RNA–Protein interactions for RNA: YMR224C

MRE11, Transcript of Nuclease subunit of the MRX complex with Rad50p and Xrs2p, yeastyeast

Gene MRE11, Length 2,079 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MRE11YMR224C TOP1P04786 769 aa7.05□□□□□ -1.28
MRE11YMR224C SRS2P12954 1174 aa7.05□□□□□ -1.28
MRE11YMR224C ACF4P47129 309 aa7.05□□□□□ -1.28
MRE11YMR224C DPL1Q05567 589 aa7.05□□□□□ -1.28
MRE11YMR224C ERF2Q06551 359 aa7.05□□□□□ -1.28
MRE11YMR224C FRT1Q99332 602 aa7.05□□□□□ -1.28
MRE11YMR224C FUR4P05316 633 aaKnown RBP7.05□□□□□ -1.28
MRE11YMR224C MET4P32389 672 aa7.04□□□□□ -1.28
MRE11YMR224C UTP13Q05946 817 aaKnown RBP7.04□□□□□ -1.28
MRE11YMR224C QDR1P40475 563 aa7.04□□□□□ -1.28
MRE11YMR224C STE20Q03497 939 aaKnown RBP7.04□□□□□ -1.28
MRE11YMR224C PUN1Q06991 263 aa7.04□□□□□ -1.28
MRE11YMR224C YOL098CQ12496 1037 aa7.04□□□□□ -1.28
MRE11YMR224C MET1P36150 593 aa7.03□□□□□ -1.28
MRE11YMR224C GLO3P38682 493 aaKnown RBP7.03□□□□□ -1.28
MRE11YMR224C APL6P46682 809 aa7.03□□□□□ -1.28
MRE11YMR224C YDL206WQ12424 762 aa7.03□□□□□ -1.28
MRE11YMR224C TEC1P18412 486 aa7.02□□□□□ -1.29
MRE11YMR224C GUT2P32191 649 aa7.02□□□□□ -1.29
MRE11YMR224C GAS4Q08271 471 aa7.02□□□□□ -1.29
MRE11YMR224C YPR084WQ06821 456 aa7.02□□□□□ -1.29
MRE11YMR224C TSC13Q99190 310 aa7.02□□□□□ -1.29
MRE11YMR224C NUD1P32336 851 aa7.01□□□□□ -1.29
MRE11YMR224C SOH1P38633 127 aa7.01□□□□□ -1.29
MRE11YMR224C FIG4P42837 879 aa7.01□□□□□ -1.29
MRE11YMR224C RNH70P53331 553 aa7.01□□□□□ -1.29
MRE11YMR224C MPC54Q08550 464 aa7.01□□□□□ -1.29
MRE11YMR224C ISU2Q12056 156 aa7.01□□□□□ -1.29
MRE11YMR224C MNL2Q12205 849 aa7□□□□□ -1.29
MRE11YMR224C RPA14P50106 137 aa6.99□□□□□ -1.29
MRE11YMR224C VAN1P23642 535 aa6.98□□□□□ -1.29
MRE11YMR224C MID1P41821 548 aa6.98□□□□□ -1.29
MRE11YMR224C JIP4Q03361 876 aa6.98□□□□□ -1.29
MRE11YMR224C FYV10P40492 516 aa6.97□□□□□ -1.29
MRE11YMR224C TUB4P53378 473 aa6.97□□□□□ -1.29
MRE11YMR224C AGE1Q04412 482 aa6.97□□□□□ -1.29
MRE11YMR224C PDI1P17967 522 aaKnown RBP6.97□□□□□ -1.29
MRE11YMR224C EAP1P36041 632 aaKnown RBP6.97□□□□□ -1.29
MRE11YMR224C VAC8P39968 578 aa6.97□□□□□ -1.29
MRE11YMR224C YPR097WQ06839 1073 aa6.97□□□□□ -1.29
MRE11YMR224C LSO1Q3E827 93 aa6.97□□□□□ -1.29
MRE11YMR224C ALD3P54114 506 aa6.96□□□□□ -1.29
MRE11YMR224C TRS33Q99394 268 aa6.96□□□□□ -1.29
MRE11YMR224C TRP5P00931 707 aaKnown RBP6.96□□□□□ -1.3
MRE11YMR224C NPL4P33755 580 aa6.94□□□□□ -1.3
MRE11YMR224C ATG36P46983 293 aa6.94□□□□□ -1.3
MRE11YMR224C ALD6P54115 500 aaKnown RBP6.94□□□□□ -1.3
MRE11YMR224C SRP40P32583 406 aaPredicted RBP6.94□□□□□ -1.3
MRE11YMR224C ALR1Q08269 859 aa6.94□□□□□ -1.3
MRE11YMR224C MIP1P15801 1254 aa6.93□□□□□ -1.3
MRE11YMR224C SUV3P32580 737 aa6.93□□□□□ -1.3
