RNA–Protein interactions for RNA: YHR154W

RTT107, Transcript of Protein implicated in Mms22-dependent DNA repair during S phase, yeastyeast

Gene RTT107, Length 3,213 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT107YHR154W YOR1P53049 1477 aa3.05□□□□□ -1.92
RTT107YHR154W GUA1P38625 525 aaKnown RBP3.05□□□□□ -1.92
RTT107YHR154W CDC73Q06697 393 aa3.05□□□□□ -1.92
RTT107YHR154W MAM3Q12296 706 aa3.05□□□□□ -1.92
RTT107YHR154W POL1P13382 1468 aa3.04□□□□□ -1.92
RTT107YHR154W GDB1Q06625 1536 aa3.04□□□□□ -1.92
RTT107YHR154W GEF1P37020 779 aa3.04□□□□□ -1.92
RTT107YHR154W RPL34BP40525 121 aaKnown RBP3.04□□□□□ -1.92
RTT107YHR154W PDR10P51533 1564 aa3.04□□□□□ -1.92
RTT107YHR154W AIR1P40507 360 aaKnown RBP3.04□□□□□ -1.92
RTT107YHR154W ERG12P07277 443 aa3.03□□□□□ -1.92
RTT107YHR154W DSF2P38213 736 aa3.03□□□□□ -1.92
RTT107YHR154W MET10P39692 1035 aa3.03□□□□□ -1.92
RTT107YHR154W IQG1Q12280 1495 aa3.03□□□□□ -1.92
RTT107YHR154W BRL1P38770 471 aa3.03□□□□□ -1.92
RTT107YHR154W CHC1P22137 1653 aaKnown RBP3.03□□□□□ -1.92
RTT107YHR154W ARO1P08566 1588 aaKnown RBP3.02□□□□□ -1.93
RTT107YHR154W SLD2P34252 453 aa3.02□□□□□ -1.93
RTT107YHR154W YJL007CP47080 104 aa3.02□□□□□ -1.93
RTT107YHR154W SNQ2P32568 1501 aaKnown RBP3.02□□□□□ -1.93
RTT107YHR154W TFB3Q03290 321 aa3.02□□□□□ -1.93
RTT107YHR154W RPL34AP87262 121 aaPredicted RBP3.02□□□□□ -1.93
RTT107YHR154W DIT2P21595 489 aa3.01□□□□□ -1.93
RTT107YHR154W KEX1P09620 729 aa3.01□□□□□ -1.93
RTT107YHR154W YPR148CQ06523 435 aa3□□□□□ -1.93
RTT107YHR154W STU1P38198 1513 aa3□□□□□ -1.93
RTT107YHR154W SUB2Q07478 446 aaKnown RBP3□□□□□ -1.93
RTT107YHR154W AIM7Q12156 149 aa3□□□□□ -1.93
RTT107YHR154W MLP2P40457 1679 aa3□□□□□ -1.93
RTT107YHR154W RPP1BP10622 106 aaKnown RBP3□□□□□ -1.93
RTT107YHR154W CLA4P48562 842 aa3□□□□□ -1.93
RTT107YHR154W SNU71P53207 620 aaKnown RBP3□□□□□ -1.93
RTT107YHR154W PRT1P06103 763 aaKnown RBP2.99□□□□□ -1.93
RTT107YHR154W SSA4P22202 642 aaKnown RBP2.99□□□□□ -1.93
RTT107YHR154W ORC1P54784 914 aaPredicted RBP2.99□□□□□ -1.93
RTT107YHR154W NOP8Q08287 484 aaPredicted RBP2.98□□□□□ -1.93
RTT107YHR154W NOP53Q12080 455 aaKnown RBP2.98□□□□□ -1.93
RTT107YHR154W USO1P25386 1790 aa2.98□□□□□ -1.93
RTT107YHR154W PKC1P24583 1151 aa2.98□□□□□ -1.93
RTT107YHR154W MET22P32179 357 aa2.98□□□□□ -1.93
RTT107YHR154W TY3B-GQ99315 1547 aa2.98□□□□□ -1.93
RTT107YHR154W BIM1P40013 344 aa2.98□□□□□ -1.93
RTT107YHR154W REF2P42073 533 aaPredicted RBP2.98□□□□□ -1.93
RTT107YHR154W MAK21Q12176 1025 aaKnown RBP2.98□□□□□ -1.93
RTT107YHR154W BNR1P40450 1375 aa2.98□□□□□ -1.93
RTT107YHR154W CST6P40535 587 aa2.97□□□□□ -1.93
RTT107YHR154W TY1B-NL2Q99337 1749 aaKnown RBP2.97□□□□□ -1.93
RTT107YHR154W STH1P32597 1359 aa2.97□□□□□ -1.93
