAF120YNL278W FKS1P38631 1876 aaKnown RBP3.52□□□□□ -1.85
CAF120YNL278W WHI3P34761 661 aaKnown RBP3.51□□□□□ -1.85
CAF120YNL278W CLA4P48562 842 aa3.51□□□□□ -1.85
CAF120YNL278W CTT1P06115 562 aa3.51□□□□□ -1.85
CAF120YNL278W MDG1P53885 366 aa3.51□□□□□ -1.85
CAF120YNL278W SWE1P32944 819 aa3.51□□□□□ -1.85
CAF120YNL278W PAM1P37304 830 aaKnown RBP3.51□□□□□ -1.85
CAF120YNL278W SLX8P40072 274 aa3.51□□□□□ -1.85
CAF120YNL278W SIS1P25294 352 aaKnown RBP3.5□□□□□ -1.85
CAF120YNL278W NPR2P39923 615 aa3.5□□□□□ -1.85
CAF120YNL278W CDC27P38042 758 aa3.5□□□□□ -1.85
CAF120YNL278W VPS27P40343 622 aaKnown RBP3.5□□□□□ -1.85
CAF120YNL278W LSP1Q12230 341 aaKnown RBP3.5□□□□□ -1.85
CAF120YNL278W TFC8Q12308 588 aa3.5□□□□□ -1.85
CAF120YNL278W DSF2P38213 736 aa3.49□□□□□ -1.85
CAF120YNL278W GUA1P38625 525 aaKnown RBP3.49□□□□□ -1.85
CAF120YNL278W MGA2P40578 1113 aa3.49□□□□□ -1.85
CAF120YNL278W NOP7P53261 605 aaKnown RBP3.49□□□□□ -1.85
CAF120YNL278W ALD3P54114 506 aa3.49□□□□□ -1.85
CAF120YNL278W SSK22P25390 1331 aaPredicted RBP3.49□□□□□ -1.85
CAF120YNL278W BRL1P38770 471 aa3.49□□□□□ -1.85
CAF120YNL278W RSM7P47150 247 aa3.49□□□□□ -1.85
CAF120YNL278W SUB2Q07478 446 aaKnown RBP3.49□□□□□ -1.85
CAF120YNL278W MAP2P38174 421 aaKnown RBP3.49□□□□□ -1.85
CAF120YNL278W SCY1P53009 804 aa3.49□□□□□ -1.85
CAF120YNL278W NUP145P49687 1317 aa3.49□□□□□ -1.85
CAF120YNL278W KIN1P13185 1064 aa3.48□□□□□ -1.85
CAF120YNL278W SPB4P25808 606 aaPredicted RBP3.48□□□□□ -1.85
CAF120YNL278W NPL4P33755 580 aa3.48□□□□□ -1.85
CAF120YNL278W CWC22P53333 577 aaKnown RBP3.48□□□□□ -1.85
CAF120YNL278W RAM2P29703 316 aa3.48□□□□□ -1.85
CAF120YNL278W PDR18P53756 1333 aa3.47□□□□□ -1.85
CAF120YNL278W MTR4P47047 1073 aaKnown RBP3.47□□□□□ -1.85
CAF120YNL278W SAC3P46674 1301 aa3.47□□□□□ -1.85
CAF120YNL278W HYR1P40581 163 aaKnown RBP3.47□□□□□ -1.85
CAF120YNL278W NOP2P40991 618 aaKnown RBP3.47□□□□□ -1.85
CAF120YNL278W FAR11P53917 953 aa3.47□□□□□ -1.85
CAF120YNL278W MYO1P08964 1928 aa3.46□□□□□ -1.86
CAF120YNL278W YMR084WA2P2R3 262 aa3.46□□□□□ -1.86
CAF120YNL278W TIF4632P39936 914 aaKnown RBP3.46□□□□□ -1.86
CAF120YNL278W ECM16Q04217 1267 aaKnown RBP3.46□□□□□ -1.86
CAF120YNL278W HEF3P53978 1044 aaKnown RBP3.46□□□□□ -1.86
CAF120YNL278W SPC42P36094 363 aa3.45□□□□□ -1.86
CAF120YNL278W SET1P38827 1080 aaKnown RBP3.45□□□□□ -1.86
CAF120YNL278W PSD2P53037 1138 aaKnown RBP3.45□□□□□ -1.86
CAF120YNL278W SEN54Q02825 467 aaPredicted RBP3.45□□□□□ -1.86
CAF120YNL278W TPO2P53283 614 aa3.45□□□□□ -1.86
CAF120YNL278W CPS1P27614 576 aa3.45□□□□□ -1.86
CAF120YNL278W GEF1P37020 779 aa3.45□□□□□ -1.86
CAF120YNL278W PIL1P53252 339 aaKnown RBP3.45□□□□□ -1.86
CAF120YNL278W NUP42P49686 430 aaKnown RBP3.44□□□□□ -1.86
CAF120YNL278W GIN4Q12263 1142 aa3.44□□□□□ -1.86
CAF120YNL278W OCA5P38738 679 aa3.44□□□□□ -1.86
CAF120YNL278W MAM1P40065 302 aa3.44□□□□□ -1.86
CAF120YNL278W SAP155P43612 1002 aa3.44□□□□□ -1.86
CAF120YNL278W JSN1P47135 1091 aaKnown RBP RIP-Chip data3.44□□□□□ -1.86not detected
CAF120YNL278W CDC16P09798 840 aa3.43□□□□□ -1.86
CAF120YNL278W SLX5P32828 619 aaKnown RBP3.43□□□□□ -1.86
CAF120YNL278W YLR278CQ05854 1341 aa3.43□□□□□ -1.86
CAF120YNL278W AI2P03876 854 aa3.43□□□□□ -1.86
CAF120YNL278W GCD7P32502 381 aaPredicted RBP3.43□□□□□ -1.86
CAF120YNL278W ERT1P38140 529 aa3.43□□□□□ -1.86
CAF120YNL278W UBP9P39967 754 aa3.43□□□□□ -1.86
CAF120YNL278W NUG1P40010 520 aaKnown RBP3.43□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 60.1 ms