MRE11YMR224C IOC3P43596 787 aa6.93□□□□□ -1.3
MRE11YMR224C NMA111P53920 997 aa6.93□□□□□ -1.3
MRE11YMR224C TRS120Q04183 1289 aa6.93□□□□□ -1.3
MRE11YMR224C PIN2Q12057 282 aa6.93□□□□□ -1.3
MRE11YMR224C PPG1P32838 368 aa6.92□□□□□ -1.3
MRE11YMR224C VPS16Q03308 798 aa6.92□□□□□ -1.3
MRE11YMR224C PML39Q03760 334 aa6.92□□□□□ -1.3
MRE11YMR224C GPI13Q07830 1017 aa6.92□□□□□ -1.3
MRE11YMR224C SPR3P41901 512 aa6.92□□□□□ -1.3
MRE11YMR224C ISM1P48526 1002 aa6.92□□□□□ -1.3
MRE11YMR224C CBC2Q08920 208 aaKnown RBP RIP-Chip data6.92□□□□□ -1.3not detected
MRE11YMR224C PHO4P07270 312 aaKnown RBP6.91□□□□□ -1.3
MRE11YMR224C RAM1P22007 431 aa6.91□□□□□ -1.3
MRE11YMR224C BOI1P38041 980 aaKnown RBP6.91□□□□□ -1.3
MRE11YMR224C MAD1P40957 749 aa6.91□□□□□ -1.3
MRE11YMR224C YFL034WP43564 1073 aa6.91□□□□□ -1.3
MRE11YMR224C STR2P47164 639 aa6.91□□□□□ -1.3
MRE11YMR224C SPR28Q04921 423 aa6.91□□□□□ -1.3
MRE11YMR224C CIT2P08679 460 aa6.91□□□□□ -1.3
MRE11YMR224C MCM2P29469 868 aa6.91□□□□□ -1.3
MRE11YMR224C PEX29Q03370 554 aa6.91□□□□□ -1.3
MRE11YMR224C SPT2P06843 333 aaPredicted RBP6.9□□□□□ -1.3
MRE11YMR224C RPT1P33299 467 aaKnown RBP6.9□□□□□ -1.3
MRE11YMR224C YKL091CP33324 310 aaKnown RBP6.9□□□□□ -1.3
MRE11YMR224C RRP14P36080 434 aaKnown RBP6.9□□□□□ -1.3
MRE11YMR224C FPR3P38911 411 aaKnown RBP6.9□□□□□ -1.3
MRE11YMR224C HAL5P38970 855 aaKnown RBP6.9□□□□□ -1.3
MRE11YMR224C OSW7P43611 510 aa6.9□□□□□ -1.3
MRE11YMR224C RMD1Q03441 430 aa6.9□□□□□ -1.3
MRE11YMR224C UBP1P25037 809 aa6.89□□□□□ -1.31
MRE11YMR224C AIM9P40053 627 aaKnown RBP6.89□□□□□ -1.31
MRE11YMR224C WSC3Q12215 556 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-DR4O74302 440 aa6.89□□□□□ -1.31
MRE11YMR224C PDC1P06169 563 aaKnown RBP6.89□□□□□ -1.31
MRE11YMR224C TY1A-HP0C2I4 478 aaKnown RBP6.89□□□□□ -1.31
MRE11YMR224C TY1A-AP0CX57 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-PR1P0CX58 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-ORP0CX59 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-PR2P0CX60 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-DR5P0CX65 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-ER2P0CX66 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-GR3P0CX67 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-LR1P0CX68 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-MR2P0CX69 440 aa6.89□□□□□ -1.31
MRE11YMR224C PDR1P12383 1068 aa6.89□□□□□ -1.31
MRE11YMR224C SEC2P17065 759 aa6.89□□□□□ -1.31
MRE11YMR224C YJL049WP47048 450 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-JR2P47099 440 aa6.89□□□□□ -1.31
MRE11YMR224C TY1A-DR1Q03856 440 aa6.89□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms