RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W PDC1P06169 563 aaKnown RBP5.97□□□□□ -1.45
CTK3YML112W TPD3P31383 635 aa5.97□□□□□ -1.45
CTK3YML112W ICP55P40051 511 aa5.97□□□□□ -1.45
CTK3YML112W RPA14P50106 137 aa5.97□□□□□ -1.45
CTK3YML112W YLR346CQ06139 101 aa5.97□□□□□ -1.45
CTK3YML112W YPR097WQ06839 1073 aa5.97□□□□□ -1.45
CTK3YML112W ALR1Q08269 859 aa5.97□□□□□ -1.45
CTK3YML112W SRF1Q12516 437 aa5.97□□□□□ -1.45
CTK3YML112W RSC30P38781 883 aa5.96□□□□□ -1.46
CTK3YML112W SCW11P53189 542 aa5.96□□□□□ -1.46
CTK3YML112W NRD1P53617 575 aaKnown RBP RIP-Chip data5.96□□□□□ -1.46not detected
CTK3YML112W SSA2P10592 639 aaKnown RBP5.95□□□□□ -1.46
CTK3YML112W ARG8P18544 423 aa5.95□□□□□ -1.46
CTK3YML112W GUA1P38625 525 aaKnown RBP5.95□□□□□ -1.46
CTK3YML112W PUS1Q12211 544 aaKnown RBP5.95□□□□□ -1.46
CTK3YML112W SYH1Q02875 849 aaKnown RBP5.94□□□□□ -1.46
CTK3YML112W MDJ1P35191 511 aa5.93□□□□□ -1.46
CTK3YML112W RAD59Q12223 238 aa5.92□□□□□ -1.46
CTK3YML112W MIP1P15801 1254 aa5.91□□□□□ -1.46
CTK3YML112W NUP85P46673 744 aa5.91□□□□□ -1.46
CTK3YML112W YPR204WQ08995 1032 aa5.91□□□□□ -1.46
CTK3YML112W KIP2P28743 706 aa5.88□□□□□ -1.47
CTK3YML112W HPC2Q01448 625 aa5.87□□□□□ -1.47
CTK3YML112W IXR1P33417 597 aa5.86□□□□□ -1.47
CTK3YML112W LEO1P38439 464 aa5.86□□□□□ -1.47
CTK3YML112W VAC17P25591 423 aa5.84□□□□□ -1.47
CTK3YML112W PHM7Q12252 991 aa5.83□□□□□ -1.48
CTK3YML112W CCP1P00431 361 aa5.82□□□□□ -1.48
CTK3YML112W MRT4P33201 236 aaKnown RBP5.82□□□□□ -1.48
CTK3YML112W BRL1P38770 471 aa5.82□□□□□ -1.48
CTK3YML112W ROG3P43602 733 aa5.82□□□□□ -1.48
CTK3YML112W TFB3Q03290 321 aa5.82□□□□□ -1.48
CTK3YML112W MAK16P10962 306 aaPredicted RBP5.81□□□□□ -1.48
CTK3YML112W CSE4P36012 229 aa5.81□□□□□ -1.48
CTK3YML112W FIG4P42837 879 aa5.81□□□□□ -1.48
CTK3YML112W PKC1P24583 1151 aa5.79□□□□□ -1.48
CTK3YML112W YBL036CP38197 257 aa5.79□□□□□ -1.48
CTK3YML112W TY1A-MR1Q04215 440 aa5.79□□□□□ -1.48
CTK3YML112W ITT1Q04638 464 aa5.79□□□□□ -1.48
CTK3YML112W DPH6Q12429 685 aa5.79□□□□□ -1.48
CTK3YML112W DLD1P32891 587 aa5.78□□□□□ -1.48
CTK3YML112W TEC1P18412 486 aa5.77□□□□□ -1.49
CTK3YML112W AAD14P42884 376 aa5.77□□□□□ -1.49
CTK3YML112W LSC2P53312 427 aa5.77□□□□□ -1.49
CTK3YML112W NSG2P53898 299 aa5.77□□□□□ -1.49
CTK3YML112W CCT8P47079 568 aaKnown RBP5.76□□□□□ -1.49
CTK3YML112W YJR098CP47139 656 aa5.76□□□□□ -1.49
CTK3YML112W NAF1P53919 492 aaKnown RBP5.76□□□□□ -1.49
CTK3YML112W APP1P53933 587 aa5.76□□□□□ -1.49
CTK3YML112W TCB1Q12466 1186 aa5.76□□□□□ -1.49
CTK3YML112W UBP2Q01476 1272 aa5.75□□□□□ -1.49
CTK3YML112W GUT2P32191 649 aa5.74□□□□□ -1.49
CTK3YML112W EMW1P42842 904 aaKnown RBP5.74□□□□□ -1.49
CTK3YML112W YPR084WQ06821 456 aa5.74□□□□□ -1.49
CTK3YML112W RTT106P40161 455 aa5.73□□□□□ -1.49
CTK3YML112W YFL066CP43538 392 aa5.73□□□□□ -1.49
CTK3YML112W JJJ3P47138 172 aa5.73□□□□□ -1.49
CTK3YML112W YDJ1P25491 409 aaKnown RBP5.72□□□□□ -1.49
CTK3YML112W SPT5P27692 1063 aaKnown RBP5.72□□□□□ -1.49
CTK3YML112W YBL086CP38177 466 aa5.72□□□□□ -1.49
CTK3YML112W OSH7P38755 437 aa5.72□□□□□ -1.49
CTK3YML112W HGH1P48362 394 aaKnown RBP5.72□□□□□ -1.49
CTK3YML112W STE20Q03497 939 aaKnown RBP5.72□□□□□ -1.49
CTK3YML112W ARG82P07250 355 aa5.71□□□□□ -1.5
CTK3YML112W YJL007CP47080 104 aa5.7□□□□□ -1.5
CTK3YML112W FRA1Q07825 749 aa5.7□□□□□ -1.5
CTK3YML112W THI72Q08579 599 aa5.7□□□□□ -1.5
CTK3YML112W LYS5P50113 272 aa5.69□□□□□ -1.5
CTK3YML112W BIO2P32451 375 aa5.68□□□□□ -1.5
CTK3YML112W ISF1P32488 338 aa5.68□□□□□ -1.5
CTK3YML112W MKS1P34072 584 aa5.68□□□□□ -1.5
CTK3YML112W EMP47P43555 445 aa5.68□□□□□ -1.5
CTK3YML112W YNL108CP53929 270 aa5.68□□□□□ -1.5
CTK3YML112W MCM16Q12262 181 aa5.68□□□□□ -1.5
CTK3YML112W SUP45P12385 437 aaKnown RBP5.67□□□□□ -1.5
CTK3YML112W MRX12P47084 519 aa5.66□□□□□ -1.5
CTK3YML112W DFG5Q05031 458 aa5.66□□□□□ -1.5
CTK3YML112W ATG20Q07528 640 aa5.66□□□□□ -1.5
CTK3YML112W FBP26P32604 452 aa5.65□□□□□ -1.5
CTK3YML112W BIM1P40013 344 aa5.65□□□□□ -1.5
CTK3YML112W DMA2P53924 522 aa5.65□□□□□ -1.5
CTK3YML112W NAM8Q00539 523 aaKnown RBP5.65□□□□□ -1.5
CTK3YML112W BDS1Q08347 646 aa5.65□□□□□ -1.5
CTK3YML112W ENO2P00925 437 aaKnown RBP5.64□□□□□ -1.51
CTK3YML112W YPP1P46951 817 aa5.64□□□□□ -1.51
CTK3YML112W STE6P12866 1290 aa5.63□□□□□ -1.51
CTK3YML112W ATG32P40458 529 aa5.63□□□□□ -1.51
CTK3YML112W ISU1Q03020 165 aa5.63□□□□□ -1.51
CTK3YML112W APL6P46682 809 aa5.62□□□□□ -1.51
CTK3YML112W SBP1P10080 294 aaKnown RBP5.61□□□□□ -1.51
CTK3YML112W ISR1Q06098 443 aaKnown RBP5.61□□□□□ -1.51
CTK3YML112W TIF1P10081 395 aaKnown RBP5.6□□□□□ -1.51
CTK3YML112W YPR053CQ6Q5F3 151 aa5.6□□□□□ -1.51
CTK3YML112W AI1P03875 834 aa5.59□□□□□ -1.51
CTK3YML112W RTG2P32608 588 aaKnown RBP5.59□□□□□ -1.51
CTK3YML112W ATG3P40344 310 aa5.59□□□□□ -1.51
CTK3YML112W RPL34BP40525 121 aaKnown RBP5.59□□□□□ -1.51
CTK3YML112W RIM21P48565 533 aa5.59□□□□□ -1.51
CTK3YML112W RPP2BP02400 110 aaKnown RBP5.58□□□□□ -1.52
CTK3YML112W SOH1P38633 127 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 10.8 ms