RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YPR204W	Q08995	1032 aa		7.65	□□□□□ -1.18
EBP2	YKL172W	AMS1	P22855	1083 aa		7.64	□□□□□ -1.19
EBP2	YKL172W	BDP1	P46678	594 aa		7.64	□□□□□ -1.19
EBP2	YKL172W	ATG3	P40344	310 aa		7.63	□□□□□ -1.19
EBP2	YKL172W	STE20	Q03497	939 aa	Known RBP	7.63	□□□□□ -1.19
EBP2	YKL172W	FRA1	Q07825	749 aa		7.63	□□□□□ -1.19
EBP2	YKL172W	KIP2	P28743	706 aa		7.62	□□□□□ -1.19
EBP2	YKL172W	CST6	P40535	587 aa		7.62	□□□□□ -1.19
EBP2	YKL172W	SYH1	Q02875	849 aa	Known RBP	7.62	□□□□□ -1.19
EBP2	YKL172W	FRK1	Q03002	865 aa	Predicted RBP	7.62	□□□□□ -1.19
EBP2	YKL172W	ENO1	P00924	437 aa	Known RBP	7.6	□□□□□ -1.19
EBP2	YKL172W	SSA4	P22202	642 aa	Known RBP	7.6	□□□□□ -1.19
EBP2	YKL172W	EMP47	P43555	445 aa		7.6	□□□□□ -1.19
EBP2	YKL172W	MRX10	Q05648	414 aa		7.6	□□□□□ -1.19
EBP2	YKL172W	YPR084W	Q06821	456 aa		7.6	□□□□□ -1.19
EBP2	YKL172W	IXR1	P33417	597 aa		7.59	□□□□□ -1.19
EBP2	YKL172W	PUS5	Q06244	254 aa		7.57	□□□□□ -1.2
EBP2	YKL172W	ISF1	P32488	338 aa		7.56	□□□□□ -1.2
EBP2	YKL172W	TTI1	P36097	1038 aa		7.56	□□□□□ -1.2
EBP2	YKL172W	HED1	Q03937	162 aa		7.56	□□□□□ -1.2
EBP2	YKL172W	UTP13	Q05946	817 aa	Known RBP	7.56	□□□□□ -1.2
EBP2	YKL172W	ENV9	Q08651	330 aa		7.56	□□□□□ -1.2
EBP2	YKL172W	DPS1	P04802	557 aa	Known RBP	7.54	□□□□□ -1.2
EBP2	YKL172W	APL6	P46682	809 aa		7.53	□□□□□ -1.2
EBP2	YKL172W	CPS1	P27614	576 aa		7.52	□□□□□ -1.21
EBP2	YKL172W	RDS2	P19541	446 aa	Known RBP	7.51	□□□□□ -1.21
EBP2	YKL172W	SUB2	Q07478	446 aa	Known RBP	7.51	□□□□□ -1.21
EBP2	YKL172W	RAS1	P01119	309 aa		7.5	□□□□□ -1.21
EBP2	YKL172W	PEP12	P32854	288 aa		7.5	□□□□□ -1.21
EBP2	YKL172W	RTT106	P40161	455 aa		7.5	□□□□□ -1.21
EBP2	YKL172W	EMW1	P42842	904 aa	Known RBP	7.5	□□□□□ -1.21
EBP2	YKL172W	MRT4	P33201	236 aa	Known RBP	7.49	□□□□□ -1.21
EBP2	YKL172W	ATG20	Q07528	640 aa		7.49	□□□□□ -1.21
EBP2	YKL172W	SSA1	P10591	642 aa	Known RBP	7.48	□□□□□ -1.21
EBP2	YKL172W	SOH1	P38633	127 aa		7.48	□□□□□ -1.21
EBP2	YKL172W	APP1	P53933	587 aa		7.47	□□□□□ -1.21
EBP2	YKL172W	CDC4	P07834	779 aa		7.46	□□□□□ -1.22
EBP2	YKL172W	TGL4	P36165	910 aa		7.46	□□□□□ -1.22
EBP2	YKL172W	RPP2B	P02400	110 aa	Known RBP	7.45	□□□□□ -1.22
EBP2	YKL172W	ISR1	Q06098	443 aa	Known RBP	7.45	□□□□□ -1.22
EBP2	YKL172W	FBP26	P32604	452 aa		7.44	□□□□□ -1.22
EBP2	YKL172W	MKS1	P34072	584 aa		7.44	□□□□□ -1.22
EBP2	YKL172W	ITT1	Q04638	464 aa		7.44	□□□□□ -1.22
EBP2	YKL172W	KTR7	P40504	517 aa		7.43	□□□□□ -1.22
EBP2	YKL172W	YFL034W	P43564	1073 aa		7.43	□□□□□ -1.22
EBP2	YKL172W	GAL2	P13181	574 aa		7.42	□□□□□ -1.22
EBP2	YKL172W	PUP1	P25043	261 aa		7.42	□□□□□ -1.22
EBP2	YKL172W	YBL086C	P38177	466 aa		7.42	□□□□□ -1.22
EBP2	YKL172W	CLA4	P48562	842 aa		7.42	□□□□□ -1.22
EBP2	YKL172W	HAP4	P14064	554 aa		7.41	□□□□□ -1.22
EBP2	YKL172W	PHO87	P25360	923 aa		7.41	□□□□□ -1.22
