RNA–Protein interactions for RNA: YLR417W

VPS36, Transcript of Component of the ESCRT-II complex, yeastyeast

Gene VPS36, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS36YLR417W FKH1P40466 484 aa7.61□□□□□ -1.19
VPS36YLR417W UTP13Q05946 817 aaKnown RBP7.61□□□□□ -1.19
VPS36YLR417W YPR084WQ06821 456 aa7.61□□□□□ -1.19
VPS36YLR417W PDC1P06169 563 aaKnown RBP7.61□□□□□ -1.19
VPS36YLR417W PAT1P25644 796 aaKnown RBP7.61□□□□□ -1.19
VPS36YLR417W UBX7P38349 436 aa7.61□□□□□ -1.19
VPS36YLR417W KXD1P53158 218 aa7.61□□□□□ -1.19
VPS36YLR417W SEN54Q02825 467 aaPredicted RBP7.61□□□□□ -1.19
VPS36YLR417W ELP4Q02884 456 aaKnown RBP7.61□□□□□ -1.19
VPS36YLR417W YDR344CQ05510 147 aa7.61□□□□□ -1.19
VPS36YLR417W HEM3P28789 327 aa7.6□□□□□ -1.19
VPS36YLR417W PAC1P39946 494 aaKnown RBP7.6□□□□□ -1.19
VPS36YLR417W PTC2P39966 464 aaKnown RBP7.59□□□□□ -1.19
VPS36YLR417W PHO87P25360 923 aa7.58□□□□□ -1.2
VPS36YLR417W APL6P46682 809 aa7.58□□□□□ -1.2
VPS36YLR417W RRN7P40992 514 aa7.58□□□□□ -1.2
VPS36YLR417W HAP4P14064 554 aa7.57□□□□□ -1.2
VPS36YLR417W HXT10P43581 546 aa7.57□□□□□ -1.2
VPS36YLR417W PUF6Q04373 656 aaKnown RBP7.57□□□□□ -1.2
VPS36YLR417W YEL077CQ3E7X8 1277 aa7.57□□□□□ -1.2
VPS36YLR417W TPD3P31383 635 aa7.56□□□□□ -1.2
VPS36YLR417W STM1P39015 273 aaKnown RBP7.56□□□□□ -1.2
VPS36YLR417W YML082WQ04533 649 aaKnown RBP7.56□□□□□ -1.2
VPS36YLR417W YPR015CQ12531 247 aa7.56□□□□□ -1.2
VPS36YLR417W SOH1P38633 127 aa7.55□□□□□ -1.2
VPS36YLR417W CWC15Q03772 175 aaKnown RBP7.55□□□□□ -1.2
VPS36YLR417W VAC17P25591 423 aa7.54□□□□□ -1.2
VPS36YLR417W SNU71P53207 620 aaKnown RBP7.54□□□□□ -1.2
VPS36YLR417W SPT16P32558 1035 aaKnown RBP7.53□□□□□ -1.2
VPS36YLR417W ACS2P52910 683 aaKnown RBP7.53□□□□□ -1.2
VPS36YLR417W YBL113CQ7M4S9 792 aa7.53□□□□□ -1.2
VPS36YLR417W NOP7P53261 605 aaKnown RBP7.52□□□□□ -1.2
VPS36YLR417W TSC13Q99190 310 aa7.52□□□□□ -1.2
VPS36YLR417W GAS4Q08271 471 aa7.52□□□□□ -1.21
VPS36YLR417W AIR2Q12476 344 aaKnown RBP7.52□□□□□ -1.21
VPS36YLR417W SEC20P28791 383 aa7.51□□□□□ -1.21
VPS36YLR417W RRD1P40454 393 aaKnown RBP7.51□□□□□ -1.21
VPS36YLR417W ROM1P53046 1155 aa7.51□□□□□ -1.21
VPS36YLR417W KAR5Q04746 504 aa7.51□□□□□ -1.21
VPS36YLR417W TPS3P38426 1054 aaKnown RBP7.5□□□□□ -1.21
VPS36YLR417W ERP5P38819 212 aa7.5□□□□□ -1.21
VPS36YLR417W MOD5P07884 428 aa7.49□□□□□ -1.21
VPS36YLR417W PRE3P38624 215 aa7.49□□□□□ -1.21
VPS36YLR417W YFL034WP43564 1073 aa7.49□□□□□ -1.21
VPS36YLR417W SAS4Q04003 481 aa7.49□□□□□ -1.21
VPS36YLR417W IXR1P33417 597 aa7.48□□□□□ -1.21
VPS36YLR417W TRL1P09880 827 aaKnown RBP7.47□□□□□ -1.21
VPS36YLR417W SRS2P12954 1174 aa7.47□□□□□ -1.21
VPS36YLR417W PDI1P17967 522 aaKnown RBP7.47□□□□□ -1.21
VPS36YLR417W ASF1P32447 279 aa7.47□□□□□ -1.21
VPS36YLR417W RRN6P32786 894 aa7.47□□□□□ -1.21
VPS36YLR417W PNP1Q05788 311 aa7.47□□□□□ -1.21
VPS36YLR417W MSC6Q08818 692 aaKnown RBP7.47□□□□□ -1.21
VPS36YLR417W IPL1P38991 367 aa7.47□□□□□ -1.21
VPS36YLR417W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.47□□□□□ -1.21not detected
VPS36YLR417W VAN1P23642 535 aa7.46□□□□□ -1.22
VPS36YLR417W ISR1Q06098 443 aaKnown RBP7.46□□□□□ -1.22
VPS36YLR417W PUN1Q06991 263 aa7.46□□□□□ -1.22
VPS36YLR417W BUD31P25337 157 aaPredicted RBP7.45□□□□□ -1.22
VPS36YLR417W HAL5P38970 855 aaKnown RBP7.45□□□□□ -1.22
VPS36YLR417W CHL1P22516 861 aaPredicted RBP7.44□□□□□ -1.22
VPS36YLR417W ATG20Q07528 640 aa7.44□□□□□ -1.22
VPS36YLR417W AIM9P40053 627 aaKnown RBP7.44□□□□□ -1.22
VPS36YLR417W MDJ2P42834 146 aa7.44□□□□□ -1.22
VPS36YLR417W ATG1P53104 897 aa7.44□□□□□ -1.22
VPS36YLR417W GYP1Q08484 637 aa7.44□□□□□ -1.22
VPS36YLR417W BMT6Q12291 365 aa7.44□□□□□ -1.22
VPS36YLR417W TRS33Q99394 268 aa7.44□□□□□ -1.22
VPS36YLR417W MIP1P15801 1254 aa7.43□□□□□ -1.22
VPS36YLR417W HDA3Q06623 655 aa7.43□□□□□ -1.22
VPS36YLR417W FUR4P05316 633 aaKnown RBP7.42□□□□□ -1.22
VPS36YLR417W GRS1P38088 690 aaKnown RBP7.42□□□□□ -1.22
VPS36YLR417W YHL050CP38721 697 aa7.42□□□□□ -1.22
VPS36YLR417W YHR219WP38900 624 aa7.42□□□□□ -1.22
VPS36YLR417W PAM1P37304 830 aaKnown RBP7.41□□□□□ -1.22
VPS36YLR417W BOL3P39724 118 aa7.41□□□□□ -1.22
VPS36YLR417W KIP2P28743 706 aa7.4□□□□□ -1.23
VPS36YLR417W NTH2P35172 780 aa7.4□□□□□ -1.23
VPS36YLR417W PPX1P38698 397 aa7.4□□□□□ -1.23
VPS36YLR417W ACF4P47129 309 aa7.4□□□□□ -1.23
VPS36YLR417W ITT1Q04638 464 aa7.4□□□□□ -1.23
VPS36YLR417W AIM44Q99299 758 aa7.4□□□□□ -1.23
VPS36YLR417W UBP1P25037 809 aa7.39□□□□□ -1.23
VPS36YLR417W MRF1P30775 413 aaPredicted RBP7.39□□□□□ -1.23
VPS36YLR417W ALD4P46367 519 aaKnown RBP7.39□□□□□ -1.23
VPS36YLR417W MET10P39692 1035 aa7.38□□□□□ -1.23
VPS36YLR417W EMW1P42842 904 aaKnown RBP7.38□□□□□ -1.23
VPS36YLR417W YJL171CP46992 396 aa7.38□□□□□ -1.23
VPS36YLR417W CWH41P53008 833 aa7.38□□□□□ -1.23
VPS36YLR417W SYH1Q02875 849 aaKnown RBP7.37□□□□□ -1.23
VPS36YLR417W SPT2P06843 333 aaPredicted RBP7.36□□□□□ -1.23
VPS36YLR417W GLO3P38682 493 aaKnown RBP7.36□□□□□ -1.23
VPS36YLR417W QDR1P40475 563 aa7.36□□□□□ -1.23
VPS36YLR417W LSO1Q3E827 93 aa7.36□□□□□ -1.23
VPS36YLR417W CYT1P07143 309 aa7.35□□□□□ -1.23
VPS36YLR417W RPS6AP0CX37 236 aaKnown RBP7.35□□□□□ -1.23
VPS36YLR417W RPS6BP0CX38 236 aaPredicted RBP7.35□□□□□ -1.23
VPS36YLR417W SUV3P32580 737 aa7.35□□□□□ -1.23
VPS36YLR417W NGR1P32831 672 aaKnown RBP7.35□□□□□ -1.23
VPS36YLR417W RRP15Q06511 250 aaPredicted RBP7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms