RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeastyeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VID28YIL017C TY1B-ER2Q03619 1755 aa4.87□□□□□ -1.63
VID28YIL017C TY1B-MR1Q04214 1755 aa4.87□□□□□ -1.63
VID28YIL017C TY1B-MR2Q04670 1755 aaKnown RBP4.87□□□□□ -1.63
VID28YIL017C TY1B-LR1Q12088 1755 aaKnown RBP4.87□□□□□ -1.63
VID28YIL017C TY1B-NL1Q12112 1755 aa4.87□□□□□ -1.63
VID28YIL017C TY1B-GR1Q12141 1755 aa4.87□□□□□ -1.63
VID28YIL017C TY1B-BLQ12490 1755 aa4.87□□□□□ -1.63
VID28YIL017C PTC3P34221 468 aaKnown RBP4.87□□□□□ -1.63
VID28YIL017C YFR006WP43590 535 aa4.87□□□□□ -1.63
VID28YIL017C YPP1P46951 817 aa4.87□□□□□ -1.63
VID28YIL017C VPS60Q03390 229 aa4.87□□□□□ -1.63
VID28YIL017C YOL087CQ99247 1116 aa4.87□□□□□ -1.63
VID28YIL017C SPT2P06843 333 aaPredicted RBP4.87□□□□□ -1.63
VID28YIL017C BUD27P43573 796 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
VID28YIL017C SIC1P38634 284 aa4.86□□□□□ -1.63
VID28YIL017C TPM2P40414 161 aa4.86□□□□□ -1.63
VID28YIL017C KIP3P53086 805 aaKnown RBP4.86□□□□□ -1.63
VID28YIL017C YNL011CP53980 444 aa4.86□□□□□ -1.63
VID28YIL017C RAD26P40352 1085 aa4.86□□□□□ -1.63
VID28YIL017C STU2P46675 888 aa4.86□□□□□ -1.63
VID28YIL017C LCD1Q04377 747 aa4.86□□□□□ -1.63
VID28YIL017C YDR090CQ03193 310 aa4.85□□□□□ -1.63
VID28YIL017C MAK21Q12176 1025 aaKnown RBP4.85□□□□□ -1.63
VID28YIL017C AUS1Q08409 1394 aa4.85□□□□□ -1.63
VID28YIL017C DNF3Q12674 1656 aa4.85□□□□□ -1.63
VID28YIL017C MPE1P35728 441 aaKnown RBP4.85□□□□□ -1.63
VID28YIL017C DJP1P40564 432 aa4.85□□□□□ -1.63
VID28YIL017C SIR4P11978 1358 aa4.84□□□□□ -1.63
VID28YIL017C ROM2P51862 1356 aaKnown RBP4.84□□□□□ -1.63
VID28YIL017C LTV1P34078 463 aa4.84□□□□□ -1.63
VID28YIL017C UBP14P38237 781 aaKnown RBP4.84□□□□□ -1.63
VID28YIL017C MED8P38304 223 aa4.84□□□□□ -1.63
VID28YIL017C IML1P47170 1584 aa4.84□□□□□ -1.63
VID28YIL017C RNT1Q02555 471 aa4.84□□□□□ -1.63
VID28YIL017C HOS3Q02959 697 aaKnown RBP4.84□□□□□ -1.63
VID28YIL017C DOP1Q03921 1698 aa4.84□□□□□ -1.63
VID28YIL017C CEP3P40969 608 aa4.84□□□□□ -1.63
VID28YIL017C YNL050CP53952 270 aa4.84□□□□□ -1.63
VID28YIL017C PRP3Q03338 469 aaPredicted RBP4.84□□□□□ -1.63
VID28YIL017C ESC2Q06340 456 aa4.84□□□□□ -1.63
VID28YIL017C YOR238WQ08634 303 aa4.84□□□□□ -1.63
VID28YIL017C MLP1Q02455 1875 aaKnown RBP4.84□□□□□ -1.64
VID28YIL017C RPO21P04050 1733 aaKnown RBP4.84□□□□□ -1.64
VID28YIL017C RAV1P47104 1357 aa4.84□□□□□ -1.64
VID28YIL017C HYR1P40581 163 aaKnown RBP4.83□□□□□ -1.64
VID28YIL017C NST1P53935 1240 aa4.83□□□□□ -1.64
VID28YIL017C CHC1P22137 1653 aaKnown RBP4.83□□□□□ -1.64
VID28YIL017C PDR11P40550 1411 aa4.83□□□□□ -1.64
