RNA–Protein interactions for RNA: YLR047C

FRE8, Transcript of Protein with sequence similarity to iron/copper reductases, yeast

Gene FRE8, Length 2,061 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FRE8	YLR047C	CDC3	P32457	520 aa	Known RBP	4.69	□□□□□ -1.66
FRE8	YLR047C	JIP4	Q03361	876 aa		4.69	□□□□□ -1.66
FRE8	YLR047C	NTE1	Q04958	1679 aa		4.69	□□□□□ -1.66
FRE8	YLR047C	STU1	P38198	1513 aa		4.69	□□□□□ -1.66
FRE8	YLR047C	BUD31	P25337	157 aa	Predicted RBP	4.68	□□□□□ -1.66
FRE8	YLR047C	RSC30	P38781	883 aa		4.68	□□□□□ -1.66
FRE8	YLR047C	ORC1	P54784	914 aa	Predicted RBP	4.68	□□□□□ -1.66
FRE8	YLR047C	MRX10	Q05648	414 aa		4.68	□□□□□ -1.66
FRE8	YLR047C	DRS2	P39524	1355 aa		4.67	□□□□□ -1.66
FRE8	YLR047C	TSC11	P40061	1430 aa		4.67	□□□□□ -1.66
FRE8	YLR047C	VTH1	P40438	1549 aa		4.66	□□□□□ -1.66
FRE8	YLR047C	VTH2	P40890	1549 aa		4.66	□□□□□ -1.66
FRE8	YLR047C	SLD2	P34252	453 aa		4.66	□□□□□ -1.66
FRE8	YLR047C	SSF1	P38789	453 aa	Predicted RBP	4.66	□□□□□ -1.66
FRE8	YLR047C	TUM1	Q08686	304 aa	Known RBP	4.66	□□□□□ -1.66
FRE8	YLR047C	LDB19	Q12502	818 aa		4.66	□□□□□ -1.66
FRE8	YLR047C	RPO21	P04050	1733 aa	Known RBP	4.66	□□□□□ -1.66
FRE8	YLR047C	RIM21	P48565	533 aa		4.66	□□□□□ -1.66
FRE8	YLR047C	MAK16	P10962	306 aa	Predicted RBP	4.65	□□□□□ -1.66
FRE8	YLR047C	YNL035C	P53962	389 aa	Known RBP	4.65	□□□□□ -1.66
FRE8	YLR047C	SEN54	Q02825	467 aa	Predicted RBP	4.65	□□□□□ -1.66
FRE8	YLR047C	TFB4	Q12004	338 aa		4.65	□□□□□ -1.66
FRE8	YLR047C	HAT1	Q12341	374 aa		4.65	□□□□□ -1.66
FRE8	YLR047C	IRC20	Q06554	1556 aa		4.65	□□□□□ -1.66
FRE8	YLR047C	SLY41	P22215	453 aa		4.65	□□□□□ -1.67
FRE8	YLR047C	TGL4	P36165	910 aa		4.65	□□□□□ -1.67
FRE8	YLR047C	RPP1B	P10622	106 aa	Known RBP	4.64	□□□□□ -1.67
FRE8	YLR047C	SPT5	P27692	1063 aa	Known RBP	4.63	□□□□□ -1.67
FRE8	YLR047C	MID1	P41821	548 aa		4.63	□□□□□ -1.67
FRE8	YLR047C	PEX21	P50091	288 aa		4.63	□□□□□ -1.67
FRE8	YLR047C	MYO4	P32492	1471 aa		4.63	□□□□□ -1.67
FRE8	YLR047C	RTG1	P32607	177 aa		4.63	□□□□□ -1.67
FRE8	YLR047C	SEC61	P32915	480 aa		4.63	□□□□□ -1.67
FRE8	YLR047C	PML39	Q03760	334 aa		4.63	□□□□□ -1.67
FRE8	YLR047C	SIS2	P36024	562 aa		4.62	□□□□□ -1.67
FRE8	YLR047C	AIM44	Q99299	758 aa		4.62	□□□□□ -1.67
FRE8	YLR047C	RDS2	P19541	446 aa	Known RBP	4.61	□□□□□ -1.67
FRE8	YLR047C	PEP12	P32854	288 aa		4.61	□□□□□ -1.67
FRE8	YLR047C	LAM6	Q08001	693 aa		4.61	□□□□□ -1.67
FRE8	YLR047C	DNF2	Q12675	1612 aa		4.61	□□□□□ -1.67
FRE8	YLR047C	NOP7	P53261	605 aa	Known RBP	4.61	□□□□□ -1.67
FRE8	YLR047C	YNL115C	P53925	644 aa		4.61	□□□□□ -1.67
FRE8	YLR047C	YRR1	Q12172	810 aa		4.61	□□□□□ -1.67
FRE8	YLR047C	SNT2	P53127	1403 aa		4.61	□□□□□ -1.67
FRE8	YLR047C	NUP170	P38181	1502 aa		4.6	□□□□□ -1.67
FRE8	YLR047C	TRM1	P15565	570 aa	Known RBP	4.6	□□□□□ -1.67
FRE8	YLR047C	RRN6	P32786	894 aa		4.6	□□□□□ -1.67
FRE8	YLR047C	ECM23	Q02710	187 aa		4.6	□□□□□ -1.67
FRE8	YLR047C	MPC54	Q08550	464 aa		4.6	□□□□□ -1.67
FRE8	YLR047C	SNQ2	P32568	1501 aa	Known RBP	4.6	□□□□□ -1.67
FRE8	YLR047C	HEM3	P28789	327 aa		4.6	□□□□□ -1.67
FRE8	YLR047C	KTR7	P40504	517 aa		4.6	□□□□□ -1.67
FRE8	YLR047C	SNU71	P53207	620 aa	Known RBP	4.6	□□□□□ -1.67
FRE8	YLR047C	PAM1	P37304	830 aa	Known RBP	4.59	□□□□□ -1.67
FRE8	YLR047C	ERF2	Q06551	359 aa		4.59	□□□□□ -1.67
FRE8	YLR047C	KEX2	P13134	814 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	FKH1	P40466	484 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	DPL1	Q05567	589 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	NCR1	Q12200	1170 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	SPO14	P36126	1683 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	ISF1	P32488	338 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	IPL1	P38991	367 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	RTF1	P53064	558 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	MCM16	Q12262	181 aa		4.58	□□□□□ -1.68
FRE8	YLR047C	ULS1	Q08562	1619 aa		4.57	□□□□□ -1.68
FRE8	YLR047C	MET10	P39692	1035 aa		4.57	□□□□□ -1.68
FRE8	YLR047C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
FRE8	YLR047C	PUS6	P53294	404 aa		4.57	□□□□□ -1.68
FRE8	YLR047C	NAF1	P53919	492 aa	Known RBP	4.57	□□□□□ -1.68
FRE8	YLR047C	PEX29	Q03370	554 aa		4.57	□□□□□ -1.68
FRE8	YLR047C	YDL129W	Q07555	291 aa		4.57	□□□□□ -1.68
FRE8	YLR047C	YTA7	P40340	1379 aa		4.56	□□□□□ -1.68
FRE8	YLR047C	TPS3	P38426	1054 aa	Known RBP	4.56	□□□□□ -1.68
FRE8	YLR047C	YPP1	P46951	817 aa		4.56	□□□□□ -1.68
FRE8	YLR047C	YDR344C	Q05510	147 aa		4.56	□□□□□ -1.68
FRE8	YLR047C	AIR2	Q12476	344 aa	Known RBP	4.56	□□□□□ -1.68
FRE8	YLR047C	YBL113C	Q7M4S9	792 aa		4.56	□□□□□ -1.68
FRE8	YLR047C	UBX7	P38349	436 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	ERP5	P38819	212 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	NMA111	P53920	997 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	STH1	P32597	1359 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	GAL2	P13181	574 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	EMP47	P43555	445 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	PDR12	Q02785	1511 aa		4.55	□□□□□ -1.68
FRE8	YLR047C	NUD1	P32336	851 aa		4.54	□□□□□ -1.68
FRE8	YLR047C	ISU2	Q12056	156 aa		4.54	□□□□□ -1.68
FRE8	YLR047C	DOP1	Q03921	1698 aa		4.54	□□□□□ -1.68
FRE8	YLR047C	ENV9	Q08651	330 aa		4.53	□□□□□ -1.68
FRE8	YLR047C	STM1	P39015	273 aa	Known RBP	4.53	□□□□□ -1.68
FRE8	YLR047C	TFG1	P41895	735 aa	Predicted RBP	4.53	□□□□□ -1.68
FRE8	YLR047C	SIS1	P25294	352 aa	Known RBP	4.52	□□□□□ -1.69
FRE8	YLR047C	SAP30	P38429	201 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	ALD2	P47771	506 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	TBF1	Q02457	562 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	YDL206W	Q12424	762 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	TRM3	Q07527	1436 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	MLP2	P40457	1679 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	YOR093C	Q12275	1648 aa		4.52	□□□□□ -1.69
FRE8	YLR047C	TRL1	P09880	827 aa	Known RBP	4.52	□□□□□ -1.69
FRE8	YLR047C	PDR1	P12383	1068 aa		4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 40.3 ms