RNA–Protein interactions for RNA: YJL061W

NUP82, Transcript of Linker nucleoporin component of the nuclear pore complex (NPC), yeast

Gene NUP82, Length 2,142 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP82	YJL061W	AMS1	P22855	1083 aa		4.19	□□□□□ -1.74
NUP82	YJL061W	MRX12	P47084	519 aa		4.19	□□□□□ -1.74
NUP82	YJL061W	RIM21	P48565	533 aa		4.19	□□□□□ -1.74
NUP82	YJL061W	STE20	Q03497	939 aa	Known RBP	4.19	□□□□□ -1.74
NUP82	YJL061W	KIP2	P28743	706 aa		4.19	□□□□□ -1.74
NUP82	YJL061W	SIS2	P36024	562 aa		4.19	□□□□□ -1.74
NUP82	YJL061W	CST6	P40535	587 aa		4.19	□□□□□ -1.74
NUP82	YJL061W	ATG3	P40344	310 aa		4.18	□□□□□ -1.74
NUP82	YJL061W	SYH1	Q02875	849 aa	Known RBP	4.18	□□□□□ -1.74
NUP82	YJL061W	FRA1	Q07825	749 aa		4.18	□□□□□ -1.74
NUP82	YJL061W	ENO1	P00924	437 aa	Known RBP	4.18	□□□□□ -1.74
NUP82	YJL061W	IXR1	P33417	597 aa		4.18	□□□□□ -1.74
NUP82	YJL061W	EMP47	P43555	445 aa		4.18	□□□□□ -1.74
NUP82	YJL061W	MRX10	Q05648	414 aa		4.18	□□□□□ -1.74
NUP82	YJL061W	PUS5	Q06244	254 aa		4.18	□□□□□ -1.74
NUP82	YJL061W	ISF1	P32488	338 aa		4.17	□□□□□ -1.74
NUP82	YJL061W	YPR084W	Q06821	456 aa		4.17	□□□□□ -1.74
NUP82	YJL061W	SSA4	P22202	642 aa	Known RBP	4.16	□□□□□ -1.74
NUP82	YJL061W	ENV9	Q08651	330 aa		4.16	□□□□□ -1.74
NUP82	YJL061W	TTI1	P36097	1038 aa		4.15	□□□□□ -1.74
NUP82	YJL061W	HED1	Q03937	162 aa		4.15	□□□□□ -1.74
NUP82	YJL061W	DPS1	P04802	557 aa	Known RBP	4.15	□□□□□ -1.75
NUP82	YJL061W	CPS1	P27614	576 aa		4.14	□□□□□ -1.75
NUP82	YJL061W	UTP13	Q05946	817 aa	Known RBP	4.14	□□□□□ -1.75
NUP82	YJL061W	RAS1	P01119	309 aa		4.13	□□□□□ -1.75
NUP82	YJL061W	RDS2	P19541	446 aa	Known RBP	4.13	□□□□□ -1.75
NUP82	YJL061W	APL6	P46682	809 aa		4.13	□□□□□ -1.75
NUP82	YJL061W	PEP12	P32854	288 aa		4.12	□□□□□ -1.75
NUP82	YJL061W	SUB2	Q07478	446 aa	Known RBP	4.12	□□□□□ -1.75
NUP82	YJL061W	SOH1	P38633	127 aa		4.12	□□□□□ -1.75
NUP82	YJL061W	EMW1	P42842	904 aa	Known RBP	4.12	□□□□□ -1.75
NUP82	YJL061W	MRT4	P33201	236 aa	Known RBP	4.11	□□□□□ -1.75
NUP82	YJL061W	ITT1	Q04638	464 aa		4.11	□□□□□ -1.75
NUP82	YJL061W	ATG20	Q07528	640 aa		4.11	□□□□□ -1.75
NUP82	YJL061W	APP1	P53933	587 aa		4.1	□□□□□ -1.75
NUP82	YJL061W	CDC4	P07834	779 aa		4.1	□□□□□ -1.75
NUP82	YJL061W	SSA1	P10591	642 aa	Known RBP	4.1	□□□□□ -1.75
NUP82	YJL061W	TGL4	P36165	910 aa		4.1	□□□□□ -1.75
NUP82	YJL061W	RTT106	P40161	455 aa		4.1	□□□□□ -1.75
NUP82	YJL061W	KTR7	P40504	517 aa		4.1	□□□□□ -1.75
NUP82	YJL061W	MKS1	P34072	584 aa		4.09	□□□□□ -1.75
NUP82	YJL061W	CLA4	P48562	842 aa		4.09	□□□□□ -1.75
NUP82	YJL061W	ISR1	Q06098	443 aa	Known RBP	4.09	□□□□□ -1.75
NUP82	YJL061W	RPP2B	P02400	110 aa	Known RBP	4.08	□□□□□ -1.76
NUP82	YJL061W	PUP1	P25043	261 aa		4.08	□□□□□ -1.76
NUP82	YJL061W	FBP26	P32604	452 aa		4.08	□□□□□ -1.76
NUP82	YJL061W	MET32	Q12041	191 aa		4.08	□□□□□ -1.76
NUP82	YJL061W	GAL2	P13181	574 aa		4.07	□□□□□ -1.76
NUP82	YJL061W	YBL086C	P38177	466 aa		4.07	□□□□□ -1.76
NUP82	YJL061W	YFL034W	P43564	1073 aa		4.07	□□□□□ -1.76
NUP82	YJL061W	HST3	P53687	447 aa		4.07	□□□□□ -1.76
NUP82	YJL061W	PHO87	P25360	923 aa		4.07	□□□□□ -1.76
NUP82	YJL061W	HAL5	P38970	855 aa	Known RBP	4.07	□□□□□ -1.76
NUP82	YJL061W	AIR1	P40507	360 aa	Known RBP	4.07	□□□□□ -1.76
NUP82	YJL061W	ISU1	Q03020	165 aa		4.07	□□□□□ -1.76
NUP82	YJL061W	HAP4	P14064	554 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	AFT1	P22149	690 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	ECM23	Q02710	187 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	NOB1	Q08444	459 aa	Known RBP	4.06	□□□□□ -1.76
NUP82	YJL061W	MIP1	P15801	1254 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	UGA3	P26370	528 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	ASH1	P34233	588 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	GEF1	P37020	779 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	RPL34A	P87262	121 aa	Predicted RBP	4.06	□□□□□ -1.76
NUP82	YJL061W	DFG5	Q05031	458 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	TSC13	Q99190	310 aa		4.06	□□□□□ -1.76
NUP82	YJL061W	SPT2	P06843	333 aa	Predicted RBP	4.05	□□□□□ -1.76
NUP82	YJL061W	STE6	P12866	1290 aa		4.05	□□□□□ -1.76
NUP82	YJL061W	UTR2	P32623	467 aa		4.05	□□□□□ -1.76
NUP82	YJL061W	AIM9	P40053	627 aa	Known RBP	4.05	□□□□□ -1.76
NUP82	YJL061W	MSB3	P48566	633 aa	Predicted RBP	4.05	□□□□□ -1.76
NUP82	YJL061W	HDA3	Q06623	655 aa		4.05	□□□□□ -1.76
NUP82	YJL061W	BDS1	Q08347	646 aa		4.05	□□□□□ -1.76
NUP82	YJL061W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	4.05	□□□□□ -1.76	not detected
NUP82	YJL061W	TBS1	P38114	1094 aa		4.04	□□□□□ -1.76
NUP82	YJL061W	GAS4	Q08271	471 aa		4.04	□□□□□ -1.76
NUP82	YJL061W	TRK1	P12685	1235 aa		4.04	□□□□□ -1.76
NUP82	YJL061W	DAT1	P13483	248 aa	Known RBP	4.04	□□□□□ -1.76
NUP82	YJL061W	PDI1	P17967	522 aa	Known RBP	4.04	□□□□□ -1.76
NUP82	YJL061W	ACS2	P52910	683 aa	Known RBP	4.04	□□□□□ -1.76
NUP82	YJL061W	YML083C	Q04526	418 aa		4.04	□□□□□ -1.76
NUP82	YJL061W	UBX7	P38349	436 aa		4.03	□□□□□ -1.76
NUP82	YJL061W	DLD3	P39976	496 aa	Known RBP	4.03	□□□□□ -1.76
NUP82	YJL061W	ARG82	P07250	355 aa		4.02	□□□□□ -1.77
NUP82	YJL061W	WTM2	Q12206	467 aa		4.02	□□□□□ -1.77
NUP82	YJL061W	SRF1	Q12516	437 aa		4.02	□□□□□ -1.77
NUP82	YJL061W	NTH2	P35172	780 aa		4.01	□□□□□ -1.77
NUP82	YJL061W	SLX8	P40072	274 aa		4.01	□□□□□ -1.77
NUP82	YJL061W	ROM1	P53046	1155 aa		4.01	□□□□□ -1.77
NUP82	YJL061W	RPS6A	P0CX37	236 aa	Known RBP	4.01	□□□□□ -1.77
NUP82	YJL061W	RPS6B	P0CX38	236 aa	Predicted RBP	4.01	□□□□□ -1.77
NUP82	YJL061W	VAN1	P23642	535 aa		4.01	□□□□□ -1.77
NUP82	YJL061W	PUF6	Q04373	656 aa	Known RBP	4.01	□□□□□ -1.77
NUP82	YJL061W	SWI5	P08153	709 aa		4	□□□□□ -1.77
NUP82	YJL061W	AAD14	P42884	376 aa		4	□□□□□ -1.77
NUP82	YJL061W	TRS33	Q99394	268 aa		4	□□□□□ -1.77
NUP82	YJL061W	CYT1	P07143	309 aa		4	□□□□□ -1.77
NUP82	YJL061W	PTK2	P47116	818 aa	Known RBP	4	□□□□□ -1.77
NUP82	YJL061W	YJR115W	P47152	169 aa		4	□□□□□ -1.77
NUP82	YJL061W	GCR2	Q01722	534 aa		4	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 14.1 ms