VID28YIL017C KRE33P53914 1056 aaKnown RBP4.83□□□□□ -1.64
VID28YIL017C BDH2P39713 417 aa4.82□□□□□ -1.64
VID28YIL017C ECM1P39715 212 aa4.82□□□□□ -1.64
VID28YIL017C RTC1Q08281 1341 aa4.82□□□□□ -1.64
VID28YIL017C PET111P08468 800 aa4.82□□□□□ -1.64
VID28YIL017C SUI2P20459 304 aaKnown RBP4.82□□□□□ -1.64
VID28YIL017C PBY1P38254 753 aa4.82□□□□□ -1.64
VID28YIL017C MRS2Q01926 470 aa4.82□□□□□ -1.64
VID28YIL017C COG8Q04632 607 aa4.82□□□□□ -1.64
VID28YIL017C LTE1P07866 1435 aa4.82□□□□□ -1.64
VID28YIL017C NOP8Q08287 484 aaPredicted RBP4.82□□□□□ -1.64
VID28YIL017C BMS1Q08965 1183 aaKnown RBP4.81□□□□□ -1.64
VID28YIL017C SPO14P36126 1683 aa4.81□□□□□ -1.64
VID28YIL017C RRT14P40470 206 aa4.81□□□□□ -1.64
VID28YIL017C DSN1P40568 576 aa4.81□□□□□ -1.64
VID28YIL017C HPC2Q01448 625 aa4.81□□□□□ -1.64
VID28YIL017C RRP5Q05022 1729 aaKnown RBP4.8□□□□□ -1.64
VID28YIL017C ECM16Q04217 1267 aaKnown RBP4.8□□□□□ -1.64
VID28YIL017C RRP15Q06511 250 aaPredicted RBP4.8□□□□□ -1.64
VID28YIL017C RAD2P07276 1031 aa4.8□□□□□ -1.64
VID28YIL017C MSH1P25846 959 aa4.8□□□□□ -1.64
VID28YIL017C ITC1P53125 1264 aa4.8□□□□□ -1.64
VID28YIL017C YLR326WQ06170 240 aaKnown RBP4.8□□□□□ -1.64
VID28YIL017C MDS3P53094 1487 aa4.79□□□□□ -1.64
VID28YIL017C TAF13P11747 167 aa4.79□□□□□ -1.64
VID28YIL017C YDL144CQ07589 356 aa4.79□□□□□ -1.64
VID28YIL017C VMA1P17255 1071 aaKnown RBP4.78□□□□□ -1.64
VID28YIL017C DEP1P31385 405 aa4.78□□□□□ -1.64
VID28YIL017C NTE1Q04958 1679 aa4.78□□□□□ -1.64
VID28YIL017C VHR2P40041 505 aa4.78□□□□□ -1.64
VID28YIL017C RIO2P40160 425 aaKnown RBP4.78□□□□□ -1.64
VID28YIL017C RSC1P53236 928 aa4.78□□□□□ -1.64
VID28YIL017C VPS30Q02948 557 aa4.78□□□□□ -1.64
VID28YIL017C RPA190P10964 1664 aaKnown RBP4.77□□□□□ -1.65
VID28YIL017C RAD3P06839 778 aa4.77□□□□□ -1.65
VID28YIL017C MSH3P25336 1018 aa4.77□□□□□ -1.65
VID28YIL017C CBF5P33322 483 aaKnown RBP RIP-Chip data4.77□□□□□ -1.65not detected
VID28YIL017C NNF2P53253 936 aa4.77□□□□□ -1.65
VID28YIL017C ATF2P53296 535 aa4.77□□□□□ -1.65
VID28YIL017C HST1P53685 503 aa4.77□□□□□ -1.65
VID28YIL017C TFB3Q03290 321 aa4.77□□□□□ -1.65
VID28YIL017C SEC39Q12745 709 aa4.77□□□□□ -1.65
VID28YIL017C SOL3P38858 249 aa4.77□□□□□ -1.65
VID28YIL017C YVC1Q12324 675 aa4.77□□□□□ -1.65
VID28YIL017C KRE5P22023 1365 aa4.77□□□□□ -1.65
VID28YIL017C SAP190P36123 1033 aa4.76□□□□□ -1.65
VID28YIL017C CIR1P42940 261 aa4.76□□□□□ -1.65
VID28YIL017C SML1Q04964 104 aa4.76□□□□□ -1.65
VID28YIL017C BNR1P40450 1375 aa4.76□□□□□ -1.65
VID28YIL017C KEX1P09620 729 aa4.76□□□□□ -1.65
VID28YIL017C SRS2P12954 1174 aa4.76□□□□□ -1.65
VID28YIL017C CLB1P24868 471 aa4.76□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 68.9 ms