RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C TAF7Q05021 590 aa7.73□□□□□ -1.17
USB1YLR132C YDR444WQ04093 687 aa7.72□□□□□ -1.17
USB1YLR132C MAK16P10962 306 aaPredicted RBP7.71□□□□□ -1.18
USB1YLR132C PTK2P47116 818 aaKnown RBP7.7□□□□□ -1.18
USB1YLR132C APP1P53933 587 aa7.7□□□□□ -1.18
USB1YLR132C HPC2Q01448 625 aa7.7□□□□□ -1.18
USB1YLR132C LCB5Q06147 687 aaKnown RBP7.7□□□□□ -1.18
USB1YLR132C TEC1P18412 486 aa7.69□□□□□ -1.18
USB1YLR132C RGA2Q06407 1009 aa7.69□□□□□ -1.18
USB1YLR132C GBP2P25555 427 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
USB1YLR132C YBL086CP38177 466 aa7.68□□□□□ -1.18
USB1YLR132C RTT106P40161 455 aa7.68□□□□□ -1.18
USB1YLR132C EMW1P42842 904 aaKnown RBP7.68□□□□□ -1.18
USB1YLR132C YPL062WQ02781 134 aa7.68□□□□□ -1.18
USB1YLR132C YPR084WQ06821 456 aa7.68□□□□□ -1.18
USB1YLR132C SRF1Q12516 437 aa7.66□□□□□ -1.18
USB1YLR132C NAF1P53919 492 aaKnown RBP7.64□□□□□ -1.19
USB1YLR132C TFB3Q03290 321 aa7.64□□□□□ -1.19
USB1YLR132C CSE4P36012 229 aa7.62□□□□□ -1.19
USB1YLR132C BRL1P38770 471 aa7.62□□□□□ -1.19
USB1YLR132C GUT2P32191 649 aa7.61□□□□□ -1.19
USB1YLR132C AAD14P42884 376 aa7.61□□□□□ -1.19
USB1YLR132C NUP85P46673 744 aa7.61□□□□□ -1.19
USB1YLR132C OPT2Q06593 877 aa7.61□□□□□ -1.19
USB1YLR132C YDL176WQ12027 708 aa7.61□□□□□ -1.19
USB1YLR132C PKC1P24583 1151 aa7.6□□□□□ -1.19
USB1YLR132C MKS1P34072 584 aa7.6□□□□□ -1.19
USB1YLR132C YBL036CP38197 257 aa7.6□□□□□ -1.19
USB1YLR132C ARG82P07250 355 aa7.59□□□□□ -1.19
USB1YLR132C FRA1Q07825 749 aa7.58□□□□□ -1.2
USB1YLR132C STE20Q03497 939 aaKnown RBP7.57□□□□□ -1.2
USB1YLR132C DFG5Q05031 458 aa7.57□□□□□ -1.2
USB1YLR132C YLR346CQ06139 101 aa7.57□□□□□ -1.2
USB1YLR132C SPT5P27692 1063 aaKnown RBP7.56□□□□□ -1.2
USB1YLR132C YDJ1P25491 409 aaKnown RBP7.55□□□□□ -1.2
USB1YLR132C FBP26P32604 452 aa7.55□□□□□ -1.2
USB1YLR132C DLD1P32891 587 aa7.55□□□□□ -1.2
USB1YLR132C GLY1P37303 387 aaKnown RBP7.55□□□□□ -1.2
USB1YLR132C MCM16Q12262 181 aa7.55□□□□□ -1.2
USB1YLR132C BIO2P32451 375 aa7.54□□□□□ -1.2
USB1YLR132C HGH1P48362 394 aaKnown RBP7.54□□□□□ -1.2
USB1YLR132C LSC2P53312 427 aa7.54□□□□□ -1.2
USB1YLR132C ISF1P32488 338 aa7.53□□□□□ -1.2
USB1YLR132C ATG20Q07528 640 aa7.53□□□□□ -1.2
USB1YLR132C STE6P12866 1290 aa7.52□□□□□ -1.21
USB1YLR132C MIP1P15801 1254 aa7.52□□□□□ -1.21
USB1YLR132C ACO2P39533 789 aa7.52□□□□□ -1.21
USB1YLR132C EMP47P43555 445 aa7.52□□□□□ -1.21
USB1YLR132C YJR098CP47139 656 aa7.52□□□□□ -1.21
USB1YLR132C CAF120P53836 1060 aa7.52□□□□□ -1.21