RTT107YHR154W FRK1Q03002 865 aaPredicted RBP2.97□□□□□ -1.93
RTT107YHR154W BUD20Q08004 166 aaPredicted RBP2.97□□□□□ -1.93
RTT107YHR154W CPS1P27614 576 aa2.97□□□□□ -1.93
RTT107YHR154W YPR204WQ08995 1032 aa2.97□□□□□ -1.93
RTT107YHR154W YTA7P40340 1379 aa2.96□□□□□ -1.94
RTT107YHR154W GLN1P32288 370 aaKnown RBP2.96□□□□□ -1.94
RTT107YHR154W MAK10Q02197 733 aa2.96□□□□□ -1.94
RTT107YHR154W PEX21P50091 288 aa2.96□□□□□ -1.94
RTT107YHR154W HPC2Q01448 625 aa2.96□□□□□ -1.94
RTT107YHR154W YDR444WQ04093 687 aa2.96□□□□□ -1.94
RTT107YHR154W ENV9Q08651 330 aa2.96□□□□□ -1.94
RTT107YHR154W ATG32P40458 529 aa2.95□□□□□ -1.94
RTT107YHR154W YAP3P38749 330 aa2.95□□□□□ -1.94
RTT107YHR154W YRR1Q12172 810 aa2.95□□□□□ -1.94
RTT107YHR154W HAP1P0CE41 1502 aa2.95□□□□□ -1.94
RTT107YHR154W CDC4P07834 779 aa2.95□□□□□ -1.94
RTT107YHR154W NUP157P40064 1391 aaKnown RBP2.94□□□□□ -1.94
RTT107YHR154W SSA2P10592 639 aaKnown RBP2.94□□□□□ -1.94
RTT107YHR154W CDC3P32457 520 aaKnown RBP2.94□□□□□ -1.94
RTT107YHR154W CSN12P47130 423 aa2.94□□□□□ -1.94
RTT107YHR154W YMR196WQ04336 1088 aa2.94□□□□□ -1.94
RTT107YHR154W SPT16P32558 1035 aaKnown RBP2.94□□□□□ -1.94
RTT107YHR154W RRN6P32786 894 aa2.94□□□□□ -1.94
RTT107YHR154W RAD54P32863 898 aa2.94□□□□□ -1.94
RTT107YHR154W YBL036CP38197 257 aa2.94□□□□□ -1.94
RTT107YHR154W VHR2P40041 505 aa2.94□□□□□ -1.94
RTT107YHR154W NUP42P49686 430 aaKnown RBP2.94□□□□□ -1.94
RTT107YHR154W SEC7P11075 2009 aaKnown RBP2.94□□□□□ -1.94
RTT107YHR154W NPL4P33755 580 aa2.93□□□□□ -1.94
RTT107YHR154W LAM6Q08001 693 aa2.93□□□□□ -1.94
RTT107YHR154W BRN1P38170 754 aa2.93□□□□□ -1.94
RTT107YHR154W HAT1Q12341 374 aa2.93□□□□□ -1.94
RTT107YHR154W MRX12P47084 519 aa2.93□□□□□ -1.94
RTT107YHR154W ISM1P48526 1002 aa2.93□□□□□ -1.94
RTT107YHR154W GCD11P32481 527 aaKnown RBP2.92□□□□□ -1.94
RTT107YHR154W RTT106P40161 455 aa2.92□□□□□ -1.94
RTT107YHR154W STR2P47164 639 aa2.92□□□□□ -1.94
RTT107YHR154W YLR326WQ06170 240 aaKnown RBP2.92□□□□□ -1.94
RTT107YHR154W RTG2P32608 588 aaKnown RBP2.91□□□□□ -1.94
RTT107YHR154W URN1Q06525 465 aaKnown RBP2.91□□□□□ -1.94
RTT107YHR154W NUD1P32336 851 aa2.91□□□□□ -1.94
RTT107YHR154W KIC1P38692 1080 aa2.91□□□□□ -1.94
RTT107YHR154W TIF1P10081 395 aaKnown RBP2.91□□□□□ -1.94
RTT107YHR154W PCS60P38137 543 aaKnown RBP RIP-Chip data2.91□□□□□ -1.94 RIP-Chip
RTT107YHR154W MTC5Q03897 1148 aa2.9□□□□□ -1.95
RTT107YHR154W HEM3P28789 327 aa2.89□□□□□ -1.95
RTT107YHR154W UBP14P38237 781 aaKnown RBP2.89□□□□□ -1.95
RTT107YHR154W TUM1Q08686 304 aaKnown RBP2.89□□□□□ -1.95
RTT107YHR154W TYW1Q08960 810 aaKnown RBP2.89□□□□□ -1.95
RTT107YHR154W BDP1P46678 594 aa2.89□□□□□ -1.95
RTT107YHR154W YNL108CP53929 270 aa2.89□□□□□ -1.95
RTT107YHR154W YBT1P32386 1661 aa2.89□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms