RNA–Protein interactions for RNA: YML046W

PRP39, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP39, Length 1,890 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP39YML046W NRD1P53617 575 aaKnown RBP RIP-Chip data4.72□□□□□ -1.65not detected
PRP39YML046W TY1A-MR1Q04215 440 aa4.72□□□□□ -1.65
PRP39YML046W DLD1P32891 587 aa4.71□□□□□ -1.66
PRP39YML046W IES2P40154 320 aa4.71□□□□□ -1.66
PRP39YML046W LYS5P50113 272 aa4.71□□□□□ -1.66
PRP39YML046W FPK1P53739 893 aa4.71□□□□□ -1.66
PRP39YML046W MDJ1P35191 511 aa4.7□□□□□ -1.66
PRP39YML046W OSH7P38755 437 aa4.7□□□□□ -1.66
PRP39YML046W YBL086CP38177 466 aa4.69□□□□□ -1.66
PRP39YML046W TRM1P15565 570 aaKnown RBP4.69□□□□□ -1.66
PRP39YML046W NSG2P53898 299 aa4.69□□□□□ -1.66
PRP39YML046W CCP1P00431 361 aa4.68□□□□□ -1.66
PRP39YML046W JJJ3P47138 172 aa4.68□□□□□ -1.66
PRP39YML046W BUB1P41695 1021 aaKnown RBP RIP-Chip data4.67□□□□□ -1.66not detected
PRP39YML046W VAC17P25591 423 aa4.66□□□□□ -1.66
PRP39YML046W DSF2P38213 736 aa4.64□□□□□ -1.67
PRP39YML046W NUP42P49686 430 aaKnown RBP4.64□□□□□ -1.67
PRP39YML046W APP1P53933 587 aa4.64□□□□□ -1.67
PRP39YML046W SCJ1P25303 377 aa4.62□□□□□ -1.67
PRP39YML046W CCT8P47079 568 aaKnown RBP4.62□□□□□ -1.67
PRP39YML046W HST2P53686 357 aa4.62□□□□□ -1.67
PRP39YML046W THI72Q08579 599 aa4.62□□□□□ -1.67
PRP39YML046W AI1P03875 834 aa4.62□□□□□ -1.67
PRP39YML046W EMW1P42842 904 aaKnown RBP4.61□□□□□ -1.67
PRP39YML046W MMP1Q12372 583 aa4.6□□□□□ -1.67
PRP39YML046W CDC19P00549 500 aaKnown RBP4.58□□□□□ -1.68
PRP39YML046W YFL066CP43538 392 aa4.58□□□□□ -1.68
PRP39YML046W ITT1Q04638 464 aa4.58□□□□□ -1.68
PRP39YML046W SBP1P10080 294 aaKnown RBP4.58□□□□□ -1.68
PRP39YML046W DIT2P21595 489 aa4.58□□□□□ -1.68
PRP39YML046W NAM8Q00539 523 aaKnown RBP4.58□□□□□ -1.68
PRP39YML046W YPR053CQ6Q5F3 151 aa4.58□□□□□ -1.68
PRP39YML046W MKS1P34072 584 aa4.57□□□□□ -1.68
PRP39YML046W DFG5Q05031 458 aa4.57□□□□□ -1.68
PRP39YML046W GLN1P32288 370 aaKnown RBP4.56□□□□□ -1.68
PRP39YML046W ESS1P22696 170 aa4.54□□□□□ -1.68
PRP39YML046W CEM1P39525 442 aa4.54□□□□□ -1.68
PRP39YML046W CUZ1P53899 274 aa4.54□□□□□ -1.68
PRP39YML046W BDS1Q08347 646 aa4.54□□□□□ -1.68
PRP39YML046W VTC4P47075 721 aa4.52□□□□□ -1.69
PRP39YML046W YJU3P28321 313 aa4.51□□□□□ -1.69
PRP39YML046W ADE12P80210 433 aaKnown RBP4.51□□□□□ -1.69
PRP39YML046W FBP26P32604 452 aa4.49□□□□□ -1.69
PRP39YML046W SKN7P38889 622 aa4.49□□□□□ -1.69
PRP39YML046W SPB4P25808 606 aaPredicted RBP4.49□□□□□ -1.69
PRP39YML046W YMR187CQ03236 431 aa4.49□□□□□ -1.69
PRP39YML046W TDA6Q06466 467 aa4.49□□□□□ -1.69
PRP39YML046W RSC30P38781 883 aa4.48□□□□□ -1.69
PRP39YML046W FIG4P42837 879 aa4.48□□□□□ -1.69
PRP39YML046W SBE2P42223 864 aaKnown RBP4.47□□□□□ -1.69
PRP39YML046W STE6P12866 1290 aa4.47□□□□□ -1.69
PRP39YML046W DAL1P32375 460 aa4.46□□□□□ -1.7
PRP39YML046W YMR265CQ03508 461 aaKnown RBP4.46□□□□□ -1.7
PRP39YML046W SYT1Q06836 1226 aa4.46□□□□□ -1.7
PRP39YML046W ATF2P53296 535 aa4.45□□□□□ -1.7
PRP39YML046W DIT1P21623 536 aa4.45□□□□□ -1.7
PRP39YML046W PKH3Q03306 898 aaPredicted RBP4.45□□□□□ -1.7
PRP39YML046W TEC1P18412 486 aa4.43□□□□□ -1.7
PRP39YML046W ARG8P18544 423 aa4.43□□□□□ -1.7
PRP39YML046W UBP15P50101 1230 aa4.43□□□□□ -1.7
PRP39YML046W YNR014WP53719 212 aa4.43□□□□□ -1.7
PRP39YML046W DLD3P39976 496 aaKnown RBP4.43□□□□□ -1.7
PRP39YML046W KRE33P53914 1056 aaKnown RBP4.42□□□□□ -1.7
PRP39YML046W SAS10Q12136 610 aaPredicted RBP4.42□□□□□ -1.7
PRP39YML046W YDR461C-AQ2V2P7 80 aa4.42□□□□□ -1.7
PRP39YML046W RPP2BP02400 110 aaKnown RBP4.41□□□□□ -1.7
PRP39YML046W MCX1P38323 520 aaPredicted RBP4.41□□□□□ -1.7
PRP39YML046W ISU1Q03020 165 aa4.41□□□□□ -1.7
PRP39YML046W YPR084WQ06821 456 aa4.39□□□□□ -1.71
PRP39YML046W ATG20Q07528 640 aa4.38□□□□□ -1.71
PRP39YML046W YCK2P23292 546 aaKnown RBP4.37□□□□□ -1.71
PRP39YML046W KTR1P27810 393 aaKnown RBP4.37□□□□□ -1.71
PRP39YML046W MSN5P52918 1224 aa4.37□□□□□ -1.71
PRP39YML046W YDR215CQ12240 137 aa4.37□□□□□ -1.71
PRP39YML046W AMN1P38285 549 aaPredicted RBP4.36□□□□□ -1.71
PRP39YML046W BOI2P39969 1040 aa4.36□□□□□ -1.71
PRP39YML046W GUT2P32191 649 aa4.35□□□□□ -1.71
PRP39YML046W MAC1P35192 417 aa4.35□□□□□ -1.71
PRP39YML046W GPM1P00950 247 aaKnown RBP4.35□□□□□ -1.71
PRP39YML046W SLA1P32790 1244 aa4.35□□□□□ -1.71
PRP39YML046W AHP1P38013 176 aaKnown RBP4.35□□□□□ -1.71
PRP39YML046W TY1A-DR3Q12441 440 aa4.35□□□□□ -1.71
PRP39YML046W SSN3P39073 555 aa4.34□□□□□ -1.71
PRP39YML046W GLC3P32775 704 aa4.32□□□□□ -1.72
PRP39YML046W MET1P36150 593 aa4.32□□□□□ -1.72
PRP39YML046W SLN1P39928 1220 aaPredicted RBP4.32□□□□□ -1.72
PRP39YML046W LSB6P42951 607 aa4.32□□□□□ -1.72
PRP39YML046W MCA1Q08601 432 aa4.32□□□□□ -1.72
PRP39YML046W WTM2Q12206 467 aa4.32□□□□□ -1.72
PRP39YML046W RAD59Q12223 238 aa4.32□□□□□ -1.72
PRP39YML046W FPS1P23900 669 aa4.32□□□□□ -1.72
PRP39YML046W TAT1P38085 619 aa4.32□□□□□ -1.72
PRP39YML046W YNR021WP53723 404 aaKnown RBP4.31□□□□□ -1.72
PRP39YML046W CSN12P47130 423 aa4.3□□□□□ -1.72
PRP39YML046W GLT1Q12680 2145 aaKnown RBP4.29□□□□□ -1.72
PRP39YML046W STE20Q03497 939 aaKnown RBP4.28□□□□□ -1.72
PRP39YML046W DAT1P13483 248 aaKnown RBP4.28□□□□□ -1.72
PRP39YML046W IRC24P40580 263 aa4.28□□□□□ -1.72
PRP39YML046W NAF1P53919 492 aaKnown RBP4.28□□□□□ -1.72
PRP39YML046W FRA1Q07825 749 aa4.28□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 52.9 ms