RNA–Protein interactions for RNA: YMR128W

ECM16, Transcript of Essential DEAH-box ATP-dependent RNA helicase specific to U3 snoRNP, yeastyeast

Gene ECM16, Length 3,804 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ECM16YMR128W SIS2P36024 562 aa4.78□□□□□ -1.64
ECM16YMR128W YDL144CQ07589 356 aa4.78□□□□□ -1.64
ECM16YMR128W IML1P47170 1584 aa4.78□□□□□ -1.64
ECM16YMR128W VPS27P40343 622 aaKnown RBP4.78□□□□□ -1.64
ECM16YMR128W YAP3P38749 330 aa4.78□□□□□ -1.64
ECM16YMR128W BIO2P32451 375 aa4.77□□□□□ -1.65
ECM16YMR128W TYW1Q08960 810 aaKnown RBP4.77□□□□□ -1.65
ECM16YMR128W YAP5P40574 245 aa4.77□□□□□ -1.65
ECM16YMR128W CDC45Q08032 650 aa4.77□□□□□ -1.65
ECM16YMR128W SLI15P38283 698 aa4.77□□□□□ -1.65
ECM16YMR128W BIM1P40013 344 aa4.76□□□□□ -1.65
ECM16YMR128W MPP10P47083 593 aaKnown RBP4.76□□□□□ -1.65
ECM16YMR128W SIT4P20604 311 aa4.76□□□□□ -1.65
ECM16YMR128W SPE2P21182 396 aa4.76□□□□□ -1.65
ECM16YMR128W DAN4P47179 1161 aa4.76□□□□□ -1.65
ECM16YMR128W NUP188P52593 1655 aaKnown RBP4.76□□□□□ -1.65
ECM16YMR128W RRP46P53256 223 aaPredicted RBP4.76□□□□□ -1.65
ECM16YMR128W MPH3P0CE00 602 aa4.75□□□□□ -1.65
ECM16YMR128W ESL2P36168 1195 aa4.75□□□□□ -1.65
ECM16YMR128W SNF2P22082 1703 aa4.75□□□□□ -1.65
ECM16YMR128W DJP1P40564 432 aa4.75□□□□□ -1.65
ECM16YMR128W YDR344CQ05510 147 aa4.75□□□□□ -1.65
ECM16YMR128W RDS2P19541 446 aaKnown RBP4.75□□□□□ -1.65
ECM16YMR128W AI4P03878 556 aa4.74□□□□□ -1.65
ECM16YMR128W SUP45P12385 437 aaKnown RBP4.74□□□□□ -1.65
ECM16YMR128W SCJ1P25303 377 aa4.74□□□□□ -1.65
ECM16YMR128W YML133CQ03099 1374 aa4.74□□□□□ -1.65
ECM16YMR128W YLL067CQ07888 1374 aa4.74□□□□□ -1.65
ECM16YMR128W YLL066CQ99208 1374 aa4.74□□□□□ -1.65
ECM16YMR128W RPP0P05317 312 aaKnown RBP4.73□□□□□ -1.65
ECM16YMR128W RAD9P14737 1309 aa4.73□□□□□ -1.65
ECM16YMR128W TIF1P10081 395 aaKnown RBP4.73□□□□□ -1.65
ECM16YMR128W TYS1P36421 394 aaKnown RBP4.73□□□□□ -1.65
ECM16YMR128W SNF7P39929 240 aaKnown RBP4.73□□□□□ -1.65
ECM16YMR128W CHZ1P40019 153 aaPredicted RBP4.73□□□□□ -1.65
ECM16YMR128W GRE2Q12068 342 aaKnown RBP4.73□□□□□ -1.65
ECM16YMR128W TAF8Q03750 510 aa4.72□□□□□ -1.65
ECM16YMR128W MRX10Q05648 414 aa4.72□□□□□ -1.65
ECM16YMR128W FKH1P40466 484 aa4.72□□□□□ -1.65
ECM16YMR128W YIR014WP40570 242 aa4.72□□□□□ -1.65
ECM16YMR128W YOL036WQ08206 761 aa4.72□□□□□ -1.65
ECM16YMR128W FPR3P38911 411 aaKnown RBP4.71□□□□□ -1.65
ECM16YMR128W PCT1P13259 424 aa4.71□□□□□ -1.66
ECM16YMR128W FPK1P53739 893 aa4.71□□□□□ -1.66
ECM16YMR128W EAF7P53911 425 aaKnown RBP4.71□□□□□ -1.66
ECM16YMR128W DAL5P15365 543 aa4.71□□□□□ -1.66
ECM16YMR128W ROX1P25042 368 aa4.71□□□□□ -1.66
ECM16YMR128W YJU3P28321 313 aa4.71□□□□□ -1.66
ECM16YMR128W SAP155P43612 1002 aa4.71□□□□□ -1.66
ECM16YMR128W CSN12P47130 423 aa4.7□□□□□ -1.66
ECM16YMR128W NAB6Q03735 1134 aaKnown RBP RIP-Chip data4.7□□□□□ -1.66not detected
ECM16YMR128W YRB30P53107 440 aaPredicted RBP4.7□□□□□ -1.66
ECM16YMR128W SEN54Q02825 467 aaPredicted RBP4.7□□□□□ -1.66
ECM16YMR128W HAP1P0CE41 1502 aa4.7□□□□□ -1.66
ECM16YMR128W MET5P47169 1442 aa4.7□□□□□ -1.66
ECM16YMR128W SLN1P39928 1220 aaPredicted RBP4.7□□□□□ -1.66
ECM16YMR128W YJL007CP47080 104 aa4.7□□□□□ -1.66
ECM16YMR128W HST2P53686 357 aa4.69□□□□□ -1.66
ECM16YMR128W YML020WQ03722 664 aa4.69□□□□□ -1.66
ECM16YMR128W CDC73Q06697 393 aa4.69□□□□□ -1.66
ECM16YMR128W YML083CQ04526 418 aa4.69□□□□□ -1.66
ECM16YMR128W YDJ1P25491 409 aaKnown RBP4.69□□□□□ -1.66
ECM16YMR128W YIL092WP40497 633 aa4.69□□□□□ -1.66
ECM16YMR128W THI22Q06490 572 aa4.69□□□□□ -1.66
ECM16YMR128W PUP1P25043 261 aa4.68□□□□□ -1.66
ECM16YMR128W AGE1Q04412 482 aa4.68□□□□□ -1.66
ECM16YMR128W PEP12P32854 288 aa4.68□□□□□ -1.66
ECM16YMR128W MRX12P47084 519 aa4.68□□□□□ -1.66
ECM16YMR128W BCK1Q01389 1478 aa4.68□□□□□ -1.66
ECM16YMR128W TPD3P31383 635 aa4.68□□□□□ -1.66
ECM16YMR128W CSE4P36012 229 aa4.68□□□□□ -1.66
ECM16YMR128W POL32P47110 350 aa4.68□□□□□ -1.66
ECM16YMR128W CAB1Q04430 367 aa4.68□□□□□ -1.66
ECM16YMR128W TTI1P36097 1038 aa4.67□□□□□ -1.66
ECM16YMR128W GYP5Q12344 894 aa4.67□□□□□ -1.66
ECM16YMR128W SEC2P17065 759 aa4.67□□□□□ -1.66
ECM16YMR128W KNS1P32350 737 aaPredicted RBP4.67□□□□□ -1.66
ECM16YMR128W ATH1P48016 1211 aa4.67□□□□□ -1.66
ECM16YMR128W ERF2Q06551 359 aa4.67□□□□□ -1.66
ECM16YMR128W RTR1P40084 226 aaPredicted RBP4.67□□□□□ -1.66
ECM16YMR128W HEF3P53978 1044 aaKnown RBP4.67□□□□□ -1.66
ECM16YMR128W IOC2Q12072 812 aa4.67□□□□□ -1.66
ECM16YMR128W HIM1Q06674 414 aa4.66□□□□□ -1.66
ECM16YMR128W RAD54P32863 898 aa4.66□□□□□ -1.66
ECM16YMR128W TPS3P38426 1054 aaKnown RBP4.66□□□□□ -1.66
ECM16YMR128W RAM1P22007 431 aa4.66□□□□□ -1.66
ECM16YMR128W ALD4P46367 519 aaKnown RBP4.65□□□□□ -1.66
ECM16YMR128W RTT109Q07794 436 aa4.65□□□□□ -1.66
ECM16YMR128W DNF3Q12674 1656 aa4.65□□□□□ -1.66
ECM16YMR128W PRD1P25375 712 aa4.65□□□□□ -1.67
ECM16YMR128W YEL023CP39992 682 aa4.65□□□□□ -1.67
ECM16YMR128W RIM21P48565 533 aa4.65□□□□□ -1.67
ECM16YMR128W ATF2P53296 535 aa4.65□□□□□ -1.67
ECM16YMR128W ESS1P22696 170 aa4.64□□□□□ -1.67
ECM16YMR128W MID1P41821 548 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-DR4O74302 440 aa4.64□□□□□ -1.67
ECM16YMR128W RAD2P07276 1031 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-HP0C2I4 478 aaKnown RBP4.64□□□□□ -1.67
ECM16YMR128W TY1A-AP0CX57 440 aa4.64□□□□□ -1.67
ECM16YMR128W TY1A-PR1P0CX58 440 aa4.64□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 41.5 ms