RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C SLY41P22215 453 aa7□□□□□ -1.29
SSO2YMR183C KIP2P28743 706 aa7□□□□□ -1.29
SSO2YMR183C KIN1P13185 1064 aa6.99□□□□□ -1.29
SSO2YMR183C GLN1P32288 370 aaKnown RBP6.99□□□□□ -1.29
SSO2YMR183C MDJ1P35191 511 aa6.99□□□□□ -1.29
SSO2YMR183C MMP1Q12372 583 aa6.99□□□□□ -1.29
SSO2YMR183C DPH6Q12429 685 aa6.99□□□□□ -1.29
SSO2YMR183C SCJ1P25303 377 aa6.98□□□□□ -1.29
SSO2YMR183C UBP2Q01476 1272 aa6.97□□□□□ -1.29
SSO2YMR183C IXR1P33417 597 aa6.96□□□□□ -1.3
SSO2YMR183C LSC2P53312 427 aa6.96□□□□□ -1.3
SSO2YMR183C RTT106P40161 455 aa6.95□□□□□ -1.3
SSO2YMR183C CSN12P47130 423 aa6.95□□□□□ -1.3
SSO2YMR183C PUS6P53294 404 aa6.95□□□□□ -1.3
SSO2YMR183C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.94□□□□□ -1.3not detected
SSO2YMR183C ROG3P43602 733 aa6.94□□□□□ -1.3
SSO2YMR183C ESS1P22696 170 aa6.93□□□□□ -1.3
SSO2YMR183C KTR1P27810 393 aaKnown RBP6.93□□□□□ -1.3
SSO2YMR183C CCP1P00431 361 aa6.92□□□□□ -1.3
SSO2YMR183C AAD14P42884 376 aa6.92□□□□□ -1.3
SSO2YMR183C TY1A-MR1Q04215 440 aa6.92□□□□□ -1.3
SSO2YMR183C ARG82P07250 355 aa6.91□□□□□ -1.3
SSO2YMR183C TRM1P15565 570 aaKnown RBP6.91□□□□□ -1.3
SSO2YMR183C TBF1Q02457 562 aa6.91□□□□□ -1.3
SSO2YMR183C YJU3P28321 313 aa6.9□□□□□ -1.3
SSO2YMR183C YJR098CP47139 656 aa6.9□□□□□ -1.3
SSO2YMR183C RPA14P50106 137 aa6.89□□□□□ -1.31
SSO2YMR183C ALR1Q08269 859 aa6.89□□□□□ -1.31
SSO2YMR183C TCB1Q12466 1186 aa6.89□□□□□ -1.31
SSO2YMR183C SSA2P10592 639 aaKnown RBP6.88□□□□□ -1.31
SSO2YMR183C DLD1P32891 587 aa6.88□□□□□ -1.31
SSO2YMR183C NSG2P53898 299 aa6.88□□□□□ -1.31
SSO2YMR183C PKH3Q03306 898 aaPredicted RBP6.88□□□□□ -1.31
SSO2YMR183C YDL206WQ12424 762 aa6.88□□□□□ -1.31
SSO2YMR183C OSH7P38755 437 aa6.87□□□□□ -1.31
SSO2YMR183C RSC30P38781 883 aa6.87□□□□□ -1.31
SSO2YMR183C LYS5P50113 272 aa6.87□□□□□ -1.31
SSO2YMR183C YPR097WQ06839 1073 aa6.87□□□□□ -1.31
SSO2YMR183C CCT8P47079 568 aaKnown RBP6.86□□□□□ -1.31
SSO2YMR183C JJJ3P47138 172 aa6.86□□□□□ -1.31
SSO2YMR183C ARG8P18544 423 aa6.85□□□□□ -1.31
SSO2YMR183C GUA1P38625 525 aaKnown RBP6.85□□□□□ -1.31
SSO2YMR183C LEO1P38439 464 aa6.84□□□□□ -1.31
SSO2YMR183C RAD59Q12223 238 aa6.83□□□□□ -1.32
SSO2YMR183C YBL086CP38177 466 aa6.82□□□□□ -1.32
SSO2YMR183C HPC2Q01448 625 aa6.82□□□□□ -1.32
SSO2YMR183C THI72Q08579 599 aa6.81□□□□□ -1.32
SSO2YMR183C YFL066CP43538 392 aa6.8□□□□□ -1.32
SSO2YMR183C AI1P03875 834 aa6.74□□□□□ -1.33
SSO2YMR183C VAC17P25591 423 aa6.74□□□□□ -1.33
SSO2YMR183C BRL1P38770 471 aa6.74□□□□□ -1.33
SSO2YMR183C SBP1P10080 294 aaKnown RBP6.73□□□□□ -1.33
SSO2YMR183C NAM8Q00539 523 aaKnown RBP6.73□□□□□ -1.33
SSO2YMR183C TFB3Q03290 321 aa6.73□□□□□ -1.33
SSO2YMR183C MAK16P10962 306 aaPredicted RBP6.72□□□□□ -1.33
SSO2YMR183C CSE4P36012 229 aa6.72□□□□□ -1.33
SSO2YMR183C FIG4P42837 879 aa6.7□□□□□ -1.34
SSO2YMR183C APP1P53933 587 aa6.7□□□□□ -1.34
SSO2YMR183C YPR053CQ6Q5F3 151 aa6.7□□□□□ -1.34
SSO2YMR183C ITT1Q04638 464 aa6.69□□□□□ -1.34
SSO2YMR183C YBL036CP38197 257 aa6.68□□□□□ -1.34
SSO2YMR183C NAF1P53919 492 aaKnown RBP6.68□□□□□ -1.34
SSO2YMR183C CDC19P00549 500 aaKnown RBP6.67□□□□□ -1.34
SSO2YMR183C TEC1P18412 486 aa6.67□□□□□ -1.34
SSO2YMR183C PKC1P24583 1151 aa6.67□□□□□ -1.34
SSO2YMR183C SPT5P27692 1063 aaKnown RBP6.66□□□□□ -1.34
SSO2YMR183C HGH1P48362 394 aaKnown RBP6.66□□□□□ -1.34
SSO2YMR183C EMW1P42842 904 aaKnown RBP6.65□□□□□ -1.34
SSO2YMR183C SKN7P38889 622 aa6.64□□□□□ -1.35
SSO2YMR183C YPR084WQ06821 456 aa6.64□□□□□ -1.35
SSO2YMR183C CUZ1P53899 274 aa6.63□□□□□ -1.35
SSO2YMR183C GUT2P32191 649 aa6.62□□□□□ -1.35
SSO2YMR183C DFG5Q05031 458 aa6.6□□□□□ -1.35
SSO2YMR183C FRA1Q07825 749 aa6.6□□□□□ -1.35
SSO2YMR183C BIO2P32451 375 aa6.59□□□□□ -1.35
SSO2YMR183C CEM1P39525 442 aa6.59□□□□□ -1.35
SSO2YMR183C SBE2P42223 864 aaKnown RBP6.59□□□□□ -1.35
SSO2YMR183C STE20Q03497 939 aaKnown RBP6.59□□□□□ -1.35
SSO2YMR183C YDJ1P25491 409 aaKnown RBP6.58□□□□□ -1.36
SSO2YMR183C TDA6Q06466 467 aa6.58□□□□□ -1.36
SSO2YMR183C MCM16Q12262 181 aa6.58□□□□□ -1.36
SSO2YMR183C SUP45P12385 437 aaKnown RBP6.57□□□□□ -1.36
SSO2YMR183C MKS1P34072 584 aa6.57□□□□□ -1.36
SSO2YMR183C MRX12P47084 519 aa6.57□□□□□ -1.36
SSO2YMR183C YJL007CP47080 104 aa6.56□□□□□ -1.36
SSO2YMR183C YMR187CQ03236 431 aa6.56□□□□□ -1.36
SSO2YMR183C EMP47P43555 445 aa6.55□□□□□ -1.36
SSO2YMR183C YNL108CP53929 270 aa6.55□□□□□ -1.36
SSO2YMR183C YPP1P46951 817 aa6.54□□□□□ -1.36
SSO2YMR183C ADE12P80210 433 aaKnown RBP6.54□□□□□ -1.36
SSO2YMR183C VTC4P47075 721 aa6.53□□□□□ -1.36
SSO2YMR183C DMA2P53924 522 aa6.53□□□□□ -1.36
SSO2YMR183C ISF1P32488 338 aa6.52□□□□□ -1.37
SSO2YMR183C FBP26P32604 452 aa6.52□□□□□ -1.37
SSO2YMR183C BIM1P40013 344 aa6.52□□□□□ -1.37
SSO2YMR183C ATG20Q07528 640 aa6.52□□□□□ -1.37
SSO2YMR183C BDS1Q08347 646 aa6.52□□□□□ -1.37
SSO2YMR183C ENO2P00925 437 aaKnown RBP6.51□□□□□ -1.37
SSO2YMR183C APL6P46682 809 aa6.51□□□□□ -1.37
SSO2YMR183C STE6P12866 1290 aa6.5□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 52.2 ms