EBP2	YKL172W	HST3	P53687	447 aa		7.41	□□□□□ -1.22
EBP2	YKL172W	ISU1	Q03020	165 aa		7.41	□□□□□ -1.22
EBP2	YKL172W	MET32	Q12041	191 aa		7.41	□□□□□ -1.22
EBP2	YKL172W	AFT1	P22149	690 aa		7.4	□□□□□ -1.22
EBP2	YKL172W	GEF1	P37020	779 aa		7.4	□□□□□ -1.22
EBP2	YKL172W	HAL5	P38970	855 aa	Known RBP	7.4	□□□□□ -1.22
EBP2	YKL172W	MSB3	P48566	633 aa	Predicted RBP	7.4	□□□□□ -1.22
EBP2	YKL172W	NOB1	Q08444	459 aa	Known RBP	7.4	□□□□□ -1.22
EBP2	YKL172W	TSC13	Q99190	310 aa		7.4	□□□□□ -1.22
EBP2	YKL172W	AIR1	P40507	360 aa	Known RBP	7.39	□□□□□ -1.23
EBP2	YKL172W	RPL34A	P87262	121 aa	Predicted RBP	7.39	□□□□□ -1.23
EBP2	YKL172W	ECM23	Q02710	187 aa		7.39	□□□□□ -1.23
EBP2	YKL172W	SPT2	P06843	333 aa	Predicted RBP	7.38	□□□□□ -1.23
EBP2	YKL172W	MIP1	P15801	1254 aa		7.38	□□□□□ -1.23
EBP2	YKL172W	UGA3	P26370	528 aa		7.38	□□□□□ -1.23
EBP2	YKL172W	UTR2	P32623	467 aa		7.38	□□□□□ -1.23
EBP2	YKL172W	AIM9	P40053	627 aa	Known RBP	7.38	□□□□□ -1.23
EBP2	YKL172W	HDA3	Q06623	655 aa		7.38	□□□□□ -1.23
EBP2	YKL172W	GAS4	Q08271	471 aa		7.38	□□□□□ -1.23
EBP2	YKL172W	BDS1	Q08347	646 aa		7.38	□□□□□ -1.23
EBP2	YKL172W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	7.38	□□□□□ -1.23	not detected
EBP2	YKL172W	STE6	P12866	1290 aa		7.37	□□□□□ -1.23
EBP2	YKL172W	TBS1	P38114	1094 aa		7.37	□□□□□ -1.23
EBP2	YKL172W	ASH1	P34233	588 aa		7.36	□□□□□ -1.23
EBP2	YKL172W	DFG5	Q05031	458 aa		7.36	□□□□□ -1.23
EBP2	YKL172W	TRK1	P12685	1235 aa		7.35	□□□□□ -1.23
EBP2	YKL172W	ACS2	P52910	683 aa	Known RBP	7.35	□□□□□ -1.23
EBP2	YKL172W	PDI1	P17967	522 aa	Known RBP	7.34	□□□□□ -1.23
EBP2	YKL172W	UBX7	P38349	436 aa		7.34	□□□□□ -1.23
EBP2	YKL172W	DLD3	P39976	496 aa	Known RBP	7.34	□□□□□ -1.23
EBP2	YKL172W	YML083C	Q04526	418 aa		7.34	□□□□□ -1.23
EBP2	YKL172W	DAT1	P13483	248 aa	Known RBP	7.33	□□□□□ -1.24
EBP2	YKL172W	ARG82	P07250	355 aa		7.32	□□□□□ -1.24
EBP2	YKL172W	PUF6	Q04373	656 aa	Known RBP	7.32	□□□□□ -1.24
EBP2	YKL172W	SLX8	P40072	274 aa		7.31	□□□□□ -1.24
EBP2	YKL172W	SRF1	Q12516	437 aa		7.31	□□□□□ -1.24
EBP2	YKL172W	RPS6A	P0CX37	236 aa	Known RBP	7.3	□□□□□ -1.24
EBP2	YKL172W	RPS6B	P0CX38	236 aa	Predicted RBP	7.3	□□□□□ -1.24
EBP2	YKL172W	VAN1	P23642	535 aa		7.3	□□□□□ -1.24
EBP2	YKL172W	NTH2	P35172	780 aa		7.3	□□□□□ -1.24
EBP2	YKL172W	ROM1	P53046	1155 aa		7.3	□□□□□ -1.24
EBP2	YKL172W	WTM2	Q12206	467 aa		7.3	□□□□□ -1.24
EBP2	YKL172W	SWI5	P08153	709 aa		7.29	□□□□□ -1.24
EBP2	YKL172W	UBP1	P25037	809 aa		7.29	□□□□□ -1.24
EBP2	YKL172W	GCR2	Q01722	534 aa		7.29	□□□□□ -1.24
EBP2	YKL172W	TRS33	Q99394	268 aa		7.29	□□□□□ -1.24
EBP2	YKL172W	CYT1	P07143	309 aa		7.28	□□□□□ -1.24
EBP2	YKL172W	AAD14	P42884	376 aa		7.28	□□□□□ -1.24
EBP2	YKL172W	PTK2	P47116	818 aa	Known RBP	7.28	□□□□□ -1.24

Retrieved 100 of 5,963 RNA–protein pairs in 66.3 ms