USB1YLR132C BDS1Q08347 646 aa7.52□□□□□ -1.21
USB1YLR132C SCW11P53189 542 aa7.51□□□□□ -1.21
USB1YLR132C ISU1Q03020 165 aa7.5□□□□□ -1.21
USB1YLR132C TY1A-BLQ12266 440 aa7.5□□□□□ -1.21
USB1YLR132C APL6P46682 809 aa7.49□□□□□ -1.21
USB1YLR132C MRX12P47084 519 aa7.49□□□□□ -1.21
USB1YLR132C DMA2P53924 522 aa7.49□□□□□ -1.21
USB1YLR132C TCB1Q12466 1186 aa7.49□□□□□ -1.21
USB1YLR132C UBP2Q01476 1272 aa7.47□□□□□ -1.21
USB1YLR132C SUP45P12385 437 aaKnown RBP7.46□□□□□ -1.22
USB1YLR132C YIR007WP40566 764 aa7.46□□□□□ -1.22
USB1YLR132C YNL108CP53929 270 aa7.46□□□□□ -1.22
USB1YLR132C ENO2P00925 437 aaKnown RBP7.45□□□□□ -1.22
USB1YLR132C ISR1Q06098 443 aaKnown RBP7.45□□□□□ -1.22
USB1YLR132C HAL5P38970 855 aaKnown RBP7.43□□□□□ -1.22
USB1YLR132C YPP1P46951 817 aa7.43□□□□□ -1.22
USB1YLR132C YJL007CP47080 104 aa7.43□□□□□ -1.22
USB1YLR132C OSH7P38755 437 aa7.41□□□□□ -1.22
USB1YLR132C RPP2BP02400 110 aaKnown RBP7.4□□□□□ -1.22
USB1YLR132C RIM21P48565 533 aa7.4□□□□□ -1.22
USB1YLR132C WTM2Q12206 467 aa7.4□□□□□ -1.22
USB1YLR132C SPT2P06843 333 aaPredicted RBP7.39□□□□□ -1.23
USB1YLR132C SOH1P38633 127 aa7.39□□□□□ -1.23
USB1YLR132C ROG3P43602 733 aa7.39□□□□□ -1.23
USB1YLR132C UTR2P32623 467 aa7.38□□□□□ -1.23
USB1YLR132C DLD3P39976 496 aaKnown RBP7.38□□□□□ -1.23
USB1YLR132C BIM1P40013 344 aa7.38□□□□□ -1.23
USB1YLR132C ATG32P40458 529 aa7.38□□□□□ -1.23
USB1YLR132C TY1A-MR1Q04215 440 aa7.38□□□□□ -1.23
USB1YLR132C ATG3P40344 310 aa7.37□□□□□ -1.23
USB1YLR132C VTC4P47075 721 aa7.37□□□□□ -1.23
USB1YLR132C UTP13Q05946 817 aaKnown RBP7.37□□□□□ -1.23
USB1YLR132C CDC19P00549 500 aaKnown RBP7.36□□□□□ -1.23
USB1YLR132C RDS2P19541 446 aaKnown RBP7.36□□□□□ -1.23
USB1YLR132C DAT1P13483 248 aaKnown RBP7.35□□□□□ -1.23
USB1YLR132C CCP1P00431 361 aa7.34□□□□□ -1.23
USB1YLR132C DAL1P32375 460 aa7.34□□□□□ -1.23
USB1YLR132C YGR035CP53222 116 aa7.34□□□□□ -1.23
USB1YLR132C HPF1Q05164 967 aa7.34□□□□□ -1.23
USB1YLR132C HDA3Q06623 655 aa7.34□□□□□ -1.23
USB1YLR132C TIF1P10081 395 aaKnown RBP7.33□□□□□ -1.24
USB1YLR132C NAM8Q00539 523 aaKnown RBP7.33□□□□□ -1.24
USB1YLR132C MRX10Q05648 414 aa7.33□□□□□ -1.24
USB1YLR132C ENO1P00924 437 aaKnown RBP7.32□□□□□ -1.24
USB1YLR132C SSN3P39073 555 aa7.32□□□□□ -1.24
USB1YLR132C TBS1P38114 1094 aa7.31□□□□□ -1.24
USB1YLR132C SLX8P40072 274 aa7.31□□□□□ -1.24
USB1YLR132C RTG2P32608 588 aaKnown RBP7.3□□□□□ -1.24
USB1YLR132C UTP7P40055 554 aaKnown RBP7.3□□□□□ -1.24
USB1YLR132C MSN5P52918 1224 aa7.3□□□□□ -1.24